Yersinia rohdei: CH64_1446
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Entry
CH64_1446 CDS
T03610
Name
(GenBank) deoR-like helix-turn-helix domain protein
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_1446
Transcription factors [BR:
yro03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CH64_1446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_PafC
HTH_11
MarR
HTH_IclR
Put_DNA-bind_N
GntR
FokI_D3
FeoC
DsrD
HTH_24
HTH_Mga
DUF3731
SpoIIID
HerA_C
HTH_5
HTH_AsnC-type
FaeA
HTH_20
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AJJ12444
UniProt:
A0A0U1HUX7
LinkDB
All DBs
Position
1603960..1604730
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AA seq
256 aa
AA seq
DB search
MKPKQRQVAILEYLQQHGKTAVDQLAEHFSTTGTTIRKDLTSLEHEGAVIRTYGGVVLNR
DDIEQPIDRKTHINTEKKKQIAKAASKLIKDGDSLVFDAGSTVLQMVPHLTQFNNITVMT
NSLHIVNELVELDNDQTILMPGGTYRKGSASFHGSLAESAFDKFSFDKLFIGADGVDLNA
GVTTFNEVYHVSTAMCHAASRIILLVDSSKFGRKSPNVVCALSAVDTLITDKGISDEYLQ
ALQDKGINIILVDKDD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaagcagcgacaagtcgctatcctggaatatctccagcaacacggtaaaacg
gcagtcgatcaactcgccgagcatttttcaactacgggcaccactatccgtaaagattta
accagtctagaacatgaaggggcggtgatccgcacttacggaggggtggtcttaaatcgc
gacgatattgagcaacccattgatcgtaaaacgcatattaataccgaaaagaaaaaacaa
attgctaaagctgccagtaaattgattaaagacggtgatagcctggtttttgatgccggc
agcaccgtactgcaaatggtgccgcacctgacacaattcaacaatattacggtgatgacc
aacagtttgcatatcgtcaacgaactggttgagttggataacgatcagacaatcttgatg
ccgggcgggacttaccgtaaaggctccgcctcttttcatggtagcctggcagaatctgct
tttgataagtttagttttgataagctgtttattggcgcagatggtgttgatcttaatgcc
ggtgtcaccacgtttaacgaagtttatcatgtcagcaccgcgatgtgtcacgccgccagt
cgcatcattctcctggtcgattcttccaaatttggccgtaaaagcccaaatgttgtatgc
gcactcagtgccgtcgataccctgattacagataaaggtatcagtgacgaatacttgcag
gcactacaggataagggcattaacatcattctggttgataaagatgactaa
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