KEGG   DISEASE: Seckel syndrome
Entry
H00992                      Disease                                
Name
Seckel syndrome
Description
Seckel syndrome is a recessively inherited dwarfism characterized by intrauterine growth retardation, proportionate postnatal dwarfism, severe microcephaly, micrognathia, and 'bird-headed' profile. Mental retardation also occurs. Genes that control cellular responses to DNA damage are linked to the syndrome.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD24  Syndromes with skeletal anomalies as a major feature
    H00992  Seckel syndrome
Pathway-based classification of diseases [BR:br08402]
 Replication and repair
  nt06509  DNA replication
   H00992  Seckel syndrome
  nt06506  Double-strand break repair
   H00992  Seckel syndrome
  nt06508  Interstrand crosslink repair
   H00992  Seckel syndrome
Pathway
hsa03030  DNA replication
hsa03440  Homologous recombination
Network
nt06506 Double-strand break repair
nt06508 Interstrand crosslink repair
nt06509 DNA replication
Gene
(SCKL1) ATR [HSA:545] [KO:K06640]
(SCKL2) RBBP8 [HSA:5932] [KO:K20773]
(SCKL4) CENPJ [HSA:55835] [KO:K11502]
(SCKL5) CEP152 [HSA:22995] [KO:K16728]
(SCKL6) CEP63 [HSA:80254] [KO:K16763]
(SCKL7) NIN [HSA:51199] [KO:K16476]
(SCKL8) DNA2 [HSA:1763] [KO:K10742]
(SCKL9) TRAIP [HSA:10293] [KO:K11985]
(SCKL10) NSMCE2 [HSA:286053] [KO:K22756]
(SCKL11) CEP295 [HSA:85459] [KO:K26251]
Other DBs
ICD-11: LD24.D
MeSH: C537533 C537534
OMIM: 210600 606744 613676 613823 614728 614851 615807 616777 617253 620767
Reference
  Authors
Harsha Vardhan BG, Muthu MS, Saraswathi K, Koteeswaran D
  Title
Bird-headed dwarf of Seckel.
  Journal
J Indian Soc Pedod Prev Dent 25 Suppl:S8-9 (2007)
Reference
PMID:3300331
  Authors
Majoor-Krakauer DF, Wladimiroff JW, Stewart PA, van de Harten JJ, Niermeijer MF
  Title
Microcephaly, micrognathia, and bird-headed dwarfism: prenatal diagnosis of a Seckel-like syndrome.
  Journal
Am J Med Genet 27:183-8 (1987)
DOI:10.1002/ajmg.1320270119
Reference
PMID:12640452 (SCKL1)
  Authors
O'Driscoll M, Ruiz-Perez VL, Woods CG, Jeggo PA, Goodship JA
  Title
A splicing mutation affecting expression of ataxia-telangiectasia and Rad3-related protein (ATR) results in Seckel syndrome.
  Journal
Nat Genet 33:497-501 (2003)
DOI:10.1038/ng1129
Reference
PMID:21998596 (SCKL2)
  Authors
Qvist P, Huertas P, Jimeno S, Nyegaard M, Hassan MJ, Jackson SP, Borglum AD
  Title
CtIP Mutations Cause Seckel and Jawad Syndromes.
  Journal
PLoS Genet 7:e1002310 (2011)
DOI:10.1371/journal.pgen.1002310
Reference
PMID:20522431 (SCKL4)
  Authors
Al-Dosari MS, Shaheen R, Colak D, Alkuraya FS
  Title
Novel CENPJ mutation causes Seckel syndrome.
  Journal
J Med Genet 47:411-4 (2010)
DOI:10.1136/jmg.2009.076646
Reference
PMID:21131973 (SCKL5)
  Authors
Kalay E, Yigit G, Aslan Y, Brown KE, Pohl E, Bicknell LS, Kayserili H, Li Y, Tuysuz B, Nurnberg G, Kiess W, Koegl M, Baessmann I, Buruk K, Toraman B, Kayipmaz S, Kul S, Ikbal M, Turner DJ, Taylor MS, Aerts J, Scott C, Milstein K, Dollfus H, Wieczorek D, Brunner HG, Hurles M, Jackson AP, Rauch A, Nurnberg P, Karaguzel A, Wollnik B
  Title
CEP152 is a genome maintenance protein disrupted in Seckel syndrome.
  Journal
Nat Genet 43:23-6 (2011)
DOI:10.1038/ng.725
Reference
PMID:21983783 (SCKL5 SCKL6)
  Authors
Sir JH, Barr AR, Nicholas AK, Carvalho OP, Khurshid M, Sossick A, Reichelt S, D'Santos C, Woods CG, Gergely F
  Title
A primary microcephaly protein complex forms a ring around parental centrioles.
  Journal
Nat Genet 43:1147-53 (2011)
DOI:10.1038/ng.971
Reference
PMID:22933543 (SCKL7)
  Authors
Dauber A, Lafranchi SH, Maliga Z, Lui JC, Moon JE, McDeed C, Henke K, Zonana J, Kingman GA, Pers TH, Baron J, Rosenfeld RG, Hirschhorn JN, Harris MP, Hwa V
  Title
Novel microcephalic primordial dwarfism disorder associated with variants in the centrosomal protein ninein.
  Journal
J Clin Endocrinol Metab 97:E2140-51 (2012)
DOI:10.1210/jc.2012-2150
Reference
PMID:24389050 (SCKL8)
  Authors
Shaheen R, Faqeih E, Ansari S, Abdel-Salam G, Al-Hassnan ZN, Al-Shidi T, Alomar R, Sogaty S, Alkuraya FS
  Title
Genomic analysis of primordial dwarfism reveals novel disease genes.
  Journal
Genome Res 24:291-9 (2014)
DOI:10.1101/gr.160572.113
Reference
PMID:26595769 (SCKL9)
  Authors
Harley ME, Murina O, Leitch A, Higgs MR, Bicknell LS, Yigit G, Blackford AN, Zlatanou A, Mackenzie KJ, Reddy K, Halachev M, McGlasson S, Reijns MA, Fluteau A, Martin CA, Sabbioneda S, Elcioglu NH, Altmuller J, Thiele H, Greenhalgh L, Chessa L, Maghnie M, Salim M, Bober MB, Nurnberg P, Jackson SP, Hurles ME, Wollnik B, Stewart GS, Jackson AP
  Title
TRAIP promotes DNA damage response during genome replication and is mutated in primordial dwarfism.
  Journal
Nat Genet 48:36-43 (2016)
DOI:10.1038/ng.3451
Reference
PMID:25105364 (SCKL10)
  Authors
Payne F, Colnaghi R, Rocha N, Seth A, Harris J, Carpenter G, Bottomley WE, Wheeler E, Wong S, Saudek V, Savage D, O'Rahilly S, Carel JC, Barroso I, O'Driscoll M, Semple R
  Title
Hypomorphism in human NSMCE2 linked to primordial dwarfism and insulin resistance.
  Journal
J Clin Invest 124:4028-38 (2014)
DOI:10.1172/JCI73264
Reference
PMID:38154379 (SCKL11)
  Authors
Li N, Xu Y, Chen H, Lin J, AlAbdi L, Bekheirnia MR, Li G, Gofin Y, Bekheirnia N, Faqeih E, Chen L, Chang G, Tang J, Yao R, Yu T, Wang X, Fu W, Fu Q, Shen Y, Alkuraya FS, Machol K, Wang J
  Title
Bi-allelic variants in CEP295 cause Seckel-like syndrome presenting with primary microcephaly, developmental delay, intellectual disability, short stature,  craniofacial and digital abnormalities.
  Journal
EBioMedicine 99:104940 (2024)
DOI:10.1016/j.ebiom.2023.104940
LinkDB

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KEGG   DISEASE: Progressive external ophthalmoplegia
Entry
H01118                      Disease                                
Name
Progressive external ophthalmoplegia;
Autosomal dominant progressive external ophthalmoplegia
  Subgroup
Autosomal recessive progressive external ophthalmoplegia [DS:H01395]
  Supergrp
Mitochondrial disease [DS:H01427]
Description
Progressive external ophthalmoplegia (PEO) is a progressive weakness of the external muscles of the eye resulting in blepharoptosis and ophthalmoparesis. Often other muscles are involved resulting in dysphagia and a variable neck and limb muscle weakness. Most sporadic PEO cases have an acquired genetic disease with a heteroplasmic large deletion of mitochondrial DNA (mtDNA) in muscle. In familial PEO, several modes of inheritance occur. Patients may have a nuclear gene defect that predisposes to the accumulation of mtDNA deletions. Recently, mutations in such nuclear genes have been discovered. Some mutations are dominant (PEOA) and others recessive.
Category
Nervous system disease
Brite
Human diseases in ICD-11 classification [BR:br08403]
 09 Diseases of the visual system
  Strabismus or ocular motility disorders
   9C82  Disorders of extraocular muscles
    H01118  Progressive external ophthalmoplegia
Pathway-based classification of diseases [BR:br08402]
 Replication and repair
  nt06509  DNA replication
   H01118  Progressive external ophthalmoplegia
  nt06504  Base excision repair
   H01118  Progressive external ophthalmoplegia
Pathway
hsa03410 Base excision repair   
Network
nt06504 Base excision repair
nt06509 DNA replication
Gene
(PEOA1) POLG [HSA:5428] [KO:K02332]
(PEOA2) SLC25A4 [HSA:291] [KO:K05863]
(PEOA3) TWNK [HSA:56652] [KO:K17680]
(PEOA4) POLG2 [HSA:11232] [KO:K02333]
(PEOA5) RRM2B [HSA:50484] [KO:K10808]
(PEOA6) DNA2 [HSA:1763] [KO:K10742]
Other DBs
ICD-11: 9C82.0
MeSH: D017246
OMIM: 157640 609283 609286 610131 613077 615156
Reference
  Authors
Van Goethem G, Martin JJ, Van Broeckhoven C
  Title
Progressive external ophthalmoplegia characterized by multiple deletions of mitochondrial DNA: unraveling the pathogenesis of human mitochondrial DNA instability and the initiation of a genetic classification.
  Journal
Neuromolecular Med 3:129-46 (2003)
DOI:10.1385/NMM:3:3:129
Reference
  Authors
Copeland WC
  Title
Defects in mitochondrial DNA replication and human disease.
  Journal
Crit Rev Biochem Mol Biol 47:64-74 (2012)
DOI:10.3109/10409238.2011.632763
Reference
PMID:12975295 (PEOA1)
  Authors
Filosto M, Mancuso M, Nishigaki Y, Pancrudo J, Harati Y, Gooch C, Mankodi A, Bayne L, Bonilla E, Shanske S, Hirano M, DiMauro S
  Title
Clinical and genetic heterogeneity in progressive external ophthalmoplegia due to mutations in polymerase gamma.
  Journal
Arch Neurol 60:1279-84 (2003)
DOI:10.1001/archneur.60.9.1279
Reference
PMID:10926541 (PEOA2)
  Authors
Kaukonen J, Juselius JK, Tiranti V, Kyttala A, Zeviani M, Comi GP, Keranen S, Peltonen L, Suomalainen A
  Title
Role of adenine nucleotide translocator 1 in mtDNA maintenance.
  Journal
Science 289:782-5 (2000)
DOI:10.1126/science.289.5480.782
Reference
PMID:11431692 (PEOA3)
  Authors
Spelbrink JN, Li FY, Tiranti V, Nikali K, Yuan QP, Tariq M, Wanrooij S, Garrido N, Comi G, Morandi L, Santoro L, Toscano A, Fabrizi GM, Somer H, Croxen R, Beeson D, Poulton J, Suomalainen A, Jacobs HT, Zeviani M, Larsson C
  Title
Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria.
  Journal
Nat Genet 28:223-31 (2001)
DOI:10.1038/90058
Reference
PMID:16685652 (PEOA4)
  Authors
Longley MJ, Clark S, Yu Wai Man C, Hudson G, Durham SE, Taylor RW, Nightingale S, Turnbull DM, Copeland WC, Chinnery PF
  Title
Mutant POLG2 disrupts DNA polymerase gamma subunits and causes progressive external ophthalmoplegia.
  Journal
Am J Hum Genet 78:1026-34 (2006)
DOI:10.1086/504303
Reference
PMID:19664747 (PEOA5)
  Authors
Tyynismaa H, Ylikallio E, Patel M, Molnar MJ, Haller RG, Suomalainen A
  Title
A heterozygous truncating mutation in RRM2B causes autosomal-dominant progressive external ophthalmoplegia with multiple mtDNA deletions.
  Journal
Am J Hum Genet 85:290-5 (2009)
DOI:10.1016/j.ajhg.2009.07.009
Reference
PMID:23352259 (PEOA6)
  Authors
Ronchi D, Di Fonzo A, Lin W, Bordoni A, Liu C, Fassone E, Pagliarani S, Rizzuti M, Zheng L, Filosto M, Ferro MT, Ranieri M, Magri F, Peverelli L, Li H, Yuan YC, Corti S, Sciacco M, Moggio M, Bresolin N, Shen B, Comi GP
  Title
Mutations in DNA2 link progressive myopathy to mitochondrial DNA instability.
  Journal
Am J Hum Genet 92:293-300 (2013)
DOI:10.1016/j.ajhg.2012.12.014
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