Zobellella denitrificans: AN401_12795
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Entry
AN401_12795 CDS
T05100
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
zdf
Zobellella denitrificans
Pathway
zdf03030
DNA replication
zdf03430
Mismatch repair
zdf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN401_12795 (dnaE)
03430 Mismatch repair
AN401_12795 (dnaE)
03440 Homologous recombination
AN401_12795 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zdf03032
]
AN401_12795 (dnaE)
03400 DNA repair and recombination proteins [BR:
zdf03400
]
AN401_12795 (dnaE)
Enzymes [BR:
zdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN401_12795 (dnaE)
DNA replication proteins [BR:
zdf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN401_12795 (dnaE)
DNA repair and recombination proteins [BR:
zdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN401_12795 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ATG74624
UniProt:
A0A291HR63
LinkDB
All DBs
Position
complement(2748069..2751542)
Genome browser
AA seq
1157 aa
AA seq
DB search
MPVPFIHLRVHSDFSMVDGLAKIGPINKRVRELGYPALALTDQMNLCGLVRFYGDAHGKG
LKPIVGTDIWVQSEELGEQQFRLTLLAMDNTGYQNITLLISRAYERGHVQHRPVVDKAWL
AEHSEGVIVLSGGRDGDVGIYLLKGNDELAAQCLSFYRQHFPDRYYLELLRTERPDEESY
LHMAVALAGREGLPVVATNEVVFLDKDDFDAHEIRVAIHDGYTLDDKRRPRRYSAEQYLK
SPAEMAELFADIPEALENSVEIAKRCNVTVRLGEYFLPDFPTGDMSIEDYLVKCSQEGLE
ERLEFLFPDPAVRAEKRGEYDERLKIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDHVAEL
YGREAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEVEPKL
PELYDQDEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDEHGRNPVTQF
DKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKDSFKLLK
RHETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREAI
SYPDEQWQHESLQPILEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMA
KQRAGFEAGAVANGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTADMDNTDKVVTLVDECQRMGLSLLPPDVNSGRYRFTVNEDGHIVYGIGAIKGV
GEAPIEAILEAREQGGPFRDLFDFCNRVDLKKLNKRVMEKLILSGAMDRLGPHRASLMAT
LEEAMKAADQHARAEALGQGDMFGVLVEEENIEHAFADVAPWPDQVWLEGERDTLGLYLT
GHPINQYAKELRHYTGGRLNEVQPTGRDRSTTVAGLVIAARVMTTKRGNRMGILTLDDKS
GRLDVTLFSDALDRYESLLEKDKILVISGQVSFDDFSGGLKMSAREVLDINEARERFARG
LQLNIDKSQIDQGFFTQLLDILTPVRAGVCPVRVTYHRPGARAQLQLGTEWRVTPTDQML
EALKQLLGRDKVELIFE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgccggttccctttatccatctgcgcgtccattcggatttttccatggtggacggcctg
gccaagataggccccatcaacaagcgggtgcgggaactgggctatccggccctggccctg
accgaccagatgaacctgtgcggcctggtgcgcttctacggcgacgcccacggcaaagga
ctcaagcccatcgtcggcaccgatatctgggtgcagagcgaggagctgggcgagcagcag
ttccgcctgaccctgctggccatggacaacaccggctaccagaacatcaccctgctgatc
tccagggcctacgagcgcggtcatgtgcagcacaggcccgttgtcgacaaggcctggctg
gccgagcacagcgaaggggtcatagtgctgtccggcgggcgcgacggggacgtcggcatt
tacctgctcaagggcaacgacgagctggcggcccagtgcctgtccttctaccggcagcat
tttcccgatcgctactaccttgagctgctgcgcaccgagcggccggacgaagaaagctac
ctgcacatggcggtggccctggccgggcgggaagggctgccggtggtggccaccaacgag
gtggtgttcctcgacaaggacgacttcgacgcccatgagatccgggtagccatccacgac
ggctacaccctcgacgacaagcgccggccgcgccgctacagcgccgagcagtacctcaaa
agcccggcagagatggccgagctgttcgccgacatccccgaggcgctggaaaacagcgtg
gagatcgccaagcgctgcaacgtgacggtgcgcctgggcgagtatttcctgccggacttt
cccaccggcgacatgagcatcgaggactacctggtcaagtgctcgcaagaaggactggag
gagcggctcgaattcctgttcccggatccggccgtgcgcgccgagaagcgcggcgaatac
gacgagcggctcaagatcgagctggaagtgatcaaccagatgggcttccccggctacttc
ctgatcgtgatggagtttatccagtggtccaaggataacggcattccggtggggccgggg
cggggttcgggggcgggctccctggtggcctatgcgctcaagatcaccgacctggatccg
ctcgagttcgacctgctgttcgaacgcttcctcaacccggagcgggtgtcgatgcccgac
ttcgacatcgacttctgcatggacaggcgcgacgaggtcatcgaccacgtggccgagctg
tacggccgggaggcggtgagccagatcatcaccttcggcaccatggccgccaaggcggtg
gtgcgcgacgtgggccgggtactgggccacccctacggcttcgtcgaccgtatctccaag
ctgatcccgccggatccgggcatgaccctggccaaggcgttcgaggtcgagcccaagctg
cccgaactctacgaccaggacgaagaggtcaaggcgctgatcgacatggcgcgcaagctg
gagggggtgacccgcaacgccggcaagcacgccggcggcgtggtcatcgcgcccaccaaa
atcaccgacttctcgccgctctactgcgacgagcacggccgcaacccggtcacccagttc
gacaagaacgacgtggaatacgccggcctggtgaagttcgacttcctcggcctgcgcacc
ctcaccatcatcgactgggcgctgggcatgatcaaccccaggctggcgaaggaaggcaag
ccgccggtggacatcgccgccatccccatcgacgataaggattcgttcaagctgctcaag
cgccatgagaccacggcggtgttccagcttgaatcccgcggcatgaaggacttgatcaag
cggctgcagccggactgcttcgaggacatgatcgccctggtggccttgttccgaccgggg
ccgctgcagtcgggcatggtggacaacttcatcgaccgcaagcacgggcgggaagccatc
tcctacccggacgagcagtggcagcacgagtcgttgcagcccatcctcgagcccacctac
ggcatcatcctctaccaggagcaggtgatgcagatagcccaggtgctggccggctactcc
ctgggcggcgccgacctgttgcgccgggccatgggcaagaagaagccggaggagatggcc
aagcagcgcgccggcttcgaggccggtgccgtggccaacggcatcgacggcgaactggcg
atgaagatcttcgacctggtggagaagttcgccggctacggcttcaacaagtcgcactcc
gccgcctacgccctggtgtcctaccagaccctgtggctcaagacccactacccggccgag
ttcatggcggcggtgatgaccgccgacatggacaacaccgacaaggtggtgaccctggtg
gacgaatgccagcgcatggggctttccctgttgccgccggacgtcaactccggtcgctac
cgcttcaccgtcaacgaggacggtcatatcgtctacggcatcggtgccatcaagggagtg
ggcgaggcgcccatcgaggccatcctcgaggcgcgggagcagggcgggcccttccgggat
ctgttcgacttctgcaaccgggtcgatctgaagaagctcaacaagcgggtgatggaaaag
ctgatcctctccggcgccatggatcggctgggcccgcaccgggcctcgctgatggcgacc
ctggaagaggcgatgaaggccgccgaccagcacgcccgcgccgaggccctgggccagggc
gacatgttcggggtgctggtggaggaagaaaacatcgagcatgccttcgccgacgtcgcg
ccctggccggaccaggtgtggctggaaggggagcgggacacgctcgggctctacctcacc
ggccatcccatcaaccagtacgccaaagagctgcgccactacaccggcggccggctcaac
gaggtgcagcccaccgggcgggatcgcagcaccaccgtggcggggctggtgatcgccgcc
cgggtgatgaccaccaagcgcggcaaccgcatgggcatcctcaccctggacgacaagtca
ggccggctggacgtgaccctgttttcggatgccctggatcgctatgagtctttgctggaa
aaggataaaatcctggtcatcagcggacaggtcagctttgacgacttctccggcggactt
aaaatgtcggcacgggaagtgctagacattaatgaggcgcgcgagcggtttgcccgcggg
ctacagttgaacatcgacaaaagccagatcgatcagggctttttcacccaattattggac
attctcacgccggtgagggcgggagtctgtcctgttcgagtgacctatcacagaccggga
gcacgggcgcagcttcagcttggaaccgaatggcgggtaacccccaccgatcagatgctg
gaagcgctgaaacagttgctgggtcgggataaggtcgaactgatttttgaatag
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