KEGG   Yersinia rohdei: CH64_3554
Entry
CH64_3554         CDS       T03610                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
yro  Yersinia rohdei
Pathway
yro00740  Riboflavin metabolism
yro01100  Metabolic pathways
yro01110  Biosynthesis of secondary metabolites
yro01240  Biosynthesis of cofactors
yro02024  Quorum sensing
Module
yro_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:yro00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CH64_3554 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CH64_3554 (ribD)
Enzymes [BR:yro01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CH64_3554 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CH64_3554 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AJJ12087
LinkDB
Position
4005226..4006335
AA seq 369 aa
MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHQRAGEPHAEVHALRMA
GEKAQGATAFVTLEPCSHHGRTPPCADALVAAGVVRVVAAMQDPNPEVAGRGLYKLKQAG
IDVNHGLMLAEAEAANLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQD
VQRFRAESSAILSTSATVLADDPALTVRWQALDAETQALYPEDKLRQPIRIILDSHNRVT
PEHKVTQQDGPCWLARVEADTQPWPANVEQLLLPRHGNGVDLVLLMMQLGKRQINSVWVE
AGPQLAGALLQAGVVDELILYIAPKLLGTDARGLCQLAGLTHLLQAPEFVFSEVRQVGPD
LRLRLKPKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcaacccgatgaattctatatggcccgcgcctttgagttggcgcggttggggcgtttt
accacgtcacccaaccctaatgtcgggtgtgttttggtgcgggatggtgagattgttggt
gaaggttatcaccagcgagctggcgagcctcatgccgaagtgcatgccttgcgcatggcg
ggtgagaaagctcagggggcgacggcttttgtcactcttgagccatgcagccaccacggg
cggacacctccttgtgccgatgccttggttgccgccggtgtggttcgcgtagttgctgcg
atgcaagaccctaacccagaagttgccgggcgtgggttatataaactgaaacaggccggg
atcgacgtcaatcacggcctgatgctcgcagaggccgaagccgccaatctgggttttcta
aagcggatgcgtaccggttttccttatctgcaattaaaaatggcagcatcattggatggc
cgaacggcgatggcttcaggtgaaagccagtggattacctcgccgcaggcccgccaggat
gtgcagcgctttcgtgccgaaagctccgcgattctcagtaccagcgccacagtattagcg
gatgatcctgcgctgacggtgcgctggcaggcgttagatgctgaaacccaagccctatat
cccgaagacaagctgcgccagccgatacgcattattctcgatagccataaccgcgtgacg
ccagagcacaaagtcacacagcaagatggcccatgctggttggctagagtcgaggctgat
acacagccgtggcctgctaatgttgaacaattattgctgcctcgccatggtaatggcgtg
gatttggttttattgatgatgcaactgggcaagcggcaaattaactcagtttgggttgaa
gccgggccacaactggccggtgccttgttacaggcgggtgtggtcgatgagttaattctt
tatatcgcgcctaaactgttggggactgatgcccgtggattatgtcagttggcgggatta
acccatttattgcaagccccagagtttgtatttagtgaggtacgccaggttgggccagat
ctgcgcttgcgcttgaaacctaagtattaa

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