KEGG ORTHOLOGY: K28312

KEGG

ORTHOLOGY: K28312

Entry

K28312            RNA       KO

Symbol

SCARNA21, ACA68

Name

small Cajal body-specific RNA 21

Brite

KEGG Orthology (KO) [BR:ko00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome
    K28312  SCARNA21, ACA68; small Cajal body-specific RNA 21
  09184 RNA family
   03100 Non-coding RNAs
    K28312  SCARNA21, ACA68; small Cajal body-specific RNA 21
Spliceosome [BR:ko03041]
Splicing related RNAs
  K28312  SCARNA21, ACA68; small Cajal body-specific RNA 21
Non-coding RNAs [BR:ko03100]
Other eukaryotic RNA
  Small Cajal body-specific RNA
   K28312  SCARNA21, ACA68; small Cajal body-specific RNA 21

Genes

HSA:	107397391(SCARNA21B) 124900541 677763(SCARNA21)

PTR:	112206179 112207393 112208272

PPS:	112437670 112438586 112438995

GGO:	115931343 115932390 115933646

PON:	112129811 112131440 112132195

PPYG:

129018523 129023974 129030984

NLE:	115831642 115831643 115833121

HMH:	116459526 116481350 116814014

SSYN:

129468725 129470857 129472774

MCC:	114672032 114673320 114675193

MCF:	123568518 123569638 123571175

MTHB:

126934557 126940059 126945491

MNI:	112425131 112425335 112426372

PANU:

116270436 116271155 116272419

TGE:	112605482 112610493 112616274

RRO:	115892571 115894452 115895055

TFN:	117063158 117068113 117094081

PTEH:

111527104 111527308 111554523

CJC:	118143501 118147620 118154386

CIMI:

119468077 119471057 119471763

ANAN:

135269567 135269835 135275787

LCAT:

123621415 123630908 123637644 123644262 123647885

OGA:	111723235 111723724 111724405 111724677 111724747 111725719 111726636 111728467

MMU:	115487906(Gm22442) 115487907(Gm23386) 115489635(Gm24644)

MCAL:

115030540 115030541 115032715

RNO:	120095464(Scarna21) 120102093

MCOC:

116079468 116079469 116092810

ANU:	117704825 117712217 117715884

ASYL:

127686598 127695733

MUN:	132646623 132649102

CGE:	113832627 113833237 113836982

MAUA:

121137362 121140605 121141678

PROB:

127214735 127219885

PLEU:

114693256 114699015

PMAV:

121829246 121831930

MORG:

121457213 121465904

MFOT:

126496866 126504729 126514148

AAMP:

119813865 119815971 119815972

CPOC:

111754034 111755217 111755756

DSP:	122100461 122117957

DMER:

138813352 138834268

PLOP:

125362792 125366612

NCAR:

124960845 124981568

MMMA:

125612188 125614828 125615044 125616482

ITI:	120884671 120886023 120887075 120890192

OCU:

OPI:

OCZ:

CFA:	119870572 119872071

CLUD:

112647689 112660692

VVP:	112908487 112925034

VLG:	121498380 121501086

NPO:	129497991 129514330

AML:

UMR:

UAH:

UAR:

LLV:

MNP:

MLK:

NVS:

EJU:

ZCA:

MLX:

NSU:

LWW:

FCA:

PYU:

PCOO:

PBG:

PVIV:

LRUF:

LGF:

AJU:

PUC:

PLEZ:

HHV:

BTA:

BOM:

BBUB:

OAS:

BTAX:

CSUM:

ODA:

CCAD:

MREE:

OVR:

MBEZ:

CFR:	116656904 116668361 116668787

CDK:	116156990 116157325 116158017

VPC:	116279775 116283021 116283243

BMUS:

OOR:

LALB:

GMF:

DDP:

DLE:

PCAD:

PSIU:

PPHC:

NASI:

ECB:

EPZ:

EAI:

MMYO:

118659512 118672576

MLF:	111823204 111823459 111825365 111826333

MDT:	132219477 132236355

MYUM:

138995264 138998711 139001468 139009683 139011944 139017130

PKL:

EFUS:

114227086 114228590

DRO:

SHON:

AJM:

PDIC:

PHAS:

123809542 123833390

MMF:

PPAM:

RFQ:

PALE:

112471448 112480151

PGIG:

120589983 120600491

PVP:	111738900 111744892

RAY:	118604463 118604464

MJV:

TOD:

SFUM:

130024522 130025915 130027022

SETR:

125998501 126010246 126014864

LAV:

TMU:

ETF:	115870623 115873421

DNM:	111764059 111764624

GAS:

SHR:

AFZ:

TVP:

PBRV:

MLAO:

Reference

Authors

Schattner P, Barberan-Soler S, Lowe TM

Title

A computational screen for mammalian pseudouridylation guide H/ACA RNAs.

Journal

RNA 12:15-25 (2006)
DOI:10.1261/rna.2210406

Sequence

[hsa:677763]

Reference

Authors

Jorjani H, Kehr S, Jedlinski DJ, Gumienny R, Hertel J, Stadler PF, Zavolan M, Gruber AR

Title

An updated human snoRNAome.

Journal

Nucleic Acids Res 44:5068-82 (2016)
DOI:10.1093/nar/gkw386

LinkDB

DBGET integrated database retrieval system