Zootoca vivipara (common lizard): 118082138
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Entry
118082138 CDS
T07275
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
zvi
Zootoca vivipara (common lizard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
118082138
NCBI-ProteinID:
XP_034965010
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Position
LG3:complement(65490883..65500771)
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AA seq
675 aa
AA seq
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MPSGFRNMKLQISFLLLLFSVNIVYSTVGYYPERFKVQSSESIKGPAFLPFGVKSQVVQA
RGDQGPSGPAGPPGPRGLPGPAGAPGKPGYGSQGPQGPPGPPGPPGLSTVGKPGLPGLQG
RPGERGLTGEKGDMGPAGLPGPRGPPGAPGIPGPAGISVAGKQGVPGPQGLRGAPGEKGE
PGIPGINGQKGESGYGAPGRPGERGLPGPRGPSGPPGPAGVGRPGERGFPGEPGIKGERG
FPGTSGPIGTPGPQGSRGEPGEPGVGKPGPSGPPGIPGVPGAKGLPGPSGLPGPSGLPGF
GKPGLPGMKGQRGPEGLPGAPGAKGEQGPAGAPGEPGPLGPPGNVGPQGLRGAAGENGLP
GLKGERGPTGPAGSPGLKGERGLPGLQGKSGYPGEPGLTGPKGQPGLPGPKGDAGHAGQP
GLPGPMGSPGPKGVAGVNGEQGPRGPPGIPGTKGPIGPPGIPGFPGSKGETGAPGLPGPA
GIAAKGLDGPMGPPGPPGPKGHNGEPGLPGPPGPPGPPGVIPGGQALAGMPVMKAGEVQG
LTGFPVSAFTATLSKAYPASAAPIRFDKILYNRQQHYDPRSGIFTCRIPGLYYFAYHVHV
KGSHVWVGLYKNGSPIMYTFDEYQKGYLDQASGSAVIELMENDQVWLQLPNNESNGLFSS
EYVHSSFSGFLFAQI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcggatttaggaatatgaagttacaaatatcttttctgctgctgctgttttcc
gtgaacattgtctacagcactgttggctattatcctgaacgctttaaggtgcagtctagt
gaatcaataaaagggcctgctttcctccctttcggtgtgaaaagccaagttgtccaggca
aggggcgatcaaggcccttctggtccagcaggccctcctggtccaagaggactcccaggc
cctgcaggggctccaggaaaaccaggatatggaagccaaggacctcaagggccaccggga
cccccaggacccccaggactttcaaccgttggaaagccaggcctgccaggtttgcaagga
aggccaggggaaagaggactaactggtgaaaaaggagatatgggccccgccggtctccca
gggccaagaggtcccccaggggcccctggaattcctggtccagctgggatatctgttgct
ggaaaacaaggggtgccagggccacaagggctaagaggtgccccaggagaaaaaggtgag
ccaggcattcctggtatcaatggacagaagggcgagagcggatatggggctccaggtcgc
ccaggagaaagaggtctgccggggccacggggaccttcaggccctccaggaccagcaggg
gtaggaaggcctggggaaaggggatttccaggtgagccaggtattaaaggggagcggggt
tttccaggcacctcaggcccaattggtaccccaggtccacaaggctctcgtggggaacct
ggagaaccaggagtaggaaaacctggaccaagtggaccaccaggaataccaggggtccct
ggagcaaaaggacttccaggtccctctggccttcctgggccttctggtctcccaggattt
gggaaaccagggttgccagggatgaagggacagagaggacctgaaggtctccctggtgcc
ccaggagcaaagggagaacaaggaccagctggtgctccaggtgaaccagggccactcgga
ccacctgggaatgtaggccctcaagggctcagaggtgcagcaggtgaaaatggcctccct
ggactcaagggtgagagaggccctacaggtccagcaggatccccagggcttaaaggggag
aggggtctaccaggactgcaggggaaatcaggatacccaggggagccaggacttactggc
ccaaaaggacaaccaggtttgccaggtccaaaaggggatgcagggcatgctgggcaacct
ggcctacctggcccaatgggatcaccaggacctaagggagtggcaggagtcaatggtgaa
caaggccctagaggaccgccaggaatacctggtacaaaaggaccaattggtcctccaggt
attccaggattccctggcagtaaaggggaaacgggtgcaccaggattaccaggcccagct
ggtattgctgcaaagggtttagatgggcctatgggacctccaggaccaccaggccccaaa
ggccacaatggagagcctggtttgccaggtcctccaggtcctcctggacctcctggagta
atcccaggaggccaggccctggccggaatgcctgttatgaaagctggtgaagtgcaaggt
ctaactggctttccggtgtcagctttcactgccactctttccaaagcttaccctgcatca
gctgcccctatcagatttgataagatcctgtacaacagacaacagcactacgaccccagg
tcagggatcttcacttgcaggataccaggactttactactttgcttaccacgtgcatgtg
aaagggtcacatgtttgggtaggcctgtacaaaaatggctcgcccatcatgtacaccttt
gatgagtaccagaaaggctacctcgatcaggcttctggcagtgctgttattgagctcatg
gaaaatgaccaagtctggttgcagctgcccaacaatgaatcgaacggcctgttctcttca
gagtacgttcactcctccttctcaggtttcttatttgcacaaatataa
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