Zalophus californianus (California sea lion): 113910930
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Entry
113910930 CDS
T07874
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04151
PI3K-Akt signaling pathway
zca04510
Focal adhesion
zca04512
ECM-receptor interaction
zca04611
Platelet activation
zca04820
Cytoskeleton in muscle cells
zca04926
Relaxin signaling pathway
zca04933
AGE-RAGE signaling pathway in diabetic complications
zca04974
Protein digestion and absorption
zca05146
Amoebiasis
zca05165
Human papillomavirus infection
zca05205
Proteoglycans in cancer
zca05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113910930 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113910930 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113910930 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113910930 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
113910930 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
113910930 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
113910930 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
113910930 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
113910930 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
113910930 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
113910930 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
113910930 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zca00536
]
113910930 (COL1A2)
Glycosaminoglycan binding proteins [BR:
zca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113910930 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
113910930
NCBI-ProteinID:
XP_027428797
EnsemblRapid:
ENSZCAG00025016714
UniProt:
A0A6J2BEV1
LinkDB
All DBs
Position
12:37055115..37090667
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AA seq
1367 aa
AA seq
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MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPAGDRGPRGERGPPGPPGRDGDDGMPG
PPGPPGPPGPPGLGGNFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGN
PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGEGGN
KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSTGPSGPPGLRGGPGSRGLPGADGRAGVMGP
PGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP
IGPAGARGEPGNIGFPGPKGPTGDPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPGGLPGERGAAGIPGGKGEKGE
TGLRGEVGNPGRDGARGAPGAVGAPGPAGATGDRGEAGTAGPAGPAGPRGSPGERGEVGA
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGAHGP
PGFAGEKGPSGEPGTAGPPGTAGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEPGPLGI
AGPSGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGA
VGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAAGPRGPSGPQGVRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGV
RGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIRAQPENIPAKNWYRNSKVKKHIWLGETINGGTQFEYNAEGVTTKEMATQLAFMRL
LANHASQNITYHCKNSIAYLDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSK
KTNEWRKTIIEYKTNKPSRLPILDIAPLDIGDTDQEFRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacgtcgtgcctagca
acatgccaatctttacaagaggcaactgcaagaaagggcccagccggagatagaggacca
cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgacggtatgccaggc
cctccaggtccacctggccctcctggcccccccggtcttggcgggaattttgcggctcag
tatgatcctggaaaaggagttggccttggccctggaccaatgggtttgatgggacctcga
gggccacctggtgcgtctggagctcctggccctcaaggtttccaaggacctgctggtgag
cccggtgaacctggtcaaactggtcctgcgggtgctcgtggtccacctgggcctcctggc
aaggctggggaggatggtcaccctggcaaacctggacgacctggtgagagaggagttgtt
ggaccacagggtgctcgtggtttccctgggactcctggacttcctggcttcaagggcatc
aggggacacaatggtctggatggattgaagggacagcccggagctccaggtgtgaagggt
gaacccggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcct
ggtgagagaggacgcgtcggtgcccctggtccagctggtgcccgtggaagtgatggaagt
gtgggtcctgtgggtcctgctggtcccattgggtctgctggccctccaggctttccaggt
gctcctggccccaagggtgaactcggacctgtgggcaaccctggtcctgccggtcccgcg
ggcccccgcggtgaagtgggtcttccgggtgtctccggccccgttggacctcctggtaac
cctggagccaacggcctgactggtgctaagggtgctgctggcctgcccggtgtggctggg
gctcccggcctccctggaccccgcggaattcctggccctgttggcgctgctggtgctact
ggggccaggggactcgtcggtgagcctggtccagctggttccaaaggagagggcggcaac
aagggtgagcccggctctgctgggccccaaggtcctcccggtcccagtggcgaagaagga
aagagaggccccaatggtgaagccggatccactggcccctctggacctcctgggctgaga
ggaggtcctggttctcgtggtcttcctggagctgacggcagagctggtgtcatgggccct
cccggcccccgtggtgcaactggccctgctggtgtccgaggtcccaatggagattctggt
cgccctggagagcctggcctcatggggccccgaggttttcctggtgcccctggaaatgtt
ggcccagctggtaaagaaggtcccatgggcctccctggtattgatggcaggcctggtcca
attggcccagctggagcaagaggagagcctggcaacatcggattccctggacccaagggc
cccaccggtgatcctggcaaagctggtgagaaagggcatgctggtcttgctggtgctcgg
ggtgctccaggtcctgatggaaacaatggtgctcaggggcctcctggaccacagggtgtc
caaggtggaaaaggtgaacaaggtcccgctggtcctccaggcttccagggtctgccgggc
cccgcaggtacagctggtgaagctggcaaaccaggagaaaggggtctcccgggtgaattt
ggtctccctggtcccgctggtccaagaggggagcgtgggccccctggagaaagtggtgct
gctggtccttctggtcctattgggagccgaggtccttctggaccccctgggcccgatgga
aacaagggtgaacctggtgtgcttggtgctccgggcaccgcgggtccatctggtcccggt
ggcctgccaggagagaggggtgctgccggcatacctggaggcaagggagaaaagggtgaa
actggtctcagaggggaagttggtaacccaggcagagatggtgcccgtggtgcccctggt
gctgtgggtgcccctggtcctgctggagccactggtgaccggggtgaagccggtactgcc
ggtcctgccggtcctgccggtcctcgaggtagccctggtgaacgtggtgaggtcggtgcc
gctggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaagga
gagagaggaaccaaagggcccaagggtgaaaatggtcccgtcggtcccaccggccccgtc
ggatctgctggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgat
ggtggcccccctggtgctactggttttcctggcgctgctggacggactggtcctcctggg
ccctctggtatcaccggcccccctggtccccctggcgctgctggtaaggaaggactccgt
gggcctcggggtgaccaaggtccagttggccgaacaggagaaaccggcgcacatggtccc
cccggctttgccggcgagaagggtccctctggagagcccggtaccgctggccctcctggc
accgcaggtcctcaaggtctccttggtgctcctggcattctgggtctcccaggctctcga
ggtgaacgtggtctaccaggtgtttctggatctgtgggtgaacccggacctctcggcatc
gctggcccgtctggggctcgtgggccccccggggctgtgggcgcacccggagtgaacggc
gctcctggcgaagctggtcgtgatggcaaccctgggaacgatggccccccaggccgcgat
ggtcaacccggacacaagggagagcgtggttaccctggcaacatcggtcccgttggcgct
gtgggcgcacctggtcctcacggccccgtgggtcccactggcaaacacggaaaccgtggt
gaacccggtcctgctggttctgtgggtccagtcggtgctgccggcccaagaggccctagt
ggcccacaaggtgttcgaggtgataagggagagcctggtgacaaggggcccagaggtctt
cctggcttaaagggccataatggactgcaaggtcttcctggtctcgctggtcaacatggc
gatcaaggtgcacctggttctgtggggcctgccggtcctaggggccctgctggtccttcc
ggccctgctggcaaggacggtcgcaccggacatcccggtacagttggccctgctggcgtc
cgtggctctcaggggagccaaggtcctgctggccctcccggcccccctggtcctcctggc
cctcctggcccgagtggtggcggctatgactttggttatgaaggggacttctacagggct
gaccagcctcgctcaccaccttctctcagacccaaggattatgaagttgatgctactctg
aaatccctcaacaaccagatcgagacccttcttactcctgaaggctctaggaagaaccca
gctcgcacatgccgtgacttgagactcagccacccagagtggagcagcggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggtgaaacctgcatccgggctcaacctgaaaacatcccagccaagaactggtacagaaat
tccaaggtcaagaagcacatctggttaggagaaactatcaatggtggtacccagtttgaa
tataatgctgaaggagtaaccaccaaggaaatggccactcaactcgccttcatgcgcctg
ctggccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcctacctg
gatgaggagactggcaacctaaagaaggctgtcattctgcaaggctccaatgatgttgaa
ctggttgccgagggcaacagcaggttcacctacactgttcttgtagatggctgctctaaa
aagacgaatgaatggagaaagacaatcattgaatacaaaacaaataagccatcccgcctg
cctatccttgatattgcacctttggacatcggtgatactgaccaagaattcagggtggac
gttggccccgtctgtttcaaataa
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