Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_3466
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Entry
YPK_3466 CDS
T00665
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypy03016
]
YPK_3466
Enzymes [BR:
ypy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
YPK_3466
Transfer RNA biogenesis [BR:
ypy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
YPK_3466
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACA69733
UniProt:
A0A0H3B7S7
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All DBs
Position
3808661..3809236
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AA seq
191 aa
AA seq
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MTNTVDELKRVRRLFFALTLPDAMQQEIVQWRAGHFSPEAGRPVAAANLHLTLAFLGEVS
ATKAQVLQQQAGRIQQAGFSVTLDDIGHWPGSGVIWLGCKNPPRGLLQLAQLLRSQAARS
GCYQTPLPFHPHVTLLRNATRPVALPAKSGNETFQADHFSLYESVFARGRTRYNIVQSWP
LAGSERKPDAC
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataccgttgacgaattaaaacgtgtccgccgcctattctttgccctgacactg
ccggatgccatgcaacaagagattgtgcaatggcgagctggtcatttctcgccagaggcg
ggtcgccctgtcgcggcggcgaatctgcacctgacactggcgttccttggtgaagtcagt
gcgacaaaagcccaggtgttacagcagcaagccgggcgtatccaacaagcaggtttcagc
gtgacattagatgatatcggccattggcccggttccggcgtgatttggctgggatgtaag
aacccccctcgtggcctgttgcaattggcgcagttgctgcgctcccaggcagcacgtagt
ggctgttatcaaacgccgctgccgtttcatccccatgttactctgttgcgtaacgcaacc
cgcccagtggcattacctgccaagagcggcaatgagaccttccaggcggaccatttctcg
ctgtatgaatcggtcttcgcgcggggccgcacccgctataacatcgtacaaagctggccg
ctggctggcagtgaaaggaaaccagatgcctgctaa
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