Entry
Name
N,N-dimethylglycine/sarcosine dehydrogenase (ferredoxin);
ddhC (gene name);
dgcA (gene name)
Class
Oxidoreductases;
Acting on the CH-NH group of donors;
With an iron-sulfur protein as acceptor
BRITE hierarchy
Sysname
N,N-dimethylglycine/sarcosine:ferredoxin oxidoreductase (demethylating)
Reaction(IUBMB)
(1) N,N-dimethylglycine + 2 oxidized ferredoxin + H2O = sarcosine + formaldehyde + 2 reduced ferredoxin + 2 H+ [RN:
R13028 ];
(2) sarcosine + 2 oxidized ferredoxin + H2O = glycine + formaldehyde + 2 reduced ferredoxin + 2 H+ [RN:
R13029 ]
Reaction(KEGG)
Substrate
Product
Comment
This bacterial enzyme is involved in degradation of glycine betaine. The enzyme contains non-covalently bound FAD and NAD(P) cofactors, and catalyses the demethylation of both N,N-dimethylglycine and sarcosine, releasing formaldehyde and forming glycine as the final product. The enzyme can utilize both NAD+ and NADP+, but the catalytic efficiency with NAD+ is ~5-fold higher. The native electron acceptor of the enzyme is a membrane-bound clostridial-type ferredoxin, which transfers the electrons to an electron-transfer flavoprotein (ETF).
History
EC 1.5.7.3 created 2022
Pathway
ec00260 Glycine, serine and threonine metabolism
Orthology
K21833 N,N-dimethylglycine/sarcosine dehydrogenase
Genes
VIB : VspSTUT11_45590(dgcA)
PCQ : PcP3B5_61330(stcD_2)
PPRC : PFLCHA0_c56930(stcD2)
PTRT : HU722_0027315(dgcA)
PTW : TUM18999_06200(dgcA)
HAAH : HALA3H3_470050(stcD)
HAAZ : HaloA020_23290(dgcA)
BPM : BURPS1710b_A2110(stcD)
PDIO : PDMSB3_1498.1(stcD)
TVL : FAZ95_23260 FAZ95_30360
MAQU : Maq22A_c26620(nemA)
PHOS : ABFY19_01955 ABFY19_02010 ABFY19_04150
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Taxonomy
Reference
Authors
Wargo MJ, Szwergold BS, Hogan DA
Title
Identification of two gene clusters and a transcriptional regulator required for Pseudomonas aeruginosa glycine betaine catabolism.
Journal
Sequence
Reference
Authors
Yang T, Shao YH, Guo LZ, Meng XL, Yu H, Lu WD.
Title
Role of N,N-Dimethylglycine and Its Catabolism to Sarcosine in Chromohalobacter salexigens DSM 3043.
Journal
Sequence
Other DBs
ExplorEnz - The Enzyme Database: 1.5.7.3
ExPASy - ENZYME nomenclature database: 1.5.7.3
BRENDA, the Enzyme Database: 1.5.7.3
LinkDB
All DBs