KEGG ORTHOLOGY: K01986

ORTHOLOGY: K01986

Entry

K01986            RNA       KO

Symbol

LSU5.8S

Name

large subunit 5.8S ribosomal RNA

Pathway

map03008

Ribosome biogenesis in eukaryotes

map03010

Ribosome

Brite

KEGG Orthology (KO) [BR:ko00001]
09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    K01986  LSU5.8S; large subunit 5.8S ribosomal RNA
   03008 Ribosome biogenesis in eukaryotes
    K01986  LSU5.8S; large subunit 5.8S ribosomal RNA
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome
    K01986  LSU5.8S; large subunit 5.8S ribosomal RNA
  09184 RNA family
   03100 Non-coding RNAs
    K01986  LSU5.8S; large subunit 5.8S ribosomal RNA
Ribosome [BR:ko03011]
Ribosomal RNAs
  Eukaryotes
   K01986  LSU5.8S; large subunit 5.8S ribosomal RNA
Non-coding RNAs [BR:ko03100]
Ribosomal RNA
  Eukaryotic rRNA
   K01986  LSU5.8S; large subunit 5.8S ribosomal RNA

Genes

HSA:	100008587(RNA5-8SN5) 106632260(RNA5-8SN1) 109864274(RNA5-8SN4) 109864281(RNA5-8SN2) 109910381(RNA5-8SN3)

NLE:	115830582 115834135 115835630

HMH:

116477596

MCC:	109910386 114673268

MTHB:

PANU:

TGE:

RRO:

PTEH:

CJC:

LCAT:

MMU:	790956(Rs5-8s1)

RNO:	100861534(Rn5-8s)

ANU:

117699587

MUN:

132647340

CGE:	100689261(Rn5-8s) 113838060 113838088 113839000

PLEU:

MORG:

AAMP:

CPOC:

DSP:

PLOP:

NCAR:

CFA:

CLUD:

VVP:

VLG:	121483817 121483855

NPO:

UMR:

UAH:

UAR:

LLV:

NVS:

EJU:

NSU:

FCA:

PBG:

LRUF:

AJU:

PUC:

BTA:

BBUB:

OAS:	114112488 114112701

BTAX:

ODA:

CCAD:

MBEZ:

SSC:	100861536(RN5-8S)

CDK:

VPC:

OOR:

PSIU:

ECB:

EAI:

PKL:

EFUS:

DRO:

PHAS:

MMF:

PALE:

PGIG:

PVP:

TOD:

DNM:

GAS:

AFZ:

OAA:

GGA:	112533598 112533600

MGP:	116217666 116217716

CJO:

TPAI:

LMUT:

APLA:

CATA:

AFUL:

TGU:

SCAN:

115484762 115485050 115485178 115485182 115485190

OTC:

PRUF:

OMA:

CCAE:

ETL:

FCH:

SHAB:

ACUN:

TALA:

AGEN:

GCL:

ACAR:

RTD:

AROW:

ASN:	112551051 112551783 112552106

PSS:

CMY:

CCAY:

CPIC:

TST:

CABI:

MRV:

PMUR:

CTIG:

PGUT:

PTEX:

NSS:

PRAF:

ZVI:

HCG:

STOW:

EMC:

XLA:

XTR:	116412538 116412545 116412548 116412560 116412563 116412565 116412566 116412567 116412568 116412569 116412570 116412571 116412572 116412573

BBUF:

BGAR:

CAUA:

PHYP:

EEE:

TRU:	115248389 115248400 115248407 115248583

CGOB:

ELY:

EFO:

SLUC:

ESP:

GAT:

MSAM:

ONL:

OAU:

OML:

XMA:	111606800 111607939 111607968 111607975 111607979 111608491 111609960 111610161 111611259 111611270 111612085

XCO:

XHE:

GAF:

CTUL:

GMU:

KMR:

LCF:

XGL:

OTW:

OMY:

SALP:

ELS:	114831072 114831081 114831082 114831083 114831084 114835905 114835913 114835914 114835915

SFM:	114909713 114909714

PKI:

AANG:

PSPA:

ARUT:

CMK:

BFO:

SCLV:

SPU:

SKO:

DME:	Dmel_CR40454(5.8SrRNA:CR40454) Dmel_CR45839(5.8SrRNA:CR45839) Dmel_CR45842(5.8SrRNA:CR45842) Dmel_CR45852(5.8SrRNA:CR45852)

DMO:	Dmoj_GI24898(Dmoj_5.8SrRNA:GI24898) Dmoj_GI24899(Dmoj_5.8SrRNA:GI24899) Dmoj_GI24900(Dmoj_5.8SrRNA:GI24900) Dmoj_GI24916(Dmoj_5.8SrRNA:GI24916) Dmoj_GI24917(Dmoj_5.8SrRNA:GI24917) Dmoj_GI24926(Dmoj_5.8SrRNA:GI24926) Dmoj_GI24927(Dmoj_5.8SrRNA:GI24927) Dmoj_GI24967(Dmoj_5.8SrRNA:GI24967)

DSV:

RSAN:

RMP:

CSCU:

SDM:

CEL:	CELE_F31C3.11(rrn-2.1)

PCAN:

GAE:

CRG:

PMAX:

CME:	CYME_CMQ304R CYME_CMQ402R CYME_CMR207R

ERC:	Ecym_4196 Ecym_4200

LTH:	KLTH0H13203r KLTH0H13210r KLTH0H13227r KLTH0H13249r

ZRO:	ZYRO0E10112r ZYRO0E10127r

NCS:	NCAS_RDN58-1 NCAS_RDN58-2

NDI:	NDAI_RDN58-1

TPF:	TPHA_RDN58-1

TBL:	TBLA_RDN58-1a TBLA_RDN58-2a

TDL:	TDEL_RDN58-1 TDEL_RDN58-2 TDEL_RDN58-3

KAF:	KAFR_RDN58-1(RDN58-1)

CAL:	CAALFM_CR08790WA(RDN58)

TOT:	TOT_01r000003 TOT_03r000003

LMA:	LMJF27_rRNA_07 LMJF27_rRNA_08 LMJF27_rRNA_09 LMJF27_rRNA_10 LMJF27_rRNA_11 LMJF27_rRNA_12

LDO:	LDBPK_27rRNA5

» show all

Reference

PMID:1252408

Authors

Nazar RN, Sitz TO, Busch H

Title

Sequence homologies in mammalian 5.8S ribosomal RNA.

Journal

Biochemistry 15:505-8 (1976)
DOI:10.1021/bi00648a008

Sequence

[hsa:106632260]

Reference

PMID:20011513

Authors

Poll G, Braun T, Jakovljevic J, Neueder A, Jakob S, Woolford JL Jr, Tschochner H, Milkereit P

Title

rRNA maturation in yeast cells depleted of large ribosomal subunit proteins.

Journal

PLoS One 4:e8249 (2009)
DOI:10.1371/journal.pone.0008249

Reference

PMID:23636399

Authors

Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R

Title

Structures of the human and Drosophila 80S ribosome.

Journal

Nature 497:80-5 (2013)
DOI:10.1038/nature12104

Sequence

[dme:Dmel_CR40454]

LinkDB

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