Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB2500
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Entry
YPTB2500 CDS
T00195
Symbol
ypsR
Name
(GenBank) quorum-sensing transcriptional activator YpeR
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPTB2500 (ypsR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yps03000
]
YPTB2500 (ypsR)
Transcription factors [BR:
yps03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
YPTB2500 (ypsR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_10
HTH_28
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CAH21738
UniProt:
Q669I5
LinkDB
All DBs
Position
complement(2950220..2950957)
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AA seq
245 aa
AA seq
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MIINFFDNESINEDIKNYIQRRIKAYGNIRYSYLLMNKKVPLHPAIISNYPLDWVKKYKK
NSYHLIDPVILTAKGKVAPFAWDDNSVINIKSTDSAVFNLAREYNIVNGYTFVLHDNNNN
MATLNVSSGDDDSIFFDESIEVNKEKIQMLLIFIHDKMLGLYNKSHHENNTLNKKENKRE
IFSPRENEILYWASVGKTYSEIAIILGIKKSTVKFHIGNIVRKLGVLNAKHAIRLGIELQ
LIKPI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgataattaatttttttgataatgaaagcattaatgaagatataaaaaattatatccaa
cggaggataaaagcctatggcaatatccgctattcttatttgctaatgaataaaaaagta
ccgctacatccggcgatcatatcgaactacccactagactgggtaaaaaagtacaagaag
aatagttatcacctgatcgaccctgtgattttgaccgccaaaggcaaagtcgcgccattt
gcatgggatgacaattcagtcatcaatataaaatcaactgattcggccgtgttcaatctc
gccagagaatataatattgttaatggttataccttcgttcttcatgataataacaataat
atggcgaccttgaatgtttcaagtggcgatgatgatagtatttttttcgatgaaagcatc
gaggtgaacaaagaaaaaatacaaatgttacttatttttattcacgataaaatgcttggt
ctatataataaaagtcatcatgaaaacaacacgttgaataaaaaagagaataaaagagaa
attttctctcctcgggaaaatgaaattctgtactgggccagtgtaggaaagacttactct
gaaattgcgataattttaggtattaagaaaagcacagtgaaatttcatattggtaatatt
gttaggaagttaggtgttctcaatgccaaacatgcaataagacttggcattgagttacaa
ttgatcaaacctatttag
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