KEGG   ORTHOLOGY: K18523
Entry
K18523            RNA       KO                                     
Symbol
omrB, rygB
Name
small regulatory RNA OmrB
Pathway
map02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ko00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    K18523  omrB, rygB; small regulatory RNA OmrB
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis
    K18523  omrB, rygB; small regulatory RNA OmrB
  09184 RNA family
   03100 Non-coding RNAs
    K18523  omrB, rygB; small regulatory RNA OmrB
Messenger RNA biogenesis [BR:ko03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Bacterial Small RNA Regulators
     K18523  omrB, rygB; small regulatory RNA OmrB
Non-coding RNAs [BR:ko03100]
 Other RNA
  Unclassified
   K18523  omrB, rygB; small regulatory RNA OmrB
Genes
ECO: b4445(omrB)
ECJ: JWR0249(rygB)
ECD: ECDH10B_3008(rygB)
EBW: BWG_4246(omrB)
ECOK: ECMDS42_2344(rygB)
ECF: ECH74115_4105
EOI: ECO111_ncRNA48(omrB)
EOJ: ECO26_ncRNA48(omrB)
EOH: ECO103_ncRNA49(omrB)
ECK: EC55989miscRNA68(omrB)
ECG: E2348C_ncR_48(omrB)
EOK: G2583_3493
ECX: EcHS_A4770
ECR: ECIAI1_miscRNA_62(omrB)
ECQ: ECED1_misc_RNA_61(omrB)
EUM: ECUMN_misc_RNA_54(omrB)
ECT: ECIAI39_miscRNA74(omrB)
ECZ: ECS88_misc_RNA_61(omrB)
EDJ: ECDH1ME8569_o0055(rygB)
ELW: ECW_nc3081(omrB)
ELF: LF82_s1569(omrB)
ECOI: ECOPMV1_03126
EFE: EFER_misc_RNA_46(omrB)
SEY: OmrB(OmrB)
SPQ: SPAB_03748
SEH: SeHA_C3225
SHB: SU5_nc125
SEE: SNSL254_A3240
SEW: SeSA_A3177
SEA: SeAg_B3159
SED: SeD_A3341
SES: SARI_04647
ESA: ESA_00471
CKO: CKO_04210
EBF: D782_0881
ETA: etchr10005(SraE)
PAM: PANA_ncRNA19(sraE)
 » show all
Reference
PMID:16359331
  Authors
Guillier M, Gottesman S
  Title
Remodelling of the Escherichia coli outer membrane by two small regulatory RNAs.
  Journal
Mol Microbiol 59:231-47 (2006)
DOI:10.1111/j.1365-2958.2005.04929.x
  Sequence
[eco:b4445]
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