Zymoseptoria tritici: MYCGRDRAFT_63781
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Entry
MYCGRDRAFT_63781 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_63781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_63781
Enzymes [BR:
ztr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
MYCGRDRAFT_63781
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCGRDRAFT_63781
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MYCGRDRAFT_63781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
13396496
NCBI-ProteinID:
XP_003848405
JGI:
Mycgr3_63781
UniProt:
F9XNA8
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All DBs
Position
11:1101417..1103791
Genome browser
AA seq
692 aa
AA seq
DB search
MYNNHNHRQNHSLLNGGAHQNFQPQMSLGKAFQSQSHGHQAHHLNNHNQDHGLGHSNNFG
NHHHTISASTLSNTTPNFTPAHLQNGTPESSSTLSKPPNAHWAEQLREYERLKMADHKTH
FYARTTPSVSRYPGASPSTNNARTDGEEHGERRRVLEGSEDMGSWNAMDLCGQGLKGMAP
ALFKHYPKLSKVYLNWNKLREIPPQIGQMRFLTVLDLSMNDLHYLPPEIGMLTNLKKLAL
YDNHLDDLPYELGSLYQLEMLGIEGNPMRPDYKERLVEHGTQELVRYLRENAPQPEPPLD
RAWIPLIEDASETDNFTIFSWNILCDRAATAAMYGYTPSEALSWQRRRDLILDEMQGRDA
DIMCLQEMDIENYNEFFRPNLASMDYKGVFWPKSRAQTMAEKEAKVVDGCAIFYKNTKYI
MLDKQVIIFSREAISRPDMKGEHDVYNRVMPRDHVAVVLFLENRQTGSRLIVVNTHLTWE
PWYSDIKIVQVAILMESLTKLSETYAKWPACKDKDLFKFANEDSADGAEPVKMEPGPSMK
YDEPTQIPLVVCGDYNSTHDSGVYELITQGSLSNSHSELGNNNYGDFTRHGMSHPFSLKS
AYSGIGELPFTNWTPDFRKVIDWVFYATNTMQVTGVLGEVDPDYMRRVPGWPNHYFPSDH
LPLMMQFGIKERKERKAAVETDFGPARRESRN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaatcataatcaccgccaaaaccatagcctgctcaatggcggtgcgcaccag
aacttccagcctcagatgagcttgggcaaggcattccagagccagtcacacggccatcaa
gcgcaccatctgaacaatcacaatcaggaccacggtttagggcatagcaacaactttgga
aatcaccaccataccatctccgcgagcaccttgtcgaacaccaccccgaacttcactccc
gcacatctccagaatggcacacccgagagctccagcacgctgagcaagccaccgaatgca
cattgggcagagcaattgagggaatacgaacgactcaagatggcggatcacaagactcac
ttttacgcgcggacaacaccatcagtgagtaggtatcctggagcttcaccttcgacgaac
aatgcgcgaacggatggagaagagcatggtgagaggagacgcgtgctcgaaggttcagaa
gatatgggatcatggaatgcaatggatctctgcggacaaggactgaaaggcatggcacct
gcattgttcaagcactacccgaaattgagcaaggtctacctaaactggaacaagttgaga
gagatccctccacagattggacagatgcgcttcctgaccgttctggacctctccatgaac
gatctgcattacctgcctccggagattggtatgttgacgaatttgaagaagcttgctcta
tacgacaaccaccttgatgatctcccgtacgaactcgggtcgctttaccaactcgaaatg
ctcggcattgagggcaatcctatgaggcccgactacaaggagcgattggttgagcacgga
acgcaggagctggtcagatatcttcgtgaaaacgcgccacaacccgaaccaccccttgac
cgagcatggatacctctaatcgaagacgcttccgaaactgacaacttcacgatcttcagc
tggaacattctctgcgaccgggctgcaaccgccgctatgtacggctacacaccctcggaa
gcgctctcctggcaacgaaggagagatttgattctcgatgaaatgcaaggtcgcgatgcg
gacattatgtgtcttcaggaaatggatatcgagaactacaacgaattcttccgaccgaat
ctggcatcaatggactacaagggtgttttctggccgaagtcgcgagcgcagacaatggcc
gagaaggaagccaaggttgtcgacggatgtgccatcttctacaagaacacaaagtatatc
atgctcgacaagcaggtcatcatctttagtcgagaggccatttcacgaccggatatgaag
ggcgagcacgacgtttacaaccgagtgatgccccgagatcacgttgccgtggtcttgttc
ctggagaaccgacaaaccggatcaagactgatcgttgtgaacacgcatttgacctgggag
ccctggtacagcgacatcaagatcgtgcaggtggctattctgatggaatctctcacgaaa
ctctccgaaacctacgccaagtggccagcgtgcaaagacaaagacctcttcaaattcgcc
aatgaagacagcgccgacggagccgagcccgtgaagatggaacctggtccctcgatgaag
tacgacgaacccacgcaaatccccctcgtcgtctgcggcgactacaactccacccacgac
tctggcgtttacgagctcatcacgcagggctcgctctccaactcccactcggaactcggc
aacaacaattacggcgacttcacccgccacggcatgagccaccccttcagtctgaagtct
gcttacagcggcatcggcgagctgccgttcaccaattggaccccggacttccgtaaagtg
attgattgggtgttctacgctacaaacacgatgcaggtcaccggcgtgctcggcgaggtc
gacccagactatatgcgacgtgtacctggatggccaaaccactatttcccgagtgatcac
ttgccgttgatgatgcaatttggaatcaaggagcggaaagagcggaaagcggcggtggag
acggactttggtcccgcaaggagggaaagcaggaattga
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