KEGG ORTHOLOGY: K28505

ORTHOLOGY: K28505

Entry

K28505            RNA       KO

Symbol

SNOR100

Name

small nucleolar RNA SNOR100

Brite

KEGG Orthology (KO) [BR:ko00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis
    K28505  SNOR100; small nucleolar RNA SNOR100
  09184 RNA family
   03100 Non-coding RNAs
    K28505  SNOR100; small nucleolar RNA SNOR100
Ribosome biogenesis [BR:ko03009]
Related small nucleolar RNAs
  Box H/ACA snoRNAs
   SnoRNAs act as guides for pseudouridynation
    K28505  SNOR100; small nucleolar RNA SNOR100
Non-coding RNAs [BR:ko03100]
Small nucleolar RNA
  K28505  SNOR100; small nucleolar RNA SNOR100

Genes

ATH:	AT5G01495 AT5G01505 AT5G01515

CRB:	111830252 111830309 111830310

BRP:	117129459 117132296 117133235

BNA:	125579683 125582833 125584935 125584936 125589636 125593752 125607837

RSZ:	130498224 130498225 130498226 130508882 130508889 130508890 130508892 130510294 130510295 130510296 130510297

CIT:	112496443 112497777 112497778 112498017 112498443 112499432

PVY:	116118505 116118510 116125211 116136457 116136458

MINC:

123193779 123219850

GRA:

128041495

GHI:	121218059 121230194

GAB:

128293638

HSYR:

120118883 120118884 120123118 120123119 120131096 120147778

EGR:	120289253 120289254 120293057

RARG:

115748237 115748238

GMX:	112998423 113000287

GSJ:	114377742 114397808

PVU:	137833794 137833796

VAR:

128197597

VUN:	114189325 114189326

VUM:

124828715

CCAJ:

114916224

APRC:

113851734

MTR:	112420562 25491099

TPRA:

123919234 123919235 123919236

CAM:	113785604 113786826 113787358

PSAT:

127089978 127089979 127089981 127089982

VVO:	131593857 131593859 131623422 131636356

LJA:

130727131

ADU:

127742566

AHF:	112714741 112725754

PCIN:

AANS:

RCN:

PDUL:

MDM:	114819893 114824284

MSYL:

126617539

PCOX:

137716662 137743966

ZJU:	112490802 112491142

MNT:	112090700 112091229

CSAV:

CSV:

CMO:

BHJ:

CMAX:

CMOS:

CPEP:

RCU:	112535581 112536914

MEAN:

126666412 126670851

JCU:	119371408 119371410 119371411 119371412 119371413

MESC:

122721432 122721650 122722565

POP:	112323696 112324220 112324400 112325397 112326715 112327058

PALZ:

118039427 118044244 118044907 118050075 118057653

PNZ:	133668865 133679027 133684400 133693048

JRE:	118344641 118349534

CILL:

122293079

CAVE:

132164837 132185984 132185985 132191176

AGLU:

133865128 133878732

QSU:	112005226 112005227 112018925 136065717

QLO:	115956262 115958705 115958706

CSAA:

142608504 142641821 142641822

TWL:	119980177 119981522 119986370 119986371 119987604 120004645 120004646 120004648 120004649

VVI:

132253993

VRI:

117917183

SLY:	112940584 112940804 112941733 112941734

SPEN:

114075420 114075801 114077692 114077693

SSTN:

125854049 125863488 125875304 125875305

SDUL:

129871876 129888172 129888174 129901780 129901781

CANN:

124886905 124886906 124887573 124890983 124892479 124893384

LBB:	132608536 132608537 132616402 132629663 132634545

NSY:	138874266 138886648

NTO:	117273672 117275594

ITR:	116018047 116018048

SSPL:

121749958 121763102 121788147 121788148 121788431

SMIL:

SHIS:

APAN:

HPUM:

PHUA:

PEBU:

PTAB:

HAN:	118483109 118483112 118483113

ECAD:

122584077

LSV:	111878793 111878794

CCAV:

112513874 112516070

DCR:

135148609

AEW:	130771165 130795916

DLT:

SOE:

ATRI:

SLAF:

MOF:	131150052 131152522 131159086

MING:

122071724 122086952 122090320

TSS:	122638429 122641173 122646970 122646973 122660612 122670164 122670165

PSOM:

113300886 113314654 113340708 113354863 113354864 113354865 113354866 113354867 113354868 113354869 113354870 113354871 113354873

OBR:	121053355 121054591

OGL:	127760913 127775288

BDI:	112271206 112271208

ATS:	120962242 120973071 120973072 120973073

TDC:	119273907 119283041 119290385 119296906 119304701 119351087 119351088

TAES:

123063919 123073176 123073177 123081229 123109365 123152150 123152155 123183879 123183880 123183881

TUA:	125526186 125526187 125533367 125549759 125549760

HVG:	123423987 123445861 123451634

LPER:

127327993 127327994 127346315

LRD:	124650761 124650762 124668879 124668880

ZMA:	111589640 111590048

MFLO:

136455781 136462134 136462135 136519286

SVS:	117851085 117859365

PVIR:

120668282 120677114 120701677 120710921

PHAI:

112888204 112896090

PAUA:

133885974 133891515 133910376 133929941

TANG:

140776852

PDA:

120112975

EGU:	114912713 114913675 114914061 114914283 114914812 140858323 140858324 140858325

MUS:

135621366

ZOF:	121983655 121988237

DCT:

114581315

MSIN:

131230143 131254654

ACAK:

137943314 137966766 137966767 137966768

NCOL:

116263470

» show all

Reference

PMID:32806552

Authors

Streit D, Shanmugam T, Garbelyanski A, Simm S, Schleiff E

Title

The Existence and Localization of Nuclear snoRNAs in Arabidopsis thaliana Revisited.

Journal

Plants (Basel) 9:plants9081016 (2020)
DOI:10.3390/plants9081016

Sequence

[ath:AT5G01515 AT5G01495]

Reference

PMID:19357091

Authors

Chen HM, Wu SH

Title

Mining small RNA sequencing data: a new approach to identify small nucleolar RNAs in Arabidopsis.

Journal

Nucleic Acids Res 37:e69 (2009)
DOI:10.1093/nar/gkp225

Sequence

[ath:AT5G01505]

LinkDB

DBGET integrated database retrieval system