| Entry |
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| Name |
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X2
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| KO |
| K14325 | RNA-binding protein with serine-rich domain 1 |
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| Organism |
zju Ziziphus jujuba (Chinese jujube)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:zju00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107417979
03015 mRNA surveillance pathway
107417979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:zju03019]
107417979
Messenger RNA biogenesis [BR:zju03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107417979
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(join(8133412..8133475,8134161..8134192,8134284..8134350,8134527..8134643,8134876..8134941,8135029..8135263,8135360..8135519,8135604..8135684,8135769..8135815,8136021..8136112,8136427..8136495,8137281..8137513))
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| AA seq |
420 aa
MAKPSRGRRSPPSGSNSGSSSRSRSYSGSSSRSTSRSRSYSRSPSVSRSPSRSRSISTSS
SPSRSASSRSRTPPPRKSPVETARRGRSPPPQSKKASPPPRKASPSTHESLVLHIDALTR
NVHEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRSDAEKAQLYMDGAQIDGN
VVRARFTLPQRQKVSPPPKAVAGAPKRDISKSDNVSADKDGPKRPREPSPRRKPPPSPRR
RSPVARRGGSPRRLPDSPPRRRAESPVRRRIESPYRRGDTPPRRRLASPPRGRSPSPPPR
RRSPARASPRRMRGSPIRRRSPLPPRRRSPPRRARSPRRSPISRRRTRSPIRRPARSRTR
SISPPRRGRAPATRRGRSSSYSESPSPRKVTRRVSPSPRRPLRGRSSSNSSSSSSPPRKP |
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| NT seq |
1263 nt +upstreamnt +downstreamnt
atggcgaagccgagcagaggccgtcggtcgcccccatcaggctccaattcaggctcatct
tcacggtcgcgttcatactccggctcgtcgtctcgctccacttctcgctcgcgttcgtat
tctcggtccccttcggtttctcgctccccatctcgttccaggtctatctccaccagttcc
tctccttctcgcagcgctagttctcgcagccgaaccccacctcctaggaaaagtcctgtt
gaaacagctaggcgtggtcgatctccaccaccacaatctaaaaaagcttcaccgcctcca
aggaaagcttctccttctactcatgagtcgcttgttcttcatattgatgcacttaccagg
aatgtgcatgaaggccatctgaaagaaattttcagtaactttggtgaagttgttcatgtt
gagctggcaatggatcgaactgtcaatttgccgaaaggatatggatatgttgagttcaag
acgagatccgatgctgaaaaagcacaattgtacatggatggtgctcaaattgatggtaat
gtagttcgagcaaggttcacattacctcagagacaaaaggtttcacctcctcctaaagct
gttgccggtgctccgaagagagacatttccaaatctgataatgttagtgctgacaaggat
ggacctaagcggccaagagaaccttctccccggcgaaaacctcctccctcaccacgaagg
aggtcacctgtagctcgaagaggtggatcgcctagaagactgccagactctcctccacgt
cgtcgtgctgagtctcctgttcgtcgtagaatagagtctccttatcgtcgtggtgatacg
cctccccgcaggaggcttgcatcgccacctaggggccgttctccatcacctcctccaaga
cggcggtctcctgctagagcctctcctagaaggatgcgtggcagtcctattcgtagacgc
tctccccttcctccaaggcgccgttcacctccaagacgggctcgcagtcctcgaaggtct
ccaattagccgtagacgtactcgttctcctattcgtaggcctgctcgctcacgtacaaga
tcaatatcaccaccgcgaaggggtcgagcaccagcgacaagacgtgggaggtcatcatca
tactctgaatcacctagtccacggaaggtaacgcggcgggtatccccaagtccaagaagg
cctttgagaggacgaagtagtagcaatagcagcagcagcagttcaccacctcggaagccg
tag |
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