Zalophus californianus (California sea lion): 113913941
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Entry
113913941 CDS
T07874
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03015
mRNA surveillance pathway
zca03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113913941 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113913941 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113913941 (CPSF7)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
113913941 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
113913941
NCBI-ProteinID:
XP_027434269
EnsemblRapid:
ENSZCAG00025018018
UniProt:
A0A6J2BWX8
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Position
11:complement(103293544..103318479)
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AA seq
471 aa
AA seq
DB search
MSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPS
PKPNNKSPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRV
PRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP
PIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPN
ATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEEIMKRNRAISSSAISKAVSGAS
AGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKR
HRSRERSPSRSRESSRRHRDMLHNEERHDDYFQERNREHERHRDRERDRHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagtggacttgattgatatatatgctgacgaggagttcaatcaggaccca
gagttcaacaatacagatcagattgacctgtatgatgacgtgttgacagccacctcacag
ccctcagatgacagaagcagcagcactgagccaccacctcctgttcgccaggagccgtct
cccaagcccaataacaagagtcctgcgatcctgtacacgtacagcggcctccgcaatagg
cgagctgctgtctatgtgggcagcttctcctggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaatcgagca
aatggccagtccaaagggtatgctgaggtggtggtagcctctgaaaactctgtccacaaa
ttgttggaactccttccaggaaaagttcttaatggagaaaaagtggacgtgaggccggcc
acccggcagaacctgtcacagtttgaggcacaggctcggaaacgtgagtgcgtccgagtc
ccaagagggggaatacctccacgggcccattcccgggattctagtgattctgctgatgga
cgggccacaccctctgagaaccttgtaccctcatctgcccgtgtggataagccccccagt
gtgctgccctacttcaatcgccctccttcagccctccccctgatgggtctgcccccaccc
ccaattccacccccacctcctctctcctcaagctttggggtccctcctcctcctcctggc
atccactaccagcatctcatgccccctcctcctcgattacctcctcatctggctgtacct
ccccctggggccatcccacctgcccttcacctcaatccagccttcttccccccaccaaat
gctacagtggggcctccaccagatacttacatgaaggcctcagcaccctataaccaccat
ggcagccgagattcgggccctccgccctctacagtgagtgaagcagaatttgaagagatc
atgaagcgaaatagagcaatttccagcagtgccatttccaaagcggtatctggagccagt
gcaggggattacagtgacgcgattgagacgctgctcacagccattgctgttatcaaacag
tcccgggtcgccaatgatgagcgttgccgtgtcctcatctcctctcttaaggactgtctt
catggcattgaagccaagtcctacagtgtgggtgccagcgggagctcgtccaggaagaga
caccggtcccgagagcgatcgcctagccggtcccgggagagcagtaggaggcaccgggac
atgcttcataacgaagagcggcatgatgattacttccaggaaaggaaccgggagcacgag
agacaccgggatagagaacgggaccggcaccactga
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