Zobellia galactanivorans: ZOBELLIA_2338
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Entry
ZOBELLIA_2338 CDS
T01586
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
zga
Zobellia galactanivorans
Pathway
zga02020
Two-component system
zga02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ZOBELLIA_2338 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ZOBELLIA_2338 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zga03021
]
ZOBELLIA_2338 (rpoN)
Transcription machinery [BR:
zga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ZOBELLIA_2338 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Ribosomal_S10
Mor
HTH_12
Motif
Other DBs
NCBI-ProteinID:
CAZ96492
UniProt:
G0LBW6
LinkDB
All DBs
Position
complement(2739474..2740934)
Genome browser
AA seq
486 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALEGGKEESDSIDDEF
ADTYENDETDSEIISTEDINIDDYLSDDEIPDYRTKANNYSADDEEKNVPYAAGTSFNQY
LLSQMNTVYLSDDEWSIAEFLVGSVDESGYIRRPLSDITDDLAFTQNIYTDEETVERVLK
IVQKLDPPGVAARSLEECLIIQLKRKESSPSIELAISILEKSFEQFTKKHYKKLIQKYNI
SEEQLREAISEIEKLNPKPGGSYSGNNRMVEHVVPDFSIRIVDGELELSLNGRNAPELHV
SREYSNMLKGYKDAKKKSKSQKDTVMFIKQKLDAAKWFIDAIRQRQQTLFITMNAIMQYQ
SEYFLTGDERNLRPMILKDIADEIEMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMKND
QGEDVSTKEIKKILETVIGEESKKKPLTDDKLAALLKEKGYPIARRTVAKYREQLDIPVA
RLRKQI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaacacttacaattcaaattatcacaaaagctatctccccagcagatacag
cttatgaagttgattcaattgcccacacaggcctttgagcaacgtcttaaacaagaattg
gaagaaaaccccgcattggaaggaggcaaagaggaatcggactccatagacgacgaattt
gccgacacttacgaaaacgatgagaccgatagtgagatcatatccaccgaagacatcaac
atcgacgattacctaagtgacgacgaaatacccgactacagaacaaaggccaacaattat
agcgccgatgacgaagaaaagaacgttccctacgcggcgggcacttcgttcaaccagtat
ttgttgagccaaatgaacaccgtatatcttagcgatgacgagtggagcattgccgaattt
cttgtcggtagcgtagacgaaagcggctatatcagaagaccgctctcagacataaccgat
gaccttgcgtttacccaaaacatatacaccgacgaagaaacggtagaacgggtattgaaa
atcgttcagaaactcgaccctcccggggttgcggcacgctcattggaggaatgcctaatc
attcaactcaagagaaaagaaagctcgccaagcatagaactagcgattagcattctcgaa
aagtcattcgaacagtttaccaaaaagcactacaaaaagcttattcagaaatataatatt
tcagaagaacagctcagggaagccattagtgaaatcgaaaagctaaacccaaagcccggt
ggctcgtattcaggcaacaaccgcatggtagagcacgttgttcccgatttttccattcgg
atcgtagacggcgaactagagcttagcctaaacggaagaaacgccccggaacttcacgta
tcgagggagtacagcaacatgttaaagggatataaagacgccaagaagaagtcgaaatca
cagaaagacaccgttatgttcatcaagcaaaagctcgatgccgcaaaatggtttatagat
gccattcgacaacgtcaacagaccctattcatcaccatgaacgctataatgcagtaccag
tcggaatactttcttacgggagacgaacgcaacctgagacccatgatcctaaaggacatt
gccgacgaaatagaaatggatgtctctaccgtgtcgcgtgtagccaacagcaagtacgtt
gacaccccttacggcaccaaactcatcaaggaattcttttccgaatcgatgaaaaacgac
caaggggaagatgtatccaccaaggaaataaagaaaatccttgaaacggtcattggggaa
gaatcgaagaaaaagccccttaccgacgataaattggcagcactgcttaaagaaaaaggg
tatccgattgcccgtcgaaccgttgccaagtacagggagcagttagacattccggtagcc
aggctgcgcaaacagatttaa
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integrated database retrieval system
