Zalophus californianus (California sea lion): 113920045
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Entry
113920045 CDS
T07874
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zca01002
]
113920045 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113920045 (USP40)
Enzymes [BR:
zca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113920045 (USP40)
Peptidases and inhibitors [BR:
zca01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113920045 (USP40)
Ubiquitin system [BR:
zca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113920045 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
113920045
NCBI-ProteinID:
XP_027445981
EnsemblRapid:
ENSZCAG00025003226
UniProt:
A0A6J2CRE1
LinkDB
All DBs
Position
3:complement(188576876..188653326)
Genome browser
AA seq
1249 aa
AA seq
DB search
MCVSNVGLGRLVGLGFRQVGSSFTMFGDLFEEDYSSVSNYEYGKEKKLKTKALEPPAPRE
FTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGSFEDKDKPDAKVRIIPLQ
LQRLFAQLLLLDQDAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHD
LINRLYHGTVVNQVVCKECKNVSEKQEDFLDLTVAVKNVSGLEDALWTMYVEEEMFDCDN
LYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKRERYKETSCYTFPLRINLKPF
CEQSDLDDLEHVYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQSQEEKSKPDVNLKDLQ
NEEEIDDDPLIILKVILLQEENNVIPVDQLGQKLLKKIGTSWNKKYRKQYGPLRKFLQLH
SQVFLLSSDESTVSLLKNGSLRAESDFQRNDQHVFKTLTSESPGLNDRNSCPHWFDINDS
KVQPIKEKDIERQFQGKESAYMLFYRKSQLQRPPEARANPRYGVPRHLLNEMDAANIELQ
TKRAEWDSTNNNFELHLHLGPHYHFFNGALHPIISQAESVWDLTFDKRKTLGDLRQSIFQ
LLDFWEGDMVLSVAKFVPAGLHVYQMLDGDDMMLCEMEIADGEDLFVWNGVEVGGIQIPT
GSDCEPLLLNVLHLATSSEGEKCQQLVESPHVFPSNAEVGAVLTTLAVPVGVLFVNATDP
AGGENWVAVPKEDLKKTFREQGLRNKSLVLVQDSRDNSLLLKQGKWFTGMNEINWLQVQN
LCELESEEKQVKISATVNTVVFDLRIKAIKELKLMKELAENSCLRPIDRNGKLLCPVPDG
YTLKEAELKMGSSLGLCPGKAPTSSQLFLFFTMGSDVQPGTEMEIIVEETISVRDCLKLM
LEQSGLPGDTWHLRKMDWCYEAGEPLCEEDATLRELMICSGDTLLLIEGKLPPPGFLKVP
VWWYQPRGPAGHWKSHPDQRSGTPSPGGVWRAASTQGAPGDLHGEVSLRYLGDLEISEDA
TVAELKSQAMTLSPSSGFVIPSPAFLRAWTLESQRPGRLLRTNRQQLKEYRLGRKTEICL
EPLQKEENLGPQDVVLRTQMRLPGERAYAPCVDLVWDTARGWTAGSLRQRVAHFCSLPVE
KIEIAKYFPEKFEWLPISSWNQQLTKRKKKKKQDNLQGAPYYLKDGDTIGIKNLLVEDDE
DFSTVADDLGKKSQEALRVQSSDLFSSAKTPSRPRAPEASLSIHVGSFR
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtttcgaatgtgggcctgggccggctcgtggggctgggctttaggcaggtaggc
tctagtttcacaatgtttggggatctatttgaagaagattattccagtgtgtcaaattat
gagtatggaaaagagaagaaattaaagaccaaagctttggagccaccagctcctagagaa
ttcaccaatttaagcggaattagaaatcagggtggaacctgttacctcaattcccttctt
cagactcttcatttcacacctgaattcagagaagctttattttcccttggcccagaagag
cttggttcgttcgaagataaggataaacctgatgcaaaggttcggatcatacctttacag
ttacaacggttgtttgcccagcttctgctcttagaccaggatgcagcatccacagcagac
ctcactgacagcttcgggtggaccagcaatgaggaaatgaggcaacatgatgtgcaggaa
ctgaatcgaattctctttagtgctttggaaacctctttagtcgggacctccggccatgac
ctcatcaatcgtctgtatcatggaaccgttgttaaccaggttgtttgtaaagagtgtaag
aatgtcagtgaaaagcaggaagacttcttagatctaacagtagcagtaaaaaatgtgtca
ggtttggaagatgccctctggaccatgtatgtagaagaggaaatgtttgactgtgacaac
ttataccactgtgggacttgtgacaggctggttaaagctgccaagtcggccaaattacgt
aagctgcctccctttcttactgtttcattattaagatttaattttgattttgtgaagcgt
gaacgatacaaggaaactagctgttacacgttccctctccggatcaatctcaagcctttt
tgtgaacagagtgacttggatgacttggagcatgtatatgatcttttctcggttattata
cataaaggtggttgctatggaggacattaccacgtgtatattaaagatgttgatcatctg
ggaaactggcaatctcaggaggagaaaagcaaaccagatgtgaatttaaaagatctccag
aatgaagaagagattgacgatgatccactgataattctgaaagtgatcttactacaggag
gagaataatgtaattcctgttgatcagctgggccagaaactcttgaaaaagataggaacg
tcttggaacaagaagtacagaaaacagtatggaccactgcgaaagttcttacagcttcat
tcccaggtatttctgctcagttcagatgaaagtacagttagtctattgaagaacggttct
ctccgggctgagtctgatttccaaaggaatgatcaacacgttttcaagacacttacttca
gaatccccaggattaaatgatagaaactcctgtccccactggtttgatataaatgattcc
aaagtccaaccaatcaaggaaaaagatattgaacggcagtttcagggtaaagaaagtgcc
tacatgttgttttatcggaaatcccagttgcagagacccccagaagctcgagctaatcca
agatacggggttccacgtcatttgctgaatgaaatggacgcagccaacattgaactgcaa
acaaaaagggcagaatgggattctacaaacaataattttgagttgcatctccacctgggt
cctcattatcatttcttcaatggggctctgcacccaatcatctctcaagcagaaagcgtg
tgggatttaacctttgataaaagaaaaactttaggagatcttcgacagtcaatatttcag
ctgttagatttttgggaaggagatatggttcttagtgtggcaaagtttgtaccagcagga
ctgcatgtttaccagatgcttgatggggatgacatgatgctgtgtgaaatggagattgcg
gacggggaagacctctttgtatggaatggggtggaggttggtggcatccagattccaacc
gggagtgactgcgaacctctgctcttaaacgttcttcatttagcaacaagcagcgagggg
gaaaagtgtcagcagttggtagagtctccacacgtctttccatctaatgcagaagtgggc
gccgtgctcaccaccctggcggtgcccgtgggtgtcctcttcgtcaacgccacggaccct
gccgggggagagaactgggtcgctgttcccaaggaagacctgaagaagacgttcagagag
cagggcctcaggaacaagagcttggttctcgttcaggattctagagataacagtttgttg
ctcaaacaagggaaatggttcactggtatgaatgagatcaactggctccaagttcaaaat
ttatgtgaattagaatccgaagagaagcaagttaaaatatcagcaactgtgaacacagtg
gtgtttgatcttcgaattaaagccataaaggaactaaaattaatgaaggaactagctgag
aacagctgtttgagacctattgacagaaatgggaagctgctttgtccagtgccagacggg
tacactttgaaggaagcagaactgaagatggggagttcactgggactgtgtcctggaaaa
gcaccaacttcctctcagctgttcctgtttttcactatggggagtgatgttcagcctggt
acagagatggagatcatagtagaagaaacaatatctgtgagagattgtttgaagctcatg
ctggagcagtctggcctaccaggagacacgtggcatttacgaaaaatggactggtgttac
gaagctggagagcctttatgtgaagaagacgcaaccctgagagaacttatgatatgctct
ggagatactttgcttttaattgaaggaaaacttccccctccgggtttcctgaaggtgccc
gtctggtggtaccagcctcgggggcccgcgggtcactggaagagtcatccggaccagagg
agcggtaccccttctccaggtggggtctggagggctgcttccacccaaggcgctcctggt
gacctgcacggggaggtttccctccgctacctgggggacctcgagatctccgaagatgcc
accgtggcggagctgaagtcccaggccatgaccttgtccccctcttcggggtttgtcatc
ccgtccccagccttcctcagagcctggaccttggagagccagcgccccggcaggctctta
cgaaccaaccggcaacagctcaaggaatacagactgggaaggaaaactgagatctgctta
gagccccttcagaaagaagaaaatttgggcccccaggacgtggtgctgaggacgcagatg
cgcctccccggcgagagggcctacgccccgtgtgtggacctggtgtgggacacggcccga
ggctggacggctggctccctgaggcagcgagtcgcccacttctgctcccttcccgtggag
aaaattgaaattgccaagtacttccccgaaaagtttgagtggcttccgatatcgagctgg
aaccagcaacttaccaagaggaaaaagaagaaaaagcaagataatttgcagggggcgcct
tattacttgaaagacggagacacaattggtattaagaatctcctggttgaggatgacgaa
gatttcagtacagtcgcagatgacctgggaaagaaaagccaggaagcccttcgtgtgcag
agcagtgaccttttctccagtgccaagacgcccagccggccccgtgcaccagaagcttct
ctctccatccacgtggggagtttcagatag
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