Zootermopsis nevadensis (dampwood termite): 110829023
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Entry
110829023 CDS
T05136
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110829023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zne03021
]
110829023
03036 Chromosome and associated proteins [BR:
zne03036
]
110829023
Transcription machinery [BR:
zne03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110829023
Chromosome and associated proteins [BR:
zne03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110829023
PBAF complex
110829023
GBAF(ncBAF) complex
110829023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110829023
NCBI-ProteinID:
XP_021917985
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MVSLAPKKDGGPNTKFFESPETISLFDAIKSWLQKNCRKYVQTDPPTSKGLSSLVIQLIQ
FQEDNLGKNVSKPPLTRLPMRCFLDFKPGGALCHILATVYKFKSDQGWRRFDFQSPSRMD
RNVEMFMNVEKVLIQNKCLTMPVIYVRSEVEKSMQVKIKDIIKRHQGSITDNEEEATHII
YPPCDPLDEEYARPTMKRDRMVLLHWYYFPDSHDTWTNMELPVEPPDSPAPHAGPWRVAA
MWVLDLDQYNEWMTEEDYEVDEGGHKKIHKLRLSVDDLMSQSDPDRNKKKPKRKRSPSPV
PKRDKRKSGRSPAASGSKKHKSEEEADDLTKEMEEPPSEPNIQEVTVPKPGSSSKKDNDL
QPIKGGTMTELEEEAEKGEDSQTGKASDTNTQEFSTKDDGQEDNVTEQTHHIIIPSYSAW
FDYNSIHTVEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAG
DVCAIMRVHAFLEQWGLINYQVDSDSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTPQP
SAAKTLLDLDKKDPSKKTDSDPGSNFGLKLDQYARKPAALRNKTAASMTREWTEQETLLL
LEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPF
SKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFASIKDEVPAALMDAHFKNVEASSTDG
KFDPSAGLAQSGIAGTVPEKEEESMDKEKKEGEKESEEKATGSDGEKKEGDKVEPMEVDK
KPEEKESPKELSAEEKVAGTEENLTVKEEKSEEAVVSSAESTGETEQERMVKDAQLQAAA
AAALAXXXXXXXXXXXXKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQ
QLITERQQFHLEQLKAAEFRARQQAHQRLAAEQGSWQSASSQQVGSVVTSGSAVAGSAVS
SGSEQQSGGPATPSTTPTPPSPQAVPGSGPPHSGATAVPPLHPSAAGSPSPGPPMGTQPS
PQQPT
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctcttgcaccgaaaaaggatggagggcctaacacaaagttttttgaatctcca
gaaaccatatctttattcgatgctataaaatcgtggttgcagaaaaactgtagaaagtat
gttcaaacagatccacctacgagcaaaggtttgtcttcgttggtcattcagcttatacaa
ttccaagaggacaatcttggaaagaatgtcagcaaacccccacttaccagactgcctatg
agatgttttctagatttcaaacctggcggtgccttgtgccacattctagctacagtctac
aaatttaagagtgatcagggatggaggagatttgattttcagtcaccttctcgaatggac
cgcaatgtggaaatgtttatgaatgtggaaaaggtcctcatccaaaacaaatgccttaca
atgccagtaatatatgtacgatcagaggtggagaaaagcatgcaggtgaaaataaaagac
ataatcaagagacaccaaggatccatcacagataacgaagaggaagcaacacacataatt
tacccaccttgtgatccattggacgaggaatatgcccgtcctaccatgaagcgagatcgg
atggttctgctgcattggtactacttcccagacagccatgatacttggaccaatatggag
ttgcctgttgaaccacctgactctcctgcgccacatgctgggccttggcgggtagcagca
atgtgggtgctagatcttgatcagtataatgagtggatgactgaggaggattatgaagtt
gatgaaggaggacacaagaagatacacaagcttcgtctgtcagtcgatgatctgatgagt
cagtctgatccagaccgcaacaagaagaaaccaaaacgcaagagatcaccttcgcctgtt
ccaaaacgtgataagaggaagagtggtcgcagccctgcagcaagtggaagcaagaagcac
aagagtgaggaagaagctgatgatcttaccaaggaaatggaagaacctccttcagaaccg
aacattcaggaggttactgtccccaagccaggttcatcctctaagaaggacaatgacctt
cagcccatcaagggtgggactatgacagagctggaggaggaggcagagaagggtgaagac
agtcagactggcaaggcgtcagacaccaacacacaggaattcagtacaaaggacgatggg
caggaggacaatgtgacggagcagacccatcacatcatcattccaagctactcagcatgg
tttgactacaattccatccacaccgtggagaaacgtgccctacccgagttctttaatggc
aagaacaaatcaaagacaccggagatctacttggcataccgcaacttcatgatcgataca
taccgcctcaatcctacagagtacatcactagtaccgcctgcaggcgcaacttggcgggg
gatgtttgtgccatcatgagagtgcatgctttcttggagcagtggggtctcattaattat
caggttgactctgacagccggccaactcctatgggccctccaccaacttcacatttccat
gttctgtcagatactccatctggattgcaacctataaacccgcccaagacacctcagcca
tcagctgccaaaacactcctggatctggacaagaaggacccttccaagaaaactgactcg
gatcccggaagtaactttggccttaagcttgatcagtatgcacggaaacctgcggcattg
cgtaacaagacagcggccagcatgacccgcgagtggacagaacaagagacgctgctgctc
ctggaaggtctggagctgtacaaggatgactggaataaagtttgtgagcatgtcggtagc
aggacacaggatgagtgcattctgcacttcttgaggctgcctattgaagatccatacctt
gaggatcatgaagcagggggaggagcacttggacctctagcataccagcccatccctttc
agcaaggcaggcaaccccatcatgtccactgtcgcattccttgcgtcagtggtggaccca
agggtggctgcatcagcagcaaaggcagcgatggaggagtttgctagtatcaaggatgaa
gtaccagcagctctgatggacgcacattttaagaatgtcgaggcatcatccactgatggg
aagtttgatccatcagctggtctggcacaaagtggaattgctggtacagttcctgagaag
gaagaagaatccatggacaaggagaagaaagagggagagaaagaaagtgaagaaaaggca
acagggtcagatggagagaagaaagaaggagacaaggtggagccaatggaagtagataaa
aagcctgaggagaaggagagtcccaaggagctgagtgctgaagagaaggtagctggcact
gaggagaatctgactgtgaaggaagagaagtcagaggaggcagtagtcagctcagcagag
agtacaggtgagacagaacaggaacgaatggtgaaggacgcacagctccaggctgctgcc
gctgctgctctagctnngnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatcaag
tccttggtcgctcttctggtggagacacagatgaagaaacttgaaatcaagcttcgtcac
tttgaggagctggaaacgacgatggaacgagagcgagaaggattggaatatcagcgacag
cagctaatcaccgagcgccagcagtttcacttggagcagttgaaggccgccgagttccgg
gcgcgccagcaggctcaccagaggcttgctgcagagcagggatcatggcagtctgcatcc
tcccagcaggttggcagtgtagtaacctcaggttctgcagtggctggcagtgcagtgtcc
tcaggcagtgaacagcagtctggtggccctgccacaccaagcaccacacccactccacca
tccccacaagctgtgcctggatcagggccgcctcattcgggcgccaccgccgttccccct
cttcatccctcggcagccggctctccctctcccggaccgccgatggggacgcagccgtct
cctcagcagcctacatag
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