Ziziphus jujuba (Chinese jujube): 107413437
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Entry
107413437 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107413437
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107413437
Enzymes [BR:
zju01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
107413437
Ribosome biogenesis [BR:
zju03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
107413437
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Radical_SAM_2
Fer4_12
Integrin_b_cyt
Motif
Other DBs
NCBI-GeneID:
107413437
NCBI-ProteinID:
XP_048326166
LinkDB
All DBs
Position
8:complement(join(11792327..11792503,11792615..11792751,11792914..11793053,11793196..11793299,11794081..11794197,11794593..11794679,11794839..11794940,11795521..11795618,11795751..11795826,11795968..11796207))
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AA seq
425 aa
AA seq
DB search
MIAASMAVLQLACPVPLARAVRTRSISVNTVVSAYSPRHSSNLSTLTTPSPSRASHAADS
RVLLGLSEADLQQLALDFGQQKYRGKQLHHLIYQRKVKDIQDFSHLPQAFRNELQNAGWR
VGRSPVYQSVTAADGTVKLLIKLEDNRLIETVGIPVPDDKGSMRLTACVSSQVGCPLRCS
FCATGKGGFSRNLCPHEIVEQVLAIEEVFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNK
DVQIGQRMITISTVGVPNTIKKLATHKLQSTLAVSLHAPNQKLRETIVPSAKSYPLEAIM
KDCRDYFRETSRRVSFEYALLAGVNDAVELAKELAELLHEWGGGYHVNLIPFNPIEGSEY
QRPYKKAVMAFAAALESRKITVSVRQTRGLDANAACGQLRNKFQKSPLLSESENVPSQSD
IAVAC
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgcgtcaatggcggtacttcagctggcatgccccgtaccactcgcacgtgcg
gtgcgtactcgttccatatcagtgaataccgttgtgtcagcttacagtcccaggcacagc
agcaacctctctactcttaccacgccctctccatcacgtgcttctcacgcagccgactct
cgtgtcctcctcggcctgtccgaggctgaccttcaacagctcgccctcgactttggtcag
caaaaatatagagggaagcaattgcatcatcttatttaccaaagaaaggtcaaagatatt
caggattttagtcacttgcctcaggcattcaggaatgagcttcagaatgctggatggagg
gttgggcgatctcctgtttaccagtctgtcactgcagccgatgggactgttaagttactg
ataaagttggaagataacagattgattgagactgttggcataccagttccagatgacaaa
ggttcaatgcgtcttactgcatgtgtctcgtcacaggttggctgtcctttgcgatgctca
ttttgtgcgacagggaaagggggattttcaagaaacctttgcccgcatgaaattgtggaa
caggtcttagcaattgaggaggtcttcaagcatagagtgacaaatgtagtgttcatggga
atgggtgagccaatgttgaacctgaaatcagtactggaagcacatcggtgcctgaataag
gatgtgcaaattgggcaaagaatgataacaatctccactgtgggagttccaaacacaatt
aaaaagctggctactcacaaacttcagtcaacattggctgtaagtctccatgctcctaac
cagaaacttagggaaacaattgtgccaagtgcgaaatcctaccctcttgaagcaattatg
aaggattgcagggattattttcgtgaaaccagtcgacgggtttcctttgagtatgcactt
ttagctggagtcaatgatgccgtagagcttgcaaaagaacttgcagaactactccacgaa
tggggtggtggttatcatgtgaatcttataccttttaatccaatagaaggctctgagtat
cagcgtccatacaagaaagcggtaatggcttttgcagctgctttagagtcccgtaaaata
actgttagtgttcgccaaacaagagggctggatgcaaatgcagcttgtggtcagctgaga
aacaagttccagaagagtcctttgctttctgaatctgaaaatgttccatctcaatcagat
attgcagttgcatgttga
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