KEGG   ORTHOLOGY: K28181
Entry
K28181            RNA       KO                                     
Symbol
sdsR, ryeB
Name
small regulatory RNA SdsR
Brite
KEGG Orthology (KO) [BR:ko00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system
    K28181  sdsR, ryeB; small regulatory RNA SdsR
  09184 RNA family
   03100 Non-coding RNAs
    K28181  sdsR, ryeB; small regulatory RNA SdsR
Prokaryotic defense system [BR:ko02048]
 Toxin-antitoxin system (TA system)
  Type VIII TA system
   SdsR-RyeA
    K28181  sdsR, ryeB; small regulatory RNA SdsR
Non-coding RNAs [BR:ko03100]
 Other prokaryotic RNA
  Small regulatory RNA
   K28181  sdsR, ryeB; small regulatory RNA SdsR
Genes
ECO: b4433(sdsR)
ECJ: JWR0238(ryeB)
ECD: ECDH10B_1979(ryeB)
EBW: BWG_4228(ryeB)
ECOK: ECMDS42_1515(ryeB)
ECF: ECH74115_2572
EOI: ECO111_ncRNA26(ryeB)
EOJ: ECO26_ncRNA28(ryeB)
EOH: ECO103_ncRNA25(ryeB)
ECK: EC55989miscRNA40(ryeB)
ECG: E2348C_ncR_26(ryeB)
EOK: G2583_2290
ECX: EcHS_A4749
ECR: ECIAI1_miscRNA_34(ryeB)
ECQ: ECED1_misc_RNA_33(ryeB)
EUM: ECUMN_misc_RNA_29(ryeB)
ECT: ECIAI39_miscRNA31(ryeB)
EBL: ECD_n04325(sdsR)
ECZ: ECS88_misc_RNA_32(ryeB)
ELW: ECW_nc2011(ryeB)
ELF: LF82_s2065(ryeB)
ECOI: ECOPMV1_01931
EFE: EFER_misc_RNA_26(ryeB)
SEY: SdsR(SdsR)
SPQ: SPAB_01297
SEH: SeHA_C2086
SHB: SU5_nc88
SEE: SNSL254_A2031
SEW: SeSA_A2025
SEA: SeAg_B1253
SED: SeD_A1377
SES: SARI_01074
SBC: SbBS512_E2199
ESA: ESA_01402
REE: electrica_01887
CKO: CKO_01128
EBF: D782_1800
YPH: YPC_2491(ryeB)
YPA: YPA_r043
YPN: YPN_r073
YPP: YPDSF_R0024
YPG: YpAngola_A4228
YPS: YPTB_RNA_120
YPI: YpsIP31758_4315
YEN: misc_RNA.20
YEE: YE5303miscRNA0039
SMAF: D781_2605
ECA: ryeB(ryeB)
PATO: GZ59_20860(ryeB)
PVZ: OA04_24210(ryeB)
DDD: Dda3937_04692(ryeB)
PAM: PANA_ncRNA25(ryeB)
SON: SO_m032(ryeB)
SBK: SHEWBE_MISCRNA23
 ยป show all
Reference
PMID:30293519
  Authors
Choi JS, Kim W, Suk S, Park H, Bak G, Yoon J, Lee Y
  Title
The small RNA, SdsR, acts as a novel type of toxin in Escherichia coli.
  Journal
RNA Biol 15:1319-1335 (2018)
DOI:10.1080/15476286.2018.1532252
  Sequence
[eco:b4433]
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