Yersinia ruckeri YRB: BD65_2386
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Entry
BD65_2386 CDS
T03611
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00230
Purine metabolism
yru00240
Pyrimidine metabolism
yru01100
Metabolic pathways
yru01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BD65_2386 (nrdD)
00240 Pyrimidine metabolism
BD65_2386 (nrdD)
Enzymes [BR:
yru01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
BD65_2386 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_Tnp_IS91
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AJI96710
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All DBs
Position
complement(2601081..2603219)
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AA seq
712 aa
AA seq
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MKPVVIKRDGCQVPFDEVRIKEAVERAALAVDVVDADYCATVARVVAQKMEKLAQVDIRE
IQEAVENQLMAGDYKQLARAYIEYRHDRDVSRELRGRLNQEIRGLVEQSNMALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
DGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVTESF
KKNQKVAEEWQIPDARGYAMARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTC
WESRMIQEAILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKYGDPNYDIKQLALECATKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGVYEENGEQIHDGRNNLGVISLNLPRIALESQ
GDEKRFWLLLDERLLLAKKALMTRIARLEGIKARVAPILYMEGACGVRLQADDNISEIFK
NGRASISLGYIGIHETVNALFGNQTHVFDDQQLREKAIAIVSRLKDATDSWKDETGYAFS
LYSTPSENLCDRFCRLDTAEFGIVPGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ANGGFICYGEYPNLQHNLKALEDVWDYSYHRVPYYGTNTPIDECYECGFTGEFSCTSKGF
TCPKCGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLASGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtagtgattaaacgggacggttgtcaggtaccttttgatgaggtgcgcatt
aaagaagccgtggaacgagcagcattagctgttgacgttgtggacgcggattattgtgca
accgtcgcccgcgtggtcgctcaaaaaatggaaaaactggcgcaggtggatatccgcgaa
attcaagaagcggtagaaaaccaacttatggcgggtgactataaacaactggcgcgtgcc
tatatcgaataccgccacgatcgcgatgtgtcccgtgagttacgcggtcgcctaaaccaa
gagatccggggtttggtcgagcaaagcaatatggctctgctcaatgaaaatgccaataaa
gacagcaaagtgattcctacccaacgggatttgctggccggtattgtggccaaacactac
gccaaacagcatattttgccacgcgatgtggtattggctcacgaacgtggcgaaattcac
taccacgatctggattactcgcctttcttcccgatgttcaactgtatgttgattgatttg
gatggcatgttaacccagggtttcaaaatgggtaacgccgaaattgaaccgccaaaatcc
atttccactgcaacagcggtgacagctcaaattatcgcgcaggtggccagccatatttat
ggtggcaccacgattaaccgcattgatgaaatactcgcgcctttcgtcactgaaagtttt
aaaaaaaatcagaaagttgccgaagaatggcagattcccgatgcccgaggctatgccatg
gcgcgcaccgaaaaagaatgttacgacgctttccaatcgctggaatatgaagtcaacacg
ttgcataccgctaatggacagactccctttgtaaccttcggtttcggtttggggacctgc
tgggaatcccgcatgattcaggaagcgattttgcgtaatcgcattgccggtttaggcaaa
aaccgcaaaacggcggtgttccctaaattggtatttgccatccgtgatggcctgaatcat
aaatacggcgatccgaattacgatatcaaacagctggctctggaatgtgctactaagcgc
atgtatcccgatattctcaattacgatcaggtggttaaagttactggttcatttaaaact
ccgatgggttgccgtagcttccttggggtttatgaagaaaatggcgagcagattcacgat
ggtcgcaacaaccttggcgtgattagcctgaacctgccacgtattgcgttggaatcacag
ggcgatgaaaaacgcttctggctgttgctggatgaacgtttattgctggcgaaaaaagca
ctgatgacacgtattgcacgtttggaaggcatcaaagctcgggttgcacctatcttatat
atggaaggtgcctgcggtgtacgcctgcaagccgatgataatatttcggagatattcaag
aatggccgagcgtcgatttcacttggctatattggcatccacgaaacggtcaatgcgctg
tttggcaatcaaacccatgtttttgatgatcaacagctacgtgagaaagccatcgccatc
gtgtcacgcctgaaagatgccaccgatagctggaaagatgaaactggctatgcttttagc
ctatacagcacgccaagtgaaaacttgtgtgaccgtttctgccgtctggatacggccgaa
tttggtattgtccctggcgtcacagataaaggttactacaccaacagcttccatttagac
gtagagaaaaaggttaatccatacgacaaactggattttgaagccccttatcctcctctg
gctaacggcggttttatttgctacggcgaatatccaaacctacagcacaacctgaaagcg
ctagaagacgtatgggattacagctatcaccgcgtgccttactatggtactaacacgccg
atagatgaatgctacgaatgtggcttcactggtgagttttcctgtaccagcaaaggcttt
acctgcccaaaatgtggcaaccatgaaccttccaaagtttcggttacccgtcgagtgtgt
ggctaccttggaagcccggatgcacgcccattcaacgcgggtaagcaggaagaagtgaaa
cgtcgggtcaagcatctggctagcggccaattgggctaa
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