| Entry |
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| Name |
Polyamine biosynthesis, arginine => ornithine => putrescine
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| Definition |
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| Diagram |
| M00134 | Polyamine biosynthesis, arginine => ornithine => putrescine |
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| Class |
Pathway modules; Amino acid metabolism; Polyamine biosynthesis
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| Pathway |
| map00330 | Arginine and proline metabolism |
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| Orthology |
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| Complete |
| ptr | Pan troglodytes (chimpanzee) |
| pps | Pan paniscus (bonobo) |
| ggo | Gorilla gorilla gorilla (western lowland gorilla) |
| pon | Pongo abelii (Sumatran orangutan) |
| ppyg | Pongo pygmaeus (Bornean orangutan) |
| nle | Nomascus leucogenys (northern white-cheeked gibbon) |
| hmh | Hylobates moloch (silvery gibbon) |
| ssyn | Symphalangus syndactylus (siamang) |
| mcc | Macaca mulatta (rhesus monkey) |
| mcf | Macaca fascicularis (crab-eating macaque) |
| mthb | Macaca thibetana thibetana (Pere David's macaque) |
| mni | Macaca nemestrina (pig-tailed macaque) |
| csab | Chlorocebus sabaeus (green monkey) |
| caty | Cercocebus atys (sooty mangabey) |
| panu | Papio anubis (olive baboon) |
| tge | Theropithecus gelada (gelada) |
| mleu | Mandrillus leucophaeus (drill) |
| rro | Rhinopithecus roxellana (golden snub-nosed monkey) |
| rbb | Rhinopithecus bieti (black snub-nosed monkey) |
| tfn | Trachypithecus francoisi (Francois's langur) |
| pteh | Piliocolobus tephrosceles (Ugandan red Colobus) |
| cang | Colobus angolensis palliatus (Angola colobus) |
| cjc | Callithrix jacchus (white-tufted-ear marmoset) |
| sbq | Saimiri boliviensis boliviensis (Bolivian squirrel monkey) |
| cimi | Cebus imitator (Panamanian white-faced capuchin) |
| anan | Aotus nancymaae (Ma's night monkey) |
| csyr | Carlito syrichta (Philippine tarsier) |
| mmur | Microcebus murinus (gray mouse lemur) |
| lcat | Lemur catta (Ring-tailed lemur) |
| eruf | Eulemur rufifrons (Bennett's brown lemur) |
| pcoq | Propithecus coquereli (Coquerel's sifaka) |
| oga | Otolemur garnettii (small-eared galago) |
| mmu | Mus musculus (house mouse) |
| mcal | Mus caroli (Ryukyu mouse) |
| mpah | Mus pahari (shrew mouse) |
| rno | Rattus norvegicus (rat) |
| mcoc | Mastomys coucha (southern multimammate mouse) |
| anu | Arvicanthis niloticus (African grass rat) |
| asyl | Apodemus sylvaticus (European woodmouse) |
| mun | Meriones unguiculatus (Mongolian gerbil) |
| cge | Cricetulus griseus (Chinese hamster) |
| maua | Mesocricetus auratus (golden hamster) |
| prob | Phodopus roborovskii (desert hamster) |
| pleu | Peromyscus leucopus (white-footed mouse) |
| pmav | Peromyscus maniculatus bairdii (prairie deer mouse) |
| morg | Microtus oregoni (creeping vole) |
| mfot | Alexandromys fortis (reed vole) |
| aamp | Arvicola amphibius (Eurasian water vole) |
| cnl | Chionomys nivalis (European snow vole) |
| ngi | Nannospalax galili (Upper Galilee mountains blind mole rat) |
| hgl | Heterocephalus glaber (naked mole-rat) |
| cpoc | Cavia porcellus (domestic guinea pig) |
| ccan | Castor canadensis (American beaver) |
| dord | Dipodomys ordii (Ord's kangaroo rat) |
| dsp | Dipodomys spectabilis (banner-tailed kangaroo rat) |
| dmer | Dipodomys merriami (Merriam's kangaroo rat) |
| plop | Perognathus longimembris pacificus (Pacific pocket mouse) |
| ncar | Sciurus carolinensis (gray squirrel) |
| mmma | Marmota marmota marmota (Alpine marmot) |
| iti | Ictidomys tridecemlineatus (thirteen-lined ground squirrel) |
| ocu | Oryctolagus cuniculus (rabbit) |
| opi | Ochotona princeps (American pika) |
| ocz | Ochotona curzoniae (black-lipped pika) |
| tup | Tupaia chinensis (Chinese tree shrew) |
| gvr | Galeopterus variegatus (Sunda flying lemur) |
| cfa | Canis lupus familiaris (dog) |
| clud | Canis lupus dingo (dingo) |
| vvp | Vulpes vulpes (red fox) |
| vlg | Vulpes lagopus (Arctic fox) |
| npo | Nyctereutes procyonoides (raccoon dog) |
| aml | Ailuropoda melanoleuca (giant panda) |
| umr | Ursus maritimus (polar bear) |
| uah | Ursus arctos (brown bear) |
| uar | Ursus americanus (American black bear) |
| elk | Enhydra lutris kenyoni (northern sea otter) |
| llv | Lutra lutra (Eurasian river otter) |
| mpuf | Mustela putorius furo (domestic ferret) |
| mnp | Mustela nigripes (black-footed ferret) |
| mlk | Mustela lutreola (European mink) |
| nvs | Neogale vison (American mink) |
| oro | Odobenus rosmarus divergens (Pacific walrus) |
| eju | Eumetopias jubatus (Steller sea lion) |
| zca | Zalophus californianus (California sea lion) |
| mlx | Mirounga leonina (Southern elephant seal) |
| nsu | Neomonachus schauinslandi (Hawaiian monk seal) |
| lww | Leptonychotes weddellii (Weddell seal) |
| fca | Felis catus (domestic cat) |
| pyu | Herpailurus yagouaroundi (jaguarundi) |
| pcoo | Puma concolor (puma) |
| pbg | Prionailurus bengalensis (leopard cat) |
| pviv | Prionailurus viverrinus (fishing cat) |
| lgf | Leopardus geoffroyi (Geoffroy's cat) |
| aju | Acinonyx jubatus (cheetah) |
| ptg | Panthera tigris altaica (Amur tiger) |
| ppad | Panthera pardus (leopard) |
| puc | Panthera uncia (snow leopard) |
| hhv | Hyaena hyaena (striped hyena) |
| biu | Bos indicus (zebu cattle) |
| bbub | Bubalus bubalis (water buffalo) |
| bke | Bubalus kerabau (carabao) |
| bbis | Bison bison bison (American bison) |
| btax | Budorcas taxicolor (takin) |
| csum | Capricornis sumatraensis (Sumatran serow) |
| oda | Oryx dammah (scimitar-horned oryx) |
| ccad | Cervus canadensis (wapiti) |
| mree | Muntiacus reevesi (Reeves' muntjac) |
| ovr | Odocoileus virginianus (white-tailed deer) |
| mbez | Moschus berezovskii (Chinese forest musk deer) |
| cfr | Camelus ferus (Wild Bactrian camel) |
| cbai | Camelus bactrianus (Bactrian camel) |
| cdk | Camelus dromedarius (Arabian camel) |
| vpc | Vicugna pacos (alpaca) |
| bacu | Balaenoptera acutorostrata scammoni (minke whale) |
| bmus | Balaenoptera musculus (blue whale) |
| lve | Lipotes vexillifer (Yangtze River dolphin) |
| oor | Orcinus orca (killer whale) |
| lalb | Lagenorhynchus albirostris (white-beaked dolphin) |
| gmf | Globicephala melas (long-finned pilot whale) |
| ddp | Delphinus delphis (saddleback dolphin) |
| dle | Delphinapterus leucas (beluga whale) |
| pcad | Physeter macrocephalus (sperm whale) |
| psiu | Phocoena sinus (vaquita) |
| pphc | Phocoena phocoena (harbor porpoise) |
| nasi | Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) |
| ecb | Equus caballus (horse) |
| epz | Equus przewalskii (Przewalski's horse) |
| myb | Myotis brandtii (Brandt's bat) |
| myd | Myotis davidii (David's myotis) |
| mmyo | Myotis myotis (greater mouse-eared bat) |
| mlf | Myotis lucifugus (little brown bat) |
| mdt | Myotis daubentonii (Daubenton's bat) |
| myum | Myotis yumanensis (Yuma myotis) |
| pkl | Pipistrellus kuhlii (Kuhl's pipistrelle) |
| efus | Eptesicus fuscus (big brown bat) |
| mna | Miniopterus natalensis (Natal long-fingered bat) |
| dro | Desmodus rotundus (common vampire bat) |
| shon | Sturnira hondurensis |
| ajm | Artibeus jamaicensis (Jamaican fruit-eating bat) |
| pdic | Phyllostomus discolor (pale spear-nosed bat) |
| phas | Phyllostomus hastatus (greater spear-nosed bat) |
| mmf | Molossus molossus (Pallas's mastiff bat) |
| ppam | Pteronotus mesoamericanus (Parnell's mustached bat) |
| hai | Hipposideros armiger (great roundleaf bat) |
| rfq | Rhinolophus ferrumequinum (greater horseshoe bat) |
| pale | Pteropus alecto (black flying fox) |
| pgig | Pteropus vampyrus (Indian flying fox) |
| pvp | Pteropus vampyrus (large flying fox) |
| ray | Rousettus aegyptiacus (Egyptian rousette) |
| mjv | Manis javanica (Malayan pangolin) |
| tod | Talpa occidentalis (Iberian mole) |
| sara | Sorex araneus (European shrew) |
| sfum | Sorex fumeus (smoky shrew) |
| setr | Suncus etruscus (white-toothed pygmy shrew) |
| lav | Loxodonta africana (African savanna elephant) |
| tmu | Trichechus manatus latirostris (Florida manatee) |
| etf | Echinops telfairi (small Madagascar hedgehog) |
| dnm | Dasypus novemcinctus (nine-banded armadillo) |
| mdo | Monodelphis domestica (gray short-tailed opossum) |
| gas | Gracilinanus agilis (agile gracile opossum) |
| shr | Sarcophilus harrisii (Tasmanian devil) |
| afz | Antechinus flavipes (yellow-footed antechinus) |
| pcw | Phascolarctos cinereus (koala) |
| tvp | Trichosurus vulpecula (common brushtail) |
| pbrv | Petaurus breviceps papuanus (sugar glider) |
| mlao | Macrotis lagotis (bilby) |
| oaa | Ornithorhynchus anatinus (platypus) |
| tacu | Tachyglossus aculeatus (Australian echidna) |
| gga | Gallus gallus (chicken) |
| pcoc | Phasianus colchicus (Ring-necked pheasant) |
| mgp | Meleagris gallopavo (turkey) |
| cjo | Coturnix japonica (Japanese quail) |
| tpai | Tympanuchus pallidicinctus (lesser prairie-chicken) |
| lmut | Lagopus muta (rock ptarmigan) |
| nmel | Numida meleagris (helmeted guineafowl) |
| apla | Anas platyrhynchos (mallard) |
| aacu | Anas acuta (northern pintail) |
| acyg | Anser cygnoides (swan goose) |
| cata | Cygnus atratus (black swan) |
| aful | Aythya fuligula (tufted duck) |
| tgu | Taeniopygia guttata (zebra finch) |
| lsr | Lonchura striata (white-rumped munia) |
| scan | Serinus canaria (common canary) |
| pmoa | Passer montanus (Eurasian tree sparrow) |
| otc | Onychostruthus taczanowskii (white-rumped snowfinch) |
| pruf | Pyrgilauda ruficollis (rufous-necked snowfinch) |
| atrc | Agelaius tricolor (tricolored blackbird) |
| gfr | Geospiza fortis (medium ground-finch) |
| fab | Ficedula albicollis (collared flycatcher) |
| oma | Oenanthe melanoleuca (Eastern black-eared wheatear) |
| phi | Pseudopodoces humilis (Tibetan ground-tit) |
| pmaj | Parus major (Great Tit) |
| ccae | Cyanistes caeruleus (blue tit) |
| ccw | Corvus cornix (hooded crow) |
| cbrc | Corvus brachyrhynchos (American crow) |
| acoe | Aphelocoma coerulescens (scrub jay) |
| etl | Empidonax traillii (willow flycatcher) |
| zab | Zonotrichia albicollis (white-throated sparrow) |
| zle | Zonotrichia leucophrys gambelii (white-crowned sparrow) |
| achl | Acanthisitta chloris (rifleman) |
| svg | Sturnus vulgaris (common starling) |
| mmea | Malurus melanocephalus (red-backed fairy wren) |
| hrt | Hirundo rustica (Barn swallow) |
| sati | Sylvia atricapilla (blackcap) |
| cfai | Chamaea fasciata (wrentit) |
| ccic | Cinclus cinclus (white-throated dipper) |
| fpg | Falco peregrinus (peregrine falcon) |
| fch | Falco cherrug (Saker falcon) |
| ccri | Cariama cristata (Red-legged seriema) |
| nnt | Nestor notabilis (Kea) |
| shab | Strigops habroptila (Kakapo) |
| acun | Athene cunicularia (burrowing owl) |
| sura | Strix uralensis (Ural owl) |
| tala | Tyto alba (Barn owl) |
| achc | Aquila chrysaetos chrysaetos (golden eagle) |
| hald | Haliaeetus albicilla (white-tailed eagle) |
| hle | Haliaeetus leucocephalus (bald eagle) |
| agen | Astur gentilis (Northern goshawk) |
| hhar | Harpia harpyja (harpy eagle) |
| bbut | Buteo buteo (common buzzard) |
| gcl | Gymnogyps californianus (California condor) |
| csti | Colius striatus (speckled mousebird) |
| ldi | Leptosomus discolor (cuckoo roller) |
| mnb | Merops nubicus (carmine bee-eater) |
| dpub | Dryobates pubescens (Downy woodpecker) |
| ppus | Pogoniulus pusillus (red-fronted tinkerbird) |
| avit | Apaloderma vittatum (bar-tailed trogon) |
| brhi | Buceros rhinoceros silvestris (rhinoceros hornbill) |
| egz | Egretta garzetta (little egret) |
| nni | Nipponia nippon (crested ibis) |
| pcri | Pelecanus crispus (Dalmatian pelican) |
| pcao | Phalacrocorax carbo (great cormorant) |
| padl | Pygoscelis adeliae (Adelie penguin) |
| afor | Aptenodytes forsteri (emperor penguin) |
| fga | Fulmarus glacialis (Northern fulmar) |
| cbor | Calonectris borealis (Cory's shearwater) |
| gste | Gavia stellata (red-throated loon) |
| cboy | Ciconia boyciana (Oriental stork) |
| mame | Mycteria americana (wood stork) |
| clv | Columba livia (rock pigeon) |
| cnic | Caloenas nicobarica (Nicobar pigeon) |
| mui | Mesitornis unicolor (brown roatelo) |
| pguu | Pterocles gutturalis (yellow-throated sandgrouse) |
| plet | Phaethon lepturus (White-tailed tropicbird) |
| ehs | Eurypyga helias (sunbittern) |
| cmac | Chlamydotis macqueenii (Macqueen's bustard) |
| cuca | Cuculus canorus (common cuckoo) |
| teo | Tauraco erythrolophus (red-crested turaco) |
| breg | Balearica regulorum gibbericeps (East African grey crowned-crane) |
| game | Grus americana (Whooping crane) |
| oha | Opisthocomus hoazin (hoatzin) |
| acar | Antrostomus carolinensis (chuck-will's-widow) |
| cpea | Chaetura pelagica (chimney swift) |
| cvf | Charadrius vociferus (killdeer) |
| rtd | Rissa tridactyla (black-legged kittiwake) |
| crid | Chroicocephalus ridibundus (black-headed gull) |
| lmic | Larus michahellis (yellow-legged gull) |
| narq | Numenius arquata (Eurasian curlew) |
| aam | Apteryx mantelli mantelli (North Island brown kiwi) |
| arow | Apteryx rowi (Okarito brown kiwi) |
| npd | Nothoprocta perdicaria (Chilean tinamou) |
| tgt | Tinamus guttatus (white-throated tinamou) |
| dne | Dromaius novaehollandiae (emu) |
| scam | Struthio camelus australis (South African ostrich) |
| asn | Alligator sinensis (Chinese alligator) |
| amj | Alligator mississippiensis (American alligator) |
| cpoo | Crocodylus porosus (Australian saltwater crocodile) |
| ggn | Gavialis gangeticus (Gharial) |
| pss | Pelodiscus sinensis (Chinese soft-shelled turtle) |
| ciz | Carettochelys insculpta (pitted-shelled turtle) |
| cmy | Chelonia mydas (green sea turtle) |
| ccay | Caretta caretta (Loggerhead turtle) |
| lkp | Lepidochelys kempii (Atlantic ridley) |
| nds | Natator depressus (flatback sea turtle) |
| dcc | Dermochelys coriacea (leatherback sea turtle) |
| cpic | Chrysemys picta (western painted turtle) |
| tst | Trachemys scripta elegans (red-eared slider) |
| cabi | Chelonoidis abingdonii (Abingdon island giant tortoise) |
| mrv | Mauremys reevesii (Reeves's turtle) |
| acs | Anolis carolinensis (green anole) |
| asao | Anolis sagrei ordinatus (Brown anole) |
| pvt | Pogona vitticeps (central bearded dragon) |
| sund | Sceloporus undulatus (fence lizard) |
| pbi | Python bivittatus (Burmese python) |
| pmur | Protobothrops mucrosquamatus (Taiwan habu) |
| ctig | Crotalus tigris (Tiger rattlesnake) |
| tsr | Thamnophis sirtalis (common garter snake) |
| pgut | Pantherophis guttatus (corn snake) |
| pcae | Pituophis catenifer annectens (San Diego gophersnake) |
| apri | Ahaetulla prasina (Asian vine snake) |
| ptex | Pseudonaja textilis (eastern brown snake) |
| nss | Notechis scutatus (mainland tiger snake) |
| vko | Varanus komodoensis (Komodo dragon) |
| pmua | Podarcis muralis (common wall lizard) |
| praf | Podarcis raffonei (Aeolian wall lizard) |
| zvi | Zootoca vivipara (common lizard) |
| hcg | Hemicordylus capensis (graceful crag lizard) |
| gja | Gekko japonicus (Schlegel's Japanese gecko) |
| stow | Sphaerodactylus townsendi (Townsend's least gecko) |
| emc | Eublepharis macularius (Leopard gecko) |
| xla | Xenopus laevis (African clawed frog) |
| xtr | Xenopus tropicalis (tropical clawed frog) |
| npr | Nanorana parkeri (Xizang Plateau frog) |
| rtem | Rana temporaria (common frog) |
| acat | Aquarana catesbeiana (American bullfrog) |
| pads | Pyxicephalus adspersus (African bullfrog) |
| bbuf | Bufo bufo (common toad) |
| bgar | Bufo gargarizans (Asiatic toad) |
| dtc | Dendrobates tinctorius (dyeing poison frog) |
| pwl | Pleurodeles waltl (Iberian ribbed newt) |
| muo | Microcaecilia unicolor |
| gsh | Geotrypetes seraphini (Gaboon caecilian) |
| dre | Danio rerio (zebrafish) |
| srx | Sinocyclocheilus rhinocerous |
| sanh | Sinocyclocheilus anshuiensis |
| sgh | Sinocyclocheilus grahami (golden-line barbel) |
| ccar | Cyprinus carpio (common carp) |
| caua | Carassius auratus (goldfish) |
| cgib | Carassius gibelio (silver crucian carp) |
| ptet | Puntigrus tetrazona (Sumatra barb) |
| grf | Garra rufa (doctor fish) |
| omc | Onychostoma macrolepis |
| pprm | Pimephales promelas (fathead minnow) |
| rkg | Rhinichthys klamathensis goyatoka (western speckled dace) |
| mamb | Megalobrama amblycephala (Wuchang bream) |
| cide | Ctenopharyngodon idella (grass carp) |
| cery | Chanodichthys erythropterus (predatory carp) |
| masi | Myxocyprinus asiaticus (Chinese sucker) |
| manu | Misgurnus anguillicaudatus (oriental weatherfish) |
| pdab | Paramisgurnus dabryanus (large-scale loach) |
| ipu | Ictalurus punctatus (channel catfish) |
| ifu | Ictalurus furcatus (blue catfish) |
| phyp | Pangasianodon hypophthalmus (striped catfish) |
| smeo | Silurus meridionalis (southern catfish) |
| tfd | Tachysurus fulvidraco (yellow catfish) |
| cgar | Clarias gariepinus (North African catfish) |
| ngra | Neoarius graeffei (lesser salmon catfish) |
| trn | Trichomycterus rosablanca |
| amex | Astyanax mexicanus (Mexican tetra) |
| cmao | Colossoma macropomum (tambaqui) |
| eee | Electrophorus electricus (electric eel) |
| char | Clupea harengus (Atlantic herring) |
| spil | Sardina pilchardus (sardine) |
| asad | Alosa sapidissima (American shad) |
| tru | Takifugu rubripes (torafugu) |
| tfs | Takifugu flavidus (sansaifugu) |
| tng | Tetraodon nigroviridis (spotted green pufferfish) |
| lco | Larimichthys crocea (large yellow croaker) |
| ncc | Notothenia coriiceps (black rockcod) |
| tben | Trematomus bernacchii (emerald rockcod) |
| pgeo | Pseudochaenichthys georgianus (South Georgia icefish) |
| gacu | Gymnodraco acuticeps |
| emac | Eleginops maclovinus (Patagonian blennie) |
| ely | Epinephelus lanceolatus (giant grouper) |
| efo | Epinephelus fuscoguttatus (brown-marbled grouper) |
| plep | Plectropomus leopardus (leopard coralgrouper) |
| sluc | Sander lucioperca (pikeperch) |
| ecra | Etheostoma cragini (Arkansas darter) |
| esp | Etheostoma spectabile (orangethroat darter) |
| pflv | Perca flavescens (yellow perch) |
| gat | Gasterosteus aculeatus (three-spined stickleback) |
| ppug | Pungitius pungitius (ninespine stickleback) |
| afb | Anoplopoma fimbria (sablefish) |
| clum | Cyclopterus lumpus (lumpfish) |
| pswi | Pseudoliparis swirei (Mariana hadal snailfish) |
| cana | Clinocottus analis (woolly sculpin) |
| cve | Cebidichthys violaceus (monkeyface prickleback) |
| msam | Micropterus salmoides (largemouth bass) |
| schu | Siniperca chuatsi (mandarin fish) |
| earm | Enoplosus armatus (old wife) |
| cud | Cheilinus undulatus (humphead wrasse) |
| spul | Semicossyphus pulcher (California sheephead) |
| lmix | Labrus mixtus (cuckoo wrasse) |
| htc | Halichoeres trimaculatus (threespot wrasse) |
| alat | Acanthopagrus latus (yellowfin seabream) |
| astr | Antennarius striatus (striated frogfish) |
| pklu | Pempheris klunzingeri |
| mze | Maylandia zebra (zebra mbuna) |
| onl | Oreochromis niloticus (Nile tilapia) |
| oau | Oreochromis aureus (blue tilapia) |
| ola | Oryzias latipes (Japanese medaka) |
| oml | Oryzias melastigma (Indian medaka) |
| csai | Cololabis saira (Pacific saury) |
| xma | Xiphophorus maculatus (southern platyfish) |
| xco | Xiphophorus couchianus (Monterrey platyfish) |
| xhe | Xiphophorus hellerii (green swordtail) |
| pret | Poecilia reticulata (guppy) |
| pfor | Poecilia formosa (Amazon molly) |
| plai | Poecilia latipinna (sailfin molly) |
| pmei | Poecilia mexicana (shortfin molly) |
| gaf | Gambusia affinis (western mosquitofish) |
| pprl | Poeciliopsis prolifica (blackstripe livebearer) |
| cvg | Cyprinodon variegatus (sheepshead minnow) |
| ctul | Cyprinodon tularosa (White Sands pupfish) |
| gmu | Girardinichthys multiradiatus (darkedged splitfin) |
| nfu | Nothobranchius furzeri (turquoise killifish) |
| kmr | Kryptolebias marmoratus (mangrove rivulus) |
| alim | Austrofundulus limnaeus (annual killifish) |
| nwh | Nematolebias whitei (Rio pearlfish) |
| aoce | Amphiprion ocellaris (clown anemonefish) |
| eja | Embiotoca jacksoni (black perch) |
| bfre | Brachyistius frenatus (kelp perch) |
| mcep | Mugil cephalus (flathead mullet) |
| csem | Cynoglossus semilaevis (tongue sole) |
| pov | Paralichthys olivaceus (Japanese flounder) |
| ssen | Solea senegalensis (Senegalese sole) |
| ssoe | Solea solea (common sole) |
| hhip | Hippoglossus hippoglossus (Atlantic halibut) |
| hsp | Hippoglossus stenolepis (Pacific halibut) |
| pplt | Pleuronectes platessa (European plaice) |
| smau | Scophthalmus maximus (turbot) |
| lcf | Lates calcarifer (barramundi perch) |
| sdu | Seriola dumerili (greater amberjack) |
| slal | Seriola lalandi dorsalis (Yellowtail amberjack) |
| xgl | Xiphias gladius (swordfish) |
| hcq | Hippocampus comes (tiger tail seahorse) |
| sscv | Syngnathus scovelli (Gulf pipefish) |
| sbia | Syngnathoides biaculeatus (alligator pipefish) |
| pee | Phycodurus eques (leafy seadragon) |
| ptao | Phyllopteryx taeniolatus (common seadragon) |
| bpec | Boleophthalmus pectinirostris (great blue-spotted mudskipper) |
| eny | Eucyclogobius newberryi (tidewater goby) |
| malb | Monopterus albus (swamp eel) |
| bspl | Betta splendens (Siamese fighting fish) |
| sjo | Scomber japonicus (chub mackerel) |
| ssco | Scomber scombrus (Atlantic mackerel) |
| tty | Thunnus thynnus (Atlantic bluefin tuna) |
| gmh | Gadus morhua (Atlantic cod) |
| sasa | Salmo salar (Atlantic salmon) |
| stru | Salmo trutta (river trout) |
| otw | Oncorhynchus tshawytscha (Chinook salmon) |
| omy | Oncorhynchus mykiss (rainbow trout) |
| ogo | Oncorhynchus gorbuscha (pink salmon) |
| one | Oncorhynchus nerka (sockeye salmon) |
| oki | Oncorhynchus kisutch (coho salmon) |
| oke | Oncorhynchus keta (chum salmon) |
| omm | Oncorhynchus masou masou (cherry salmon) |
| ocla | Oncorhynchus clarkii lewisi (westslope cutthroat trout) |
| salp | Salvelinus sp. IW2-2015 (Arctic char) |
| snh | Salvelinus namaycush (lake trout) |
| sfon | Salvelinus fontinalis (brook trout) |
| cclu | Coregonus clupeaformis (lake whitefish) |
| els | Esox lucius (northern pike) |
| oep | Osmerus eperlanus (European smelt) |
| sfm | Scleropages formosus (Asian bonytongue) |
| pki | Paramormyrops kingsleyae |
| aang | Anguilla anguilla (European eel) |
| arot | Anguilla rostrata (American eel) |
| ccog | Conger conger (European conger) |
| loc | Lepisosteus oculatus (spotted gar) |
| pspa | Polyodon spathula (Mississippi paddlefish) |
| arut | Acipenser ruthenus (sterlet) |
| psex | Polypterus senegalus (gray bichir) |
| lcm | Latimeria chalumnae (coelacanth) |
| cmk | Callorhinchus milii (elephant shark) |
| rtp | Rhincodon typus (whale shark) |
| cpla | Chiloscyllium plagiosum (whitespotted bambooshark) |
| cpun | Chiloscyllium punctatum (brownbanded bambooshark) |
| hoc | Hemiscyllium ocellatum (epaulette shark) |
| scau | Scyliorhinus canicula (smaller spotted catshark) |
| leri | Leucoraja erinaceus (little skate) |
| haka | Hemitrygon akajei (red stingray) |
| pmrn | Petromyzon marinus (sea lamprey) |
| lrj | Lethenteron reissneri (Far Eastern brook lamprey) |
| bfo | Branchiostoma floridae (Florida lancelet) |
| bbel | Branchiostoma belcheri (Belcher's lancelet) |
| cin | Ciona intestinalis (yellow sea squirt) |
| clep | Clavelina lepadiformis (light-bulb sea squirt) |
| spu | Strongylocentrotus purpuratus (purple sea urchin) |
| lpic | Lytechinus pictus (painted urchin) |
| lvg | Lytechinus variegatus (green sea urchin) |
| aplc | Acanthaster planci (crown-of-thorns starfish) |
| arun | Luidia clathrata (European starfish) |
| aamu | Asterias amurensis (Northern Pacific seastar) |
| ajc | Anneissia japonica (feather star) |
| sko | Saccoglossus kowalevskii (acorn worm) |
| dme | Drosophila melanogaster (fruit fly) |
| dpo | Drosophila pseudoobscura |
| dpe | Drosophila persimilis |
| dwi | Drosophila willistoni |
| dmo | Drosophila mojavensis |
| ccat | Ceratitis capitata (Mediterranean fruit fly) |
| bod | Bactrocera oleae (olive fruit fly) |
| bdr | Bactrocera dorsalis (oriental fruit fly) |
| rze | Rhagoletis zephyria (snowberry fruit fly) |
| aoq | Anastrepha obliqua (West Indian fruit fly) |
| alud | Anastrepha ludens (Mexican fruit fly) |
| tda | Teleopsis dalmanni (Malaysian stalk-eyed fly) |
| mde | Musca domestica (house fly) |
| scac | Stomoxys calcitrans (stable fly) |
| lcq | Lucilia cuprina (Australian sheep blowfly) |
| lsq | Lucilia sericata (common green bottle fly) |
| cvj | Calliphora vicina (urban bluebottle blowfly) |
| gfs | Glossina fuscipes (tsetse fly) |
| clon | Condylostylus longicornis |
| his | Hermetia illucens (black soldier fly) |
| aga | Anopheles gambiae (malaria mosquito) |
| aara | Anopheles arabiensis |
| aste | Anopheles stephensi (Asian malaria mosquito) |
| amap | Anopheles maculipalpis |
| afun | Anopheles funestus (African malaria mosquito) |
| amrs | Anopheles marshallii |
| adar | Anopheles darlingi (American malaria mosquito) |
| aag | Aedes aegypti (yellow fever mosquito) |
| aalb | Aedes albopictus (Asian tiger mosquito) |
| asua | Armigeres subalbatus |
| cqu | Culex quinquefasciatus (southern house mosquito) |
| cpii | Culex pipiens pallens (northern house mosquito) |
| cbri | Culicoides brevitarsis |
| lll | Lutzomyia longipalpis |
| ppap | Phlebotomus papatasi |
| ame | Apis mellifera (honey bee) |
| acer | Apis cerana (Asiatic honeybee) |
| alab | Apis laboriosa (Himalayan honeybee) |
| aflr | Apis florea (little honeybee) |
| bim | Bombus impatiens (common eastern bumble bee) |
| bbif | Bombus bifarius (two-form bumblebee) |
| bvk | Bombus vosnesenskii (yellow-faced bumblebee) |
| bvan | Bombus vancouverensis nearcticus |
| bhun | Bombus huntii (Hunt bumble bee) |
| bter | Bombus terrestris (buff-tailed bumblebee) |
| baff | Bombus affinis (rusty patched bumble bee) |
| bpas | Bombus pascuorum (common carder bee) |
| ccal | Ceratina calcarata (carpenter bee) |
| obb | Osmia bicornis bicornis (red mason bee) |
| olg | Osmia lignaria (orchard mason bee) |
| nmea | Nomia melanderi (Alkali bee) |
| soc | Solenopsis invicta (red fire ant) |
| mpha | Monomorium pharaonis (pharaoh ant) |
| aec | Acromyrmex echinatior (Panamanian leafcutter ant) |
| acep | Atta cephalotes (leaf cutting ant) |
| mzt | Mycetomoellerius zeteki |
| ccoa | Cyphomyrmex costatus |
| tcz | Trachymyrmex cornetzi |
| tsep | Trachymyrmex septentrionalis |
| pbar | Pogonomyrmex barbatus (red harvester ant) |
| cobs | Cardiocondyla obscurior |
| tln | Temnothorax longispinosus |
| tame | Temnothorax americanus |
| hst | Harpegnathos saltator (Jerdon's jumping ant) |
| dqu | Dinoponera quadriceps |
| cfo | Camponotus floridanus (Florida carpenter ant) |
| fex | Formica exsecta (narrow-headed ant) |
| lhu | Linepithema humile (Argentine ant) |
| pgc | Pseudomyrmex gracilis (graceful twig ant) |
| obo | Ooceraea biroi (clonal raider ant) |
| pfuc | Polistes fuscatus (common paper wasp) |
| vps | Vespula pensylvanica (western yellowjacket) |
| vcrb | Vespa crabro (European hornet) |
| vve | Vespa velutina (Asian hornet) |
| nvi | Nasonia vitripennis (jewel wasp) |
| csol | Ceratosolen solmsi marchali (fig wasp) |
| tpre | Trichogramma pretiosum |
| mdl | Microplitis demolitor |
| ccin | Cephus cinctus (wheat stem sawfly) |
| npt | Neodiprion pinetum (white pine sawfly) |
| nlo | Neodiprion lecontei (redheaded pine sawfly) |
| nvg | Neodiprion virginianus |
| aroa | Athalia rosae (coleseed sawfly) |
| tca | Tribolium castaneum (red flour beetle) |
| tmol | Tenebrio molitor (yellow mealworm) |
| dpa | Dendroctonus ponderosae (mountain pine beetle) |
| efor | Euwallacea fornicatus (polyphagous shot-hole borer) |
| soy | Sitophilus oryzae (rice weevil) |
| rfg | Rhynchophorus ferrugineus (red palm weevil) |
| agrg | Anthonomus grandis grandis (boll weevil) |
| atd | Aethina tumida (small hive beetle) |
| agb | Anoplophora glabripennis (Asian longhorned beetle) |
| ldc | Leptinotarsa decemlineata (Colorado potato beetle) |
| dvv | Diabrotica virgifera virgifera (western corn rootworm) |
| nvl | Nicrophorus vespilloides (burying beetle) |
| apln | Agrilus planipennis (emerald ash borer) |
| ppyr | Photinus pyralis (common eastern firefly) |
| otu | Onthophagus taurus (bull-headed dung beetle) |
| bmor | Bombyx mori (domestic silkworm) |
| msex | Manduca sexta (tobacco hornworm) |
| dpl | Danaus plexippus (monarch butterfly) |
| bany | Bicyclus anynana (squinting bush brown) |
| mju | Maniola jurtina (meadow brown) |
| niq | Nymphalis io (European peacock) |
| vcd | Vanessa cardui (painted lady) |
| mcix | Melitaea cinxia (Glanville fritillary) |
| pmac | Papilio machaon (common yellow swallowtail) |
| ppot | Papilio polytes (common Mormon) |
| pxu | Papilio xuthus (Asian swallowtail) |
| bphi | Battus philenor (pipe-vine swallowtail) |
| prap | Pieris rapae (cabbage white) |
| pbx | Pieris brassicae (large cabbage white) |
| pnap | Pieris napi (green-veined white) |
| zce | Zerene cesonia (dogface butterfly) |
| ccrc | Colias croceus (clouded yellow) |
| lsin | Leptidea sinapis (Wood White) |
| aage | Aricia agestis (brown argus) |
| haw | Helicoverpa armigera (cotton bollworm) |
| hze | Helicoverpa zea (corn earworm) |
| tnl | Trichoplusia ni (cabbage looper) |
| sliu | Spodoptera litura (tobacco cutworm) |
| ofu | Ostrinia furnacalis (Asian corn borer) |
| onu | Ostrinia nubilalis (European corn borer) |
| atra | Amyelois transitella (navel orangeworm) |
| gmw | Galleria mellonella (greater wax moth) |
| pxy | Plutella xylostella (diamondback moth) |
| pgw | Pectinophora gossypiella (pink bollworm) |
| lgly | Leguminivora glycinivorella (soybean pod borer) |
| cfum | Choristoneura fumiferana (eastern spruce budworm) |
| cfel | Ctenocephalides felis (cat flea) |
| btab | Bemisia tabaci (sweet potato whitefly) |
| clec | Cimex lectularius (bed bug) |
| hvi | Homalodisca vitripennis (glassy-winged sharpshooter) |
| mqu | Macrosteles quadrilineatus (aster leafhopper) |
| phu | Pediculus humanus corporis (human body louse) |
| foc | Frankliniella occidentalis (western flower thrips) |
| tpal | Thrips palmi (melon thrips) |
| zne | Zootermopsis nevadensis (dampwood termite) |
| csec | Cryptotermes secundus (drywood termite) |
| pame | Periplaneta americana (American cockroach) |
| sgre | Schistocerca gregaria (desert locust) |
| bror | Bacillus rossius redtenbacheri |
| iel | Ischnura elegans (blue-tailed damselfly) |
| hamr | Hetaerina americana (American ruby spot damselfly) |
| dpx | Daphnia pulex (common water flea) |
| dmk | Daphnia magna (water flea) |
| pvm | Penaeus vannamei (Pacific white shrimp) |
| pja | Penaeus japonicus (kuruma prawn) |
| pchn | Penaeus chinensis (fleshy prawn) |
| pmoo | Penaeus monodon (black tiger shrimp) |
| hame | Homarus americanus (American lobster) |
| pcla | Procambarus clarkii (red swamp crayfish) |
| cqd | Cherax quadricarinatus (Australian red claw crayfish) |
| ptru | Portunus trituberculatus (swimming crab) |
| mnz | Macrobrachium nipponense (oriental river prawn) |
| mrj | Macrobrachium rosenbergii (giant freshwater prawn) |
| porn | Panulirus ornatus (ornate spiny lobster) |
| oot | Oratosquilla oratoria (Japanese mantis shrimp) |
| eaf | Eurytemora carolleeae |
| tcf | Tigriopus californicus (tidepool copepod) |
| ppoi | Pollicipes pollicipes (gooseneck barnacle) |
| dalb | Dermacentor albipictus (winter tick) |
| rsan | Rhipicephalus sanguineus (brown dog tick) |
| rmp | Rhipicephalus microplus (southern cattle tick) |
| vde | Varroa destructor (honeybee mite) |
| goe | Galendromus occidentalis (western predatory mite) |
| tut | Tetranychus urticae (two-spotted spider mite) |
| dpte | Dermatophagoides pteronyssinus (European house dust mite) |
| dfr | Dermatophagoides farinae (American house dust mite) |
| cscu | Centruroides sculpturatus (bark scorpion) |
| cvs | Centruroides vittatus (striped bark scorpion) |
| ptep | Parasteatoda tepidariorum (common house spider) |
| abru | Argiope bruennichi (wasp spider) |
| lpol | Limulus polyphemus (Atlantic horseshoe crab) |
| pmeo | Paramacrobiotus metropolitanus |
| cel | Caenorhabditis elegans (nematode) |
| cbr | Caenorhabditis briggsae (nematode) |
| crq | Caenorhabditis remanei (nematode) |
| nai | Necator americanus (New World hookworm) |
| lgi | Lottia gigantea (owl limpet) |
| pvul | Patella vulgata (common limpet) |
| pcan | Pomacea canaliculata (golden apple snail) |
| barl | Babylonia areolata (ivory shell) |
| bgt | Biomphalaria glabrata (bloodfluke planorb) |
| gae | Gigantopelta aegis (peltospirid snail) |
| hrf | Haliotis rufescens (red abalone) |
| hrj | Haliotis rubra (blacklip abalone) |
| hasi | Haliotis asinina (tropical abalone) |
| hcra | Haliotis cracherodii (black abalone) |
| crg | Magallana gigas (Pacific oyster) |
| canu | Magallana angulata (Portugese oyster) |
| cvn | Crassostrea virginica (eastern oyster) |
| oed | Ostrea edulis (European flat oyster) |
| myi | Mizuhopecten yessoensis (Yesso scallop) |
| pmax | Pecten maximus (king scallop) |
| airr | Argopecten irradians (bay scallop) |
| yba | Ylistrum balloti (Ballot's saucer scallop) |
| mcaf | Mytilus californianus (California mussel) |
| mmer | Mercenaria mercenaria (northern quahog) |
| rphi | Ruditapes philippinarum (Manila clam) |
| dpol | Dreissena polymorpha (zebra mussel) |
| maea | Mya arenaria (softshell) |
| obi | Octopus bimaculoides (California two-spot octopus) |
| osn | Octopus sinensis (East Asian common octopus) |
| ljp | Liolophura japonica (common chiton) |
| llon | Lineus longissimus (bootlace worm) |
| nve | Nematostella vectensis (starlet sea anemone) |
| epa | Exaiptasia diaphana (Aiptasia) |
| aten | Actinia tenebrosa (Australian red waratah sea anemone) |
| mcaz | Montipora capricornis (leaf plate montipora) |
| spis | Stylophora pistillata (Smooth Cauliflower Coral) |
| dgt | Dendronephthya gigantea (soft corals) |
| xen | Xenia sp. Carnegie-2017 (soft corals) |
| hmg | Hydra vulgaris (swiftwater hydra) |
| tad | Trichoplax adhaerens (placozoan) |
| cit | Citrus sinensis (Valencia orange) |
| cic | Citrus x clementina (clementine) |
| pvy | Pistacia vera (pistachio) |
| minc | Mangifera indica (mango) |
| tcc | Theobroma cacao (cacao) |
| ghi | Gossypium hirsutum (upland cotton) |
| gab | Gossypium arboreum (tree cotton) |
| hsyr | Hibiscus syriacus (Rose-of-Sharon) |
| dzi | Durio zibethinus (durian) |
| gmx | Glycine max (soybean) |
| gsj | Glycine soja (wild soybean) |
| pvu | Phaseolus vulgaris (common bean) |
| vra | Vigna radiata (mung bean) |
| var | Vigna angularis (adzuki bean) |
| vun | Vigna unguiculata (cowpea) |
| vum | Vigna umbellata (ricebean) |
| ccaj | Cajanus cajan (pigeon pea) |
| aprc | Abrus precatorius (Indian licorice) |
| mtr | Medicago truncatula (barrel medic) |
| tpra | Trifolium pratense (red clover) |
| cam | Cicer arietinum (chickpea) |
| psat | Lathyrus oleraceus (garden pea) |
| vvo | Vicia villosa (hairy vetch) |
| ahf | Arachis hypogaea (peanut) |
| lang | Lupinus angustifolius (narrow-leaved blue lupine) |
| fve | Fragaria vesca (woodland strawberry) |
| aans | Argentina anserina (silverweed cinquefoil) |
| rcn | Rosa chinensis (China rose) |
| pper | Prunus persica (peach) |
| pmum | Prunus mume (Japanese apricot) |
| pavi | Prunus avium (sweet cherry) |
| pdul | Prunus dulcis (almond) |
| mdm | Malus domestica (apple) |
| msyl | Malus sylvestris (European crab apple) |
| pxb | Pyrus x bretschneideri (Chinese white pear) |
| pcox | Pyrus communis (pear) |
| zju | Ziziphus jujuba (Chinese jujube) |
| csav | Cannabis sativa (hemp) |
| hlp | Humulus lupulus (common hop) |
| csv | Cucumis sativus (cucumber) |
| cmo | Cucumis melo (muskmelon) |
| bhj | Benincasa hispida (wax gourd) |
| mcha | Momordica charantia (bitter melon) |
| cmax | Cucurbita maxima (winter squash) |
| cmos | Cucurbita moschata (crookneck pumpkin) |
| cpep | Cucurbita pepo subsp. pepo (vegetable marrow) |
| rcu | Ricinus communis (castor bean) |
| mean | Mercurialis annua (annual mercury) |
| jcu | Jatropha curcas (Barbados nut) |
| hbr | Hevea brasiliensis (rubber tree) |
| mesc | Manihot esculenta (cassava) |
| pop | Populus trichocarpa (black cottonwood) |
| peu | Populus euphratica (Euphrates poplar) |
| palz | Populus alba (white poplar) |
| pnz | Populus nigra (Lombardy poplar) |
| jre | Juglans regia (English walnut) |
| cill | Carya illinoinensis (pecan) |
| cave | Corylus avellana (European hazelnut) |
| aglu | Alnus glutinosa (common alder) |
| qsu | Quercus suber (cork oak) |
| qlo | Quercus lobata (valley oak) |
| csaa | Castanea sativa (European chestnut) |
| twl | Tripterygium wilfordii (thunder duke vine) |
| vvi | Vitis vinifera (wine grape) |
| vri | Vitis riparia (riverbank grape) |
| sly | Solanum lycopersicum (tomato) |
| sot | Solanum tuberosum (potato) |
| sdul | Solanum dulcamara (climbing nightshade) |
| cann | Capsicum annuum (peppers) |
| lbb | Lycium barbarum (goji berry) |
| nta | Nicotiana tabacum (common tobacco) |
| nsy | Nicotiana sylvestris (wood tobacco) |
| nto | Nicotiana tomentosiformis |
| nau | Nicotiana attenuata (coyote tobacco) |
| ini | Ipomoea nil (Japanese morning glory) |
| itr | Ipomoea triloba (trilobed morning glory) |
| sind | Sesamum indicum (sesame) |
| apan | Andrographis paniculata |
| csin | Camellia sinensis (tea plant) |
| aew | Actinidia eriantha (wild kiwifruit) |
| nnu | Nelumbo nucifera (sacred lotus) |
| ming | Macadamia integrifolia (macadamia nut) |
| tss | Telopea speciosissima (New South Wales waratah) |
| psom | Papaver somniferum (opium poppy) |
| osa | Oryza sativa japonica (Japanese rice) |
| dosa | Oryza sativa japonica (Japanese rice) (RAPDB) |
| obr | Oryza brachyantha (malo sina) |
| ogl | Oryza glaberrima (African rice) |
| bdi | Brachypodium distachyon (stiff brome) |
| ats | Aegilops tauschii (wheat D) |
| tdc | Triticum dicoccoides (wild emmer wheat) |
| taes | Triticum aestivum (bread wheat) |
| hvg | Hordeum vulgare subsp. vulgare (domesticated barley) |
| lper | Lolium perenne (perennial ryegrass) |
| lrd | Lolium rigidum (rigid ryegrass) |
| sbi | Sorghum bicolor (sorghum) |
| mflo | Miscanthus floridulus |
| sita | Setaria italica (foxtail millet) |
| svs | Setaria viridis (green foxtail) |
| pvir | Panicum virgatum (switchgrass) |
| phai | Panicum hallii (Hall's panicgrass) |
| paua | Phragmites australis (common reed) |
| pda | Phoenix dactylifera (date palm) |
| egu | Elaeis guineensis (African oil palm) |
| aof | Asparagus officinalis (garden asparagus) |
| acak | Aristolochia californica |
| ncol | Nymphaea colorata (blue-petal water lily) |
| cjf | Cryptomeria japonica (Japanese cedar) |
| smo | Selaginella moellendorffii |
| sce | Saccharomyces cerevisiae (budding yeast) |
| seub | Saccharomyces eubayanus |
| spao | Saccharomyces paradoxus |
| ago | Eremothecium gossypii |
| erc | Eremothecium cymbalariae |
| kmx | Kluyveromyces marxianus |
| lth | Lachancea thermotolerans |
| vpo | Vanderwaltozyma polyspora |
| zro | Zygosaccharomyces rouxii |
| cgr | Nakaseomyces glabratus |
| ncs | Naumovozyma castellii |
| ndi | Naumovozyma dairenensis |
| tpf | Tetrapisispora phaffii |
| tbl | Henningerozyma blattae |
| tdl | Torulaspora delbrueckii |
| kaf | Kazachstania africana |
| zmk | Zygotorulaspora mrakii |
| dha | Debaryomyces hansenii |
| pic | Scheffersomyces stipitis |
| pgu | Meyerozyma guilliermondii |
| spaa | Spathaspora passalidarum |
| lel | Lodderomyces elongisporus |
| lbg | Lodderomyces beijingensis |
| cot | Candida orthopsilosis |
| clu | Clavispora lusitaniae ATCC 42720 |
| clus | Clavispora lusitaniae CBS 6936 |
| bbrx | Brettanomyces bruxellensis |
| opa | Ogataea parapolymorpha |
| slb | Sugiyamaella lignohabitans |
| nte | Neurospora tetrasperma |
| pbel | Podospora bellae-mahoneyi |
| ppsd | Podospora pseudocomata |
| ppsp | Podospora pseudopauciseta |
| ppsa | Podospora pseudoanserina |
| ttt | Thermothielavioides terrestris |
| mtm | Thermothelomyces thermophilus |
| cthr | Thermochaetoides thermophila |
| rthe | Remersonia thermophila |
| ppei | Pyricularia pennisetigena |
| tmn | Phaeoacremonium minimum |
| ssck | Sporothrix schenckii |
| fpu | Fusarium pseudograminearum |
| fvr | Fusarium verticillioides |
| fkr | Fusarium keratoplasticum |
| tre | Trichoderma reesei QM6a |
| trr | Trichoderma reesei RUT C-30 |
| tatv | Trichoderma atroviride |
| tasp | Trichoderma asperellum |
| maj | Metarhizium robertsii |
| mbrn | Metarhizium brunneum |
| pchm | Pochonia chlamydosporia |
| uvi | Ustilaginoidea virens |
| amus | Akanthomyces muscarius |
| plj | Purpureocillium lilacinum |
| ptkz | Purpureocillium takamizusanense |
| dcon | Drechmeria coniospora |
| cfj | Colletotrichum fioriniae |
| clup | Colletotrichum lupini |
| chig | Colletotrichum higginsianum |
| cdet | Colletotrichum destructivum |
| sapo | Scedosporium apiospermum |
| ssl | Sclerotinia sclerotiorum |
| bfu | Botrytis cinerea (gray mold) |
| mbe | Drepanopeziza brunnea |
| psco | Mollisia scopiformis |
| afm | Aspergillus fumigatus |
| ang | Aspergillus niger (black aspergilli) |
| aluc | Aspergillus luchuensis |
| ache | Aspergillus chevalieri |
| apuu | Aspergillus puulaauensis |
| pdp | Penicillium digitatum |
| ppsf | Penicillium psychrofluorescens |
| tmf | Talaromyces marneffei |
| trg | Talaromyces rugulosus |
| cpw | Coccidioides posadasii |
| abe | Trichophyton benhamiae |
| tve | Trichophyton verrucosum |
| pbl | Paracoccidioides lutzii Pb01 |
| pbn | Paracoccidioides brasiliensis |
| aje | Histoplasma mississippiense |
| bgh | Blastomyces gilchristii |
| pno | Parastagonospora nodorum |
| ptrr | Pyrenophora tritici-repentis |
| bsc | Bipolaris sorokiniana |
| aalt | Alternaria alternata |
| pfj | Pseudocercospora fijiensis |
| bcom | Baudoinia panamericana |
| spo | Schizosaccharomyces pombe (fission yeast) |
| som | Schizosaccharomyces osmophilus (fission yeast) |
| cne | Cryptococcus deneoformans JEC21 |
| cnb | Cryptococcus deneoformans B-3501A |
| cng | Cryptococcus neoformans var. grubii H99 |
| cdeu | Cryptococcus deuterogattii |
| cdec | Cryptococcus decagattii |
| cteg | Cryptococcus tetragattii |
| cbas | Cryptococcus bacillisporus |
| cdep | Cryptococcus depauperatus |
| kmg | Kwoniella mangroviensis |
| kne | Kwoniella newhampshirensis |
| kdj | Kwoniella dejecticola |
| ksn | Kwoniella shandongensis |
| kep | Kwoniella dendrophila |
| tasa | Trichosporon asahii var. asahii |
| ccac | Cutaneotrichosporon cavernicola |
| pco | Phanerochaete carnosa |
| hir | Heterobasidion irregulare |
| psq | Punctularia strigosozonata |
| fme | Fomitiporia mediterranea |
| cci | Coprinopsis cinerea (gray shag) |
| abp | Agaricus bisporus var. burnettii JB137-S8 |
| abv | Agaricus bisporus var. bisporus H97 |
| pcub | Psilocybe cubensis (magic mushroom) |
| mrr | Moniliophthora roreri |
| more | Marasmius oreades (fairy-ring mushroom) |
| scm | Schizophyllum commune |
| wic | Wallemia ichthyophaga |
| pfp | Pseudozyma flocculosa |
| sgra | Sporisorium graminicola |
| msym | Malassezia sympodialis |
| ptrc | Puccinia triticina (wheat leaf rust) |
| pstr | Puccinia striiformis f. sp. tritici (wheat yellow rust fungus) |
| mlr | Melampsora larici-populina |
| rie | Rhizophagus irregularis |
| ehi | Entamoeba histolytica |
| tet | Tetrahymena thermophila |
| ptm | Paramecium tetraurelia |
| pti | Phaeodactylum tricornutum |
| fcy | Fragilariopsis cylindrus |
| tps | Thalassiosira pseudonana |
| pif | Phytophthora infestans |
| spar | Saprolegnia parasitica |
| lmat | Leishmania martiniquensis |
| lbz | Leishmania braziliensis |
| lpan | Leishmania panamensis |
| loi | Leishmania orientalis |
| leis | Leishmania sp. Ghana 2012 LV757 |
| lenr | Leishmania enriettii |
| lein | Leishmania sp. Namibia |
| ehu | Enterobacter huaxiensis |
| ccon | Cronobacter condimenti |
| kpn | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52) |
| kpy | Klebsiella pneumoniae subsp. pneumoniae KPNIH31 |
| kpo | Klebsiella pneumoniae KCTC 2242 |
| kpr | Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 |
| kpi | Klebsiella pneumoniae CG43 |
| kpnk | Klebsiella pneumoniae Kp52.145 |
| kva | Klebsiella variicola At-22 |
| kpe | Klebsiella variicola 342 |
| kpk | Klebsiella variicola KP5-1 |
| kvd | Klebsiella variicola DX120E |
| kvq | Klebsiella variicola DSM 15968 |
| kom | Klebsiella michiganensis M1 |
| kmi | Klebsiella michiganensis RC10 |
| kok | Klebsiella oxytoca KONIH1 |
| eae | Klebsiella aerogenes KCTC 2190 |
| ear | Klebsiella aerogenes EA1509E |
| klw | Klebsiella huaxiensis |
| cfd | Citrobacter freundii CFNIH1 |
| cif | Citrobacter sp. FDAARGOS_156 |
| cie | Citrobacter sp. CRE-46 |
| cpar | Citrobacter pasteurii |
| cix | Citrobacter sp. XT1-2-2 |
| cib | Citrobacter sp. TSA-1 |
| kcy | Kluyvera cryocrescens |
| sym | Symbiopectobacterium purcellii |
| srr | Serratia plymuthica AS9 |
| srl | Serratia plymuthica 4Rx13 |
| sry | Serratia plymuthica S13 |
| slq | Serratia liquefaciens |
| ssur | Serratia surfactantfaciens |
| senp | Serratia entomophila |
| gqu | Gibbsiella quercinecans |
| ppoo | Pectobacterium polonicum |
| pacb | Pectobacterium actinidiae |
| ced | Dickeya fangzhongdai ND14b |
| dfn | Dickeya fangzhongdai DSM 101947 |
| ppho | Pantoea phytobeneficialis |
| xho | Xenorhabdus hominickii |
| lcas | Noviluteimonas caseinilytica |
| pgh | Photobacterium ganghwense |
| plas | Parasalinivibrio latis |
| psb | Pseudomonas syringae pv. syringae B728a |
| pavl | Pseudomonas avellanae |
| pcab | Pseudomonas cannabina pv. alisalensis |
| psyi | Pseudomonas syringae pv. tagetis |
| pfs | Pseudomonas fluorescens SBW25 |
| pmab | Pseudomonas marginalis |
| pen | Pseudomonas entomophila |
| psec | Pseudomonas sp. CCOS 191 |
| pez | Pseudomonas eucalypticola |
| pmuy | Pseudomonas muyukensis |
| pmam | Pseudomonas maumuensis |
| pkk | Pseudomonas kurunegalensis |
| ppao | Pseudomonas phytophila |
| psku | Pseudomonas sp. KUIN-1 |
| psns | Pseudomonas sp. NS1(2017) |
| pcr | Psychrobacter cryohalolentis |
| pali | Psychrobacter alimentarius |
| pspg | Psychrobacter sp. P2G3 |
| psyg | Psychrobacter sp. P11G5 |
| psyp | Psychrobacter sp. PAMC27889 |
| mct | Moraxella catarrhalis BBH18 |
| mcs | Moraxella catarrhalis 25240 |
| mcat | Moraxella catarrhalis 25239 |
| colw | Colwellia sp. PAMC 21821 |
| cola | Colwellia sp. Arc7-D |
| cber | Cognaticolwellia beringensis |
| cbu | Coxiella burnetii RSA 493 |
| cbs | Coxiella burnetii RSA 331 |
| cbd | Coxiella burnetii Dugway 5J108-111 |
| cbg | Coxiella burnetii CbuG_Q212 |
| cbc | Coxiella burnetii CbuK_Q154 |
| cchr | Candidiatus Paracoxiella cheracis |
| rvi | Rickettsiella viridis |
| sdf | Steroidobacter denitrificans |
| baen | Burkholderia aenigmatica |
| burk | Burkholderia sp. JP2-270 |
| psaa | Paraburkholderia sabiae |
| ptx | Pandoraea thiooxydans |
| rgu | Piscinibacter gummiphilus |
| nco | Nitrosomonas communis |
| uru | Usitatibacter rugosus |
| upl | Usitatibacter palustris |
| beba | Betaproteobacteria bacterium GR16-43 |
| mlo | Mesorhizobium japonicum MAFF 303099 |
| mln | Mesorhizobium loti NZP2037 |
| mci | Mesorhizobium ciceri biovar biserrulae |
| mcic | Mesorhizobium ciceri CC1192 |
| mop | Mesorhizobium opportunistum |
| mam | Mesorhizobium australicum |
| mamo | Mesorhizobium amorphae |
| mesw | Mesorhizobium sp. WSM1497 |
| mesm | Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 |
| mesp | Mesorhizobium sp. Pch-S |
| mhua | Mesorhizobium huakuii |
| mjr | Mesorhizobium jarvisii |
| merd | Mesorhizobium erdmanii |
| moh | Mesorhizobium onobrychidis |
| mmei | Mesorhizobium mediterraneum |
| mesj | Mesorhizobium sp. J8 |
| mesi | Mesorhizobium sp. PAMC28654 |
| mesu | Mesorhizobium sp. AR10 |
| mess | Mesorhizobium sp. ANAO-SY3R2 |
| mews | Mesorhizobium sp. WSM4904 |
| mewm | Mesorhizobium sp. WSM4906 |
| meaa | Mesorhizobium sp. AaZ16 |
| niy | Nitratireductor mangrovi |
| nki | Nitratireductor kimnyeongensis |
| nrh | Nitratireductor rhodophyticola |
| mes | Chelativorans sp. BNC1 |
| aak | Aminobacter aminovorans |
| amis | Aminobacter sp. Y103A |
| amio | Aminobacter sp. NyZ550 |
| pht | Phyllobacterium zundukense |
| phyl | Phyllobacterium sp. 628 |
| pmel | Phyllobacterium meliloti |
| pped | Phyllobacterium pellucidum |
| sme | Sinorhizobium meliloti 1021 |
| smk | Sinorhizobium meliloti AK83 |
| smq | Sinorhizobium meliloti BL225C |
| smx | Sinorhizobium meliloti SM11 |
| smi | Sinorhizobium meliloti Rm41 |
| smeg | Sinorhizobium meliloti GR4 |
| smel | Sinorhizobium meliloti 2011 |
| smer | Sinorhizobium meliloti RMO17 |
| smd | Sinorhizobium medicae |
| rhi | Sinorhizobium fredii NGR234 |
| sfh | Sinorhizobium fredii HH103 |
| sfd | Sinorhizobium fredii USDA 257 |
| six | Sinorhizobium sp. RAC02 |
| same | Sinorhizobium americanum |
| sino | Sinorhizobium sp. CCBAU 05631 |
| eak | Sinorhizobium alkalisoli |
| emx | Sinorhizobium mexicanum |
| enu | Sinorhizobium numidicum |
| egi | Sinorhizobium garamanticum |
| skm | Sinorhizobium kummerowiae |
| steg | Sinorhizobium terangae |
| schp | Sinorhizobium chiapasense |
| ead | Ensifer adhaerens OV14 |
| eah | Ensifer adhaerens Casida A |
| ata | Agrobacterium tumefaciens S33 |
| agr | Agrobacterium tumefaciens H13-3 |
| atf | Agrobacterium tumefaciens Ach5 |
| arai | Agrobacterium radiobacter |
| agc | Agrobacterium sp. RAC06 |
| agt | Agrobacterium sp. 33MFTa1.1 |
| alf | Agrobacterium larrymoorei |
| avq | Agrobacterium vaccinii |
| avv | Agrobacterium vitis VAT03-9 |
| avf | Agrobacterium vitis VAR03-1 |
| asal | Agrobacterium salinitolerans |
| rir | Agrobacterium pusense IRBG74 |
| rpus | Agrobacterium pusense CFBP5875 |
| acuc | Agrobacterium cucumeris |
| aleg | Agrobacterium leguminum |
| agrc | Agrobacterium sp. CGMCC 11546 |
| agrz | Agrobacterium sp. 13-2099-1-2 |
| avi | Allorhizobium ampelinum |
| ret | Rhizobium etli CFN 42 |
| rec | Rhizobium etli CIAT 652 |
| rel | Rhizobium etli bv. mimosae Mim1 |
| rep | Rhizobium etli bv. phaseoli IE4803 |
| rei | Rhizobium etli bv. mimosae IE4771 |
| rlt | Rhizobium leguminosarum bv. trifolii WSM2304 |
| rlg | Rhizobium leguminosarum bv. trifolii WSM1325 |
| rlb | Rhizobium leguminosarum bv. trifolii WSM1689 |
| rlu | Rhizobium leguminosarum bv. trifolii CB782 |
| rhl | Rhizobium favelukesii |
| rga | Rhizobium gallicum bv. gallicum |
| rhr | Rhizobium sp. 11515TR |
| roy | Rhizobium oryzihabitans |
| rhid | Rhizobium hidalgonense |
| rban | Rhizobium bangladeshense |
| rrg | Rhizobium ruizarguesonis |
| rros | Rhizobium rosettiformans |
| raw | Rhizobium anhuiense bv. trifolii |
| rrho | Rhizobium rhododendri |
| rtu | Rhizobium tumorigenes |
| ara | Rhizobium rhizogenes K84 |
| aro | Rhizobium rhizogenes K599 |
| rbw | Rhizobium brockwellii |
| rif | Rhizobium indigoferae |
| rhib | Rhizobium sp. AB2/73 |
| rhia | Rhizobium sp. ACO-34A |
| rhiw | Rhizobium sp. WYJ-E13 |
| rbin | Rhizobium binxianense |
| ngl | Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141 |
| ngg | Neorhizobium galegae bv. orientalis HAMBI 540 |
| neo | Neorhizobium sp. SOG26 |
| nen | Neorhizobium sp. NCHU2750 |
| npm | Neorhizobium petrolearium |
| rht | Pseudorhizobium banfieldiae |
| rfv | Pseudorhizobium flavum |
| szo | Shinella zoogloeoides |
| ssum | Shinella sumterensis |
| abaw | Georhizobium profundi |
| pdes | Peteryoungia desertarenae |
| hoe | Hoeflea sp. IMCC20628 |
| asit | Terrirhizobium terrae |
| bme | Brucella melitensis bv. 1 16M |
| bmel | Brucella melitensis bv. 1 16M |
| bmi | Brucella melitensis ATCC 23457 |
| bmz | Brucella melitensis M28 |
| bmg | Brucella melitensis M5-90 |
| bmw | Brucella melitensis NI |
| bmee | Brucella melitensis bv. 3 Ether |
| bmf | Brucella abortus 2308 |
| bmb | Brucella abortus bv. 1 9-941 |
| baa | Brucella abortus A13334 |
| babo | Brucella abortus bv. 2 86/8/59 |
| babr | Brucella abortus bv. 6 870 |
| babt | Brucella abortus 63 75 |
| babb | Brucella abortus BDW |
| babu | Brucella abortus bv. 9 C68 |
| babs | Brucella abortus BER |
| babc | Brucella abortus NCTC 10505 |
| bsui | Brucella suis bv. 2 Bs143CITA |
| bsup | Brucella suis bv. 2 PT09143 |
| bsuv | Brucella suis bv. 2 PT09172 |
| bsuc | Brucella suis bv. 2 Bs364CITA |
| bmt | Brucella suis ATCC 23445 |
| bcs | Brucella canis ATCC 23365 |
| bsk | Brucella canis HSK A52141 |
| bol | Brucella canis Oliveri |
| bcar | Brucella canis RM6/66 |
| bcas | Brucella canis SVA13 |
| bpp | Brucella pinnipedialis B2/94 |
| bpv | Brucella pinnipedialis 6/566 |
| bcet | Brucella ceti TE10759-12 |
| bru | Brucella sp. 2002734562 |
| brj | Brucella sp. 09RB8471 |
| oan | Brucella anthropi ATCC 49188 |
| oah | Brucella anthropi OAB |
| ops | Brucella pseudogrignonensis |
| bpsn | Brucella pseudintermedia |
| bruc | Brucella sp. JSBI001 |
| ocr | Ochrobactrum sp. MT180101 |
| ocl | Ochrobactrum sp. EEELCW01 |
| occ | Ochrobactrum sp. BTU1 |
| och | Ochrobactrum quorumnocens |
| pscq | Pseudochrobactrum algeriensis |
| psxf | Pseudochrobactrum sp. XF203 |
| bja | Bradyrhizobium diazoefficiens USDA 110 |
| bju | Bradyrhizobium japonicum USDA 6 |
| bjp | Bradyrhizobium japonicum E109 |
| bra | Bradyrhizobium sp. ORS 278 |
| bbt | Bradyrhizobium sp. BTAi1 |
| brs | Bradyrhizobium cosmicum |
| aol | Bradyrhizobium oligotrophicum |
| brc | Bradyrhizobium sp. CCGE-LA001 |
| brad | Bradyrhizobium sp. BF49 |
| bic | Bradyrhizobium icense |
| bro | Bradyrhizobium sp. ORS 285 |
| brk | Bradyrhizobium sp. SK17 |
| bot | Bradyrhizobium ottawaense |
| brq | Bradyrhizobium amphicarpaeae |
| bgq | Bradyrhizobium guangdongense |
| bgz | Bradyrhizobium guangzhouense |
| bsym | Bradyrhizobium symbiodeficiens |
| bbet | Bradyrhizobium betae |
| barh | Bradyrhizobium arachidis |
| bvz | Bradyrhizobium vignae |
| bel | Bradyrhizobium elkanii |
| bdg | Bradyrhizobium daqingense |
| bsep | Bradyrhizobium septentrionale |
| bqb | Bradyrhizobium quebecense |
| bsei | Bradyrhizobium sediminis |
| bban | Bradyrhizobium barranii subsp. barranii |
| bcan | Bradyrhizobium canariense |
| baut | Bradyrhizobium brasilense 5G1B |
| bbra | Bradyrhizobium brasilense CB627 |
| bgk | Bradyrhizobium genosp. L |
| bcou | Bradyrhizobium commune |
| bpah | Bradyrhizobium pachyrhizi |
| bxn | Bradyrhizobium xenonodulans |
| bros | Bradyrhizobium roseum |
| braz | Bradyrhizobium sp. C-145 |
| boy | Bradyrhizobium ontarionense |
| bray | Bradyrhizobium sp. 62B |
| brai | Bradyrhizobium sp. I71 |
| braa | Bradyrhizobium sp. Ash2021 |
| blup | Bradyrhizobium lupini |
| bgea | Bradyrhizobium genosp. A |
| bgep | Bradyrhizobium genosp. P |
| bran | Bradyrhizobium sp. NDS-1 |
| brab | Bradyrhizobium sp. BWA-3-5 |
| rpa | Rhodopseudomonas palustris CGA009 |
| rpb | Rhodopseudomonas palustris HaA2 |
| rpc | Rhodopseudomonas palustris BisB18 |
| rpd | Rhodopseudomonas palustris BisB5 |
| rpe | Rhodopseudomonas palustris BisA53 |
| rpt | Rhodopseudomonas palustris TIE-1 |
| rpx | Rhodopseudomonas palustris DX-1 |
| rbk | Rhodopseudomonas boonkerdii |
| rhor | Rhodopseudomonas sp. P2A-2r |
| rhol | Rhodopseudomonas sp. BAL398 |
| rhoe | Rhodopseudomonas sp. P1 |
| nwi | Nitrobacter winogradskyi |
| nha | Nitrobacter hamburgensis |
| tarv | Tardiphaga sp. vice154 |
| bapa | Bartonella apihabitans |
| xdi | Xanthobacter dioxanivorans |
| sno | Ancylobacter novellus |
| apra | Ancylobacter pratisalsi |
| mea | Methylorubrum extorquens AM1 |
| mdi | Methylorubrum extorquens DM4 |
| mex | Methylorubrum extorquens PA1 |
| mch | Methylorubrum extorquens CM4 |
| mza | Methylorubrum zatmanii |
| metq | Methylorubrum sp. GM97 |
| mrd | Methylobacterium radiotolerans |
| met | Methylobacterium sp. 4-46 |
| mno | Methylobacterium nodulans |
| mor | Methylobacterium oryzae |
| meta | Methylobacterium sp. AMS5 |
| maqu | Methylobacterium aquaticum |
| mphy | Methylobacterium phyllosphaerae |
| mee | Methylobacterium currus |
| metd | Methylobacterium sp. DM1 |
| metx | Methylobacterium sp. XJLW |
| mets | Methylobacterium durans |
| meti | Methylobacterium radiodurans |
| mmes | Methylobacterium mesophilicum |
| mtea | Methylobacterium terrae |
| mind | Methylobacterium indicum |
| mog | Methylobacterium organophilum |
| mtad | Methylobacterium tardum |
| mecl | Methylobacterium sp. CLZ |
| mfuj | Methylobacterium fujisawaense |
| meni | Methylobacterium sp. NI91 |
| mens | Methylobacterium sp. NMS14P |
| miv | Microvirga sp. 17 mud 1-3 |
| mico | Microvirga thermotolerans |
| mld | Microvirga lotononidis |
| mehy | Methylovirgula sp. HY1 |
| medk | Methylocapsa sp. D3K7 |
| mpol | Methylocapsa polymorpha |
| bbar | Beijerinckiaceae bacterium RH AL1 |
| bbai | Beijerinckiaceae bacterium MG08 |
| rhj | Rhodoblastus sp. SSC7 |
| chel | Chelatococcus sp. CO-6 |
| cdq | Chelatococcus daeguensis |
| rva | Rhodomicrobium vannielii |
| rlac | Rhodomicrobium lacus |
| metg | Methyloligella sp. GL2 |
| phl | Pelagibacterium halotolerans |
| pem | Pelagibacterium flavum |
| pnf | Pelagibacterium nitratireducens |
| drp | Devosia rhodophyticola |
| dri | Devosia rhizosphaerae |
| dpv | Devosia polycyclovorans |
| yti | Paradevosia tibetensis |
| mhar | Mariluticola halotolerans |
| msc | Methylocystis sp. SC2 |
| mbry | Methylocystis bryophila |
| mhey | Methylocystis heyeri |
| mpar | Methylocystis parvus |
| miwa | Methylocystis iwaonis |
| mesz | Methylocystis sp. SB2 |
| meci | Methylocystis echinoides |
| memc | Methylocystis sp. MJC1 |
| mtw | Methylosinus trichosporium |
| mecq | Methylosinus sp. C49 |
| mspr | Methylosinus sporium |
| pleo | Pleomorphomonas sp. SM30 |
| mey | Martelella endophytica |
| mmed | Martelella mediterranea |
| mlut | Martelella lutilitoris |
| auz | Aureimonas sp. SA4125 |
| thd | Tokpelaia hoelldoblerii |
| psin | Pseudorhodoplanes sinuspersici |
| pphr | Pannonibacter phragmitetus |
| labp | Labrenzia sp. PHM005 |
| labt | Labrenzia sp. THAF35 |
| rpop | Roseibium porphyridii |
| ragg | Roseibium aggregatum |
| pstg | Phreatobacter stygius |
| paqt | Phreatobacter aquaticus |
| liz | Lichenihabitans sp. PAMC28606 |
| acut | Acuticoccus sp. I52.16.1 |
| mflg | Methyloraptor flagellatus |
| pzu | Phenylobacterium zucineum |
| bne | Brevundimonas naejangsanensis |
| bfq | Brevundimonas fontaquae |
| rfu | Roseobacter fucihabitans |
| dsh | Dinoroseobacter shibae |
| pga | Phaeobacter inhibens DSM 17395 |
| pgl | Phaeobacter inhibens 2.10 |
| pgd | Phaeobacter gallaeciensis DSM 26640 |
| php | Phaeobacter porticola |
| ppic | Phaeobacter piscinae |
| oar | Octadecabacter arcticus |
| oct | Octadecabacter sp. SW4 |
| lmd | Leisingera methylohalidivorans |
| lej | Leisingera sp. NJS204 |
| laqu | Leisingera aquaemixtae |
| lev | Leisingera sp. NJS201 |
| cmar | Celeribacter marinus |
| ceh | Celeribacter ethanolicus |
| cbak | Celeribacter baekdonensis |
| yan | Salipiger sp. CCB-MM3 |
| suam | Sulfitobacter alexandrii |
| suli | Sulfitobacter sp. JL08 |
| suld | Sulfitobacter sp. D7 |
| spot | Sulfitobacter pontiacus |
| smed | Sulfitobacter mediterraneus |
| sinl | Sulfitobacter indolifex |
| sfav | Sulfitobacter faviae |
| sdub | Sulfitobacter dubius |
| sulb | Sulfitobacter sp. CB2047 |
| suly | Sulfitobacter sp. TCYB15 |
| sulp | Sulfitobacter sp. PM12 |
| spse | Pseudosulfitobacter pseudonitzschiae |
| rok | Roseovarius sp. AK1035 |
| rom | Roseovarius faecimaris |
| roh | Roseovarius sp. THAF27 |
| rpel | Roseovarius pelagicus |
| rphc | Roseovarius phycicola |
| rrl | Roseovarius rhodophyticola |
| aht | Antarctobacter heliothermus |
| rot | Roseivivax sp. THAF197b |
| tgl | Thalassovita gelatinovora |
| lsal | Loktanella salsilacus |
| plcg | Palleronia sp. LCG004 |
| maru | Palleronia sp. THAF1 |
| asca | Aliisedimentitalea scapharcae |
| seoh | Seohaeicola sp. tig00000074 |
| matg | Marivita sp. tig00000067 |
| rpoh | Rhodophyticola porphyridii |
| rsp | Cereibacter sphaeroides 2.4.1 |
| rsh | Cereibacter sphaeroides ATCC 17029 |
| rsq | Cereibacter sphaeroides ATCC 17025 |
| rsk | Cereibacter sphaeroides KD131 |
| cazt | Cereibacter azotoformans |
| rbl | Pseudogemmobacter blasticus |
| pde | Paracoccus denitrificans |
| pami | Paracoccus aminophilus |
| pcon | Paracoccus contaminans |
| pzh | Paracoccus zhejiangensis |
| paro | Paracoccus tegillarcae |
| pamn | Paracoccus aminovorans |
| parr | Paracoccus sp. Arc7-R13 |
| pkd | Paracoccus kondratievae |
| ppan | Paracoccus pantotrophus |
| plia | Paracoccus liaowanqingii |
| psan | Paracoccus sanguinis |
| pmeh | Paracoccus methylovorus |
| psew | Paracoccus seriniphilus |
| psap | Paracoccus saliphilus |
| pfis | Paracoccus fistulariae |
| paex | Paracoccus aestuarii |
| pstl | Paracoccus stylophorae |
| palp | Paracoccus alcaliphilus |
| paez | Paracoccus aerodenitrificans |
| pdim | Paracoccus sediminicola |
| pfeo | Paracoccus ferrooxidans |
| phoi | Paracoccus homiensis |
| rmb | Tritonibacter mobilis |
| tsco | Tritonibacter scottomollicae |
| daa | Frigidibacter mobilis |
| don | Marivivens sp. JLT3646 |
| malc | Marivivens sp. LCG002 |
| rbz | Aestuarium zhoushanense |
| yrh | Yoonia rhodophyticola |
| geh | Paragemmobacter aquarius |
| sedi | Parasedimentitalea marina |
| ppso | Parasedimentitalea psychrophila |
| hml | Haematobacter massiliensis |
| pseb | Pseudorhodobacter turbinis |
| paed | Pseudohalocynthiibacter aestuariivivens |
| pshq | Pseudooceanicola spongiae |
| hdh | Pikeienuella piscinae |
| fap | Falsirhodobacter algicola |
| gce | Gymnodinialimonas ceratoperidinii |
| gyj | Gymnodinialimonas sp. 57CJ19 |
| nsm | Neotabrizicola shimadae |
| acro | Aliiroseovarius crassostreae |
| aalk | Abyssibius alkaniclasticus |
| lvr | Limimaricola variabilis |
| manh | Marinibacterium anthonyi |
| sinr | Sinirhodobacter sp. HNIBRBA609 |
| rcp | Rhodobacter capsulatus |
| rhp | Rhodobacter xanthinilyticus |
| cbot | Viadribacter manganicus |
| zmo | Zymomonas mobilis subsp. mobilis ZM4 |
| zmn | Zymomonas mobilis subsp. mobilis NCIMB 11163 |
| zmm | Zymomonas mobilis subsp. mobilis ATCC 10988 |
| zmi | Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023 |
| zmc | Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023 |
| zmr | Zymomonas mobilis subsp. mobilis NRRL B-12526 |
| ngf | Novosphingobium ginsenosidimutans |
| ssag | Sphingomonas sanguinis |
| sal | Sphingopyxis alaskensis |
| sphk | Sphingopyxis fribergensis |
| smag | Sphingopyxis macrogoltabida EY-1 |
| smaz | Sphingopyxis macrogoltabida 203 |
| ster | Sphingopyxis terrae subsp. terrae |
| sphq | Sphingopyxis sp. QXT-31 |
| sphx | Sphingopyxis sp. PAMC25046 |
| speg | Sphingopyxis sp. EG6 |
| spfd | Sphingopyxis sp. FD7 |
| spbs | Sphingopyxis sp. BSN-002 |
| spus | Sphingopyxis sp. USTB-05 |
| spog | Sphingopyxis sp. OPL5 |
| spyf | Sphingopyxis sp. YF1 |
| spjj | Sphingopyxis sp. J-6 |
| sphu | Uncultured Sphingopyxis sp. UC10 |
| swi | Rhizorhabdus wittichii RW1 |
| sphd | Rhizorhabdus wittichii DC-6 |
| spmi | Sphingobium sp. MI1205 |
| sphs | Sphingosinicella sp. BN140058 |
| goh | Gluconobacter oxydans H24 |
| goy | Gluconobacter oxydans DSM 3504 |
| gal | Gluconobacter albidus |
| gti | Gluconobacter thailandicus |
| gsp | Gluconobacter sphaericus |
| gfa | Gluconobacter frateurii |
| gbe | Granulibacter bethesdensis CGDNIH1 |
| gbh | Granulibacter bethesdensis CGDNIH2 |
| gbc | Granulibacter bethesdensis NIH3.1 |
| gbs | Granulibacter bethesdensis CGDNIH4 |
| asv | Acetobacter oryzifermentans |
| aot | Acetobacter orientalis |
| acek | Acetobacter vaccinii |
| nch | Neoasaia chiangmaiensis |
| lck | Lichenicola cladoniae |
| kha | Novacetimonas hansenii |
| amv | Acidiphilium multivorum |
| ros | Roseomonas sp. FDAARGOS_362 |
| rcv | Teichococcus cervicalis |
| azl | Azospirillum sp. B510 |
| ali | Azospirillum lipoferum |
| abs | Azospirillum baldaniorum Sp245 |
| abq | Azospirillum brasilense Az39 |
| abf | Azospirillum brasilense Sp 7 |
| ati | Azospirillum thiophilum |
| ahu | Azospirillum humicireducens |
| azt | Azospirillum sp. TSH58 |
| azz | Azospirillum thermophilum |
| aare | Azospirillum argentinense |
| azs | Azospirillum sp. TSH100 |
| azp | Azospirillum sp. TSA2s |
| nao | Nitrospirillum viridazoti |
| ncb | Niveispirillum cyanobacteriorum |
| rru | Rhodospirillum rubrum ATCC 11170 |
| rrf | Rhodospirillum rubrum F11 |
| rce | Rhodospirillum centenum |
| magx | Magnetospirillum sp. XM-1 |
| magn | Magnetospirillum sp. ME-1 |
| acru | Aerophototrophica crusticola |
| hjo | Haematospirillum jordaniae |
| htq | Hypericibacter terrae |
| hadh | Hypericibacter adhaerens |
| ecog | Paremcibacter congregatus |
| minw | Minwuia sp. contig_746 |
| dat | Desulforapulum autotrophicum |
| mai | Micavibrio aeruginosavorus ARL-13 |
| man | Micavibrio aeruginosavorus EPB |
| rpor | Rhabdochlamydia porcellionis |
| tbe | Treponema brennaborense |
| scd | Gracilinema caldarium |
| lac | Lactobacillus acidophilus NCFM |
| lad | Lactobacillus acidophilus La-14 |
| laf | Lactobacillus acidophilus FSI4 |
| laca | Ligilactobacillus acidipiscis |
| lani | Ligilactobacillus animalis |
| lfd | Ligilactobacillus faecis |
| lct | Companilactobacillus crustorum |
| lft | Companilactobacillus futsaii |
| cpab | Companilactobacillus pabuli |
| cchv | Clostridium chauvoei |
| csep | Clostridium septicum |
| dru | Desulforamulus ruminis |
| ahad | Anoxybacterium hadale |
| mmax | Megasphaera massiliensis |
| mana | Methylomusa anaerophila |
| ssph | Sporomusa sphaeroides |
| ssid | Sporomusa silvacetica |
| sacv | Sporomusa acidovorans |
| msa | Mycobacterium sp. JS623 |
| mfj | Mycobacterium florentinum |
| msto | Mycobacterium stomatepiae |
| msim | Mycobacterium simiae |
| mcb | Mycolicibacterium chubuense |
| mvq | Mycolicibacterium vaccae |
| mpsc | Mycolicibacterium psychrotolerans |
| maub | Mycolicibacterium aubagnense |
| mphu | Mycolicibacterium phocaicum |
| mmuc | Mycolicibacterium mucogenicum |
| mrf | Mycolicibacterium rufum |
| myq | Mycolicibacterium sp. TUM20985 |
| nbr | Nocardia brasiliensis |
| nod | Nocardia otitidiscaviarum |
| ntc | Nocardia tengchongensis |
| nya | Nocardia yamanashiensis |
| ngp | Nocardia gipuzkoensis |
| sco | Streptomyces coelicolor |
| shy | Streptomyces hygroscopicus subsp. jinggangensis 5008 |
| sho | Streptomyces hygroscopicus subsp. jinggangensis TL01 |
| sbh | Streptomyces bingchenggensis |
| sdv | Streptomyces davaonensis |
| sci | Streptomyces collinus |
| slv | Streptomyces lividans |
| strc | Streptomyces sp. CNQ-509 |
| srw | Streptomyces reticuli |
| spav | Streptomyces parvulus |
| strt | Streptomyces sp. SAT1 |
| sgs | Streptomyces griseochromogenes |
| salw | Streptomyces alboniger |
| sgm | Streptomyces aurantiacus |
| salu | Streptomyces noursei NK660 |
| splu | Streptomyces pluripotens |
| strd | Streptomyces sp. CCM_MD2014 |
| ssia | Streptomyces alfalfae |
| spun | Streptomyces fodineus |
| salf | Streptomyces alboflavus |
| sfk | Streptomyces formicae |
| svq | Streptomyces vinaceusdrappus |
| ska | Streptomyces kanamyceticus |
| svr | Streptomyces viridifaciens |
| sgf | Streptomyces griseofuscus |
| sby | Streptomyces buecherae |
| sfug | Streptomyces fungicidicus |
| scha | Streptomyces chartreusis |
| sspb | Streptomyces spectabilis |
| sbro | Streptomyces broussonetiae |
| shun | Streptomyces hundungensis |
| scyg | Streptomyces cyanogenus |
| sfeu | Streptomyces ferrugineus |
| slia | Streptomyces liangshanensis |
| smob | Streptomyces mobaraensis |
| shk | Streptomyces huasconensis |
| sdd | Streptomyces dangxiongensis |
| slf | Streptomyces liliifuscus |
| saov | Streptomyces aureoverticillatus |
| sspn | Streptomyces spinosirectus |
| scir | Streptomyces cinnabarinus |
| sarg | Streptomyces argyrophylli |
| sfp | Streptomyces flavofungini |
| sinn | Streptomyces incarnatus |
| strz | Streptomyces sp. 71268 |
| sarm | Streptomyces armeniacus |
| stpb | Streptomyces sp. PBH53 |
| strw | Streptomyces sp. WP-1 |
| sabd | Streptomyces albidocamelliae |
| strv | Streptomyces sp. VN1 |
| spof | Streptomyces poriferorum |
| stbr | Streptomyces sp. BRB040 |
| sgro | Streptomyces griseoincarnatus |
| styi | Streptomyces sp. YIM 121038 |
| stgo | Streptomyces sp. Go40/10 |
| sthu | Streptomyces sp. HU2014 |
| sct | Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 |
| scy | Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 |
| kis | Kitasatospora sp. NA04385 |
| knb | Kitasatospora hibisci |
| kic | Kitasatospora sp. CMC57 |
| kpur | Kitasatospora purpeofusca |
| strh | Streptacidiphilus sp. P02-A3a |
| arev | Actinacidiphila reveromycinica |
| leif | Leifsonia sp. PS1209 |
| lse | Leifsonia shinshuensis |
| mrg | Microbacterium rhizosphaerae |
| minv | Microbacterium invictum |
| malp | Microbacterium albipurpureum |
| gln | Glaciihabitans sp. INWT7 |
| noa | Actinomadura parvosata subsp. kistnae |
| blap | Blastococcus sp. PRF04-17 |
| sen | Saccharopolyspora erythraea |
| sacg | Saccharopolyspora sp. ASAGF58 |
| svi | Saccharomonospora viridis |
| sacc | Saccharomonospora xinjiangensis |
| amd | Amycolatopsis mediterranei U32 |
| amn | Amycolatopsis mediterranei S699 |
| amm | Amycolatopsis mediterranei S699 |
| amz | Amycolatopsis mediterranei RB |
| aoi | Amycolatopsis keratiniphila |
| aja | Amycolatopsis japonica |
| amq | Amycolatopsis methanolica |
| amyc | Amycolatopsis sp. AA4 |
| amyb | Amycolatopsis sp. BJA-103 |
| aab | Amycolatopsis albispora |
| amyy | Amycolatopsis sp. YIM 10 |
| aori | Amycolatopsis orientalis |
| aacd | Amycolatopsis acidiphila |
| aprt | Amycolatopsis sp. FBCC-B4732 |
| aroo | Amycolatopsis roodepoortensis |
| athm | Amycolatopsis thermalba |
| amog | Amycolatopsis mongoliensis |
| acyn | Amycolatopsis cynarae |
| acor | Amycolatopsis coloradensis |
| amyz | Amycolatopsis sp. CA-230715 |
| anw | Amycolatopsis nalaikhensis |
| amyd | Amycolatopsis sp. DSM 110486 |
| abar | Amycolatopsis bartoniae |
| amye | Amycolatopsis sp. EV170708-02-1 |
| amys | Amycolatopsis sp. TNS106 |
| pdx | Pseudonocardia dioxanivorans |
| psea | Pseudonocardia sp. AL041005-10 |
| psee | Pseudonocardia sp. EC080625-04 |
| pseh | Pseudonocardia sp. HH130629-09 |
| pseq | Pseudonocardia sp. EC080610-09 |
| pecq | Pseudonocardia sp. EC080619-01 |
| phh | Pseudonocardia sp. HH130630-07 |
| paut | Pseudonocardia autotrophica |
| psds | Pseudonocardia sp. DSM 110487 |
| apre | Actinosynnema pretiosum |
| sesp | Saccharothrix espanaensis |
| ssyi | Saccharothrix syringae |
| sacx | Saccharothrix sp. 6-C |
| kut | Kutzneria sp. CA-103260 |
| kbr | Kutzneria buriramensis |
| kphy | Kibdelosporangium phytohabitans |
| alo | Alloactinosynnema sp. L-07 |
| sace | Allosaccharopolyspora coralli |
| actu | Actinokineospora sp. UTMC 2448 |
| aaur | Actinokineospora auranticolor |
| cros | Crossiella sp. CA-258035 |
| ume | Umezawaea sp. Da 62-37 |
| actn | Actinoplanes sp. N902-109 |
| aih | Actinoplanes ianthinogenes |
| actr | Actinoplanes sp. NBRC 14428 |
| actl | Actinoplanes sp. L3-i22 |
| afs | Actinoplanes friuliensis |
| cati | Catellatospora sp. IY07-71 |
| dvc | Dactylosporangium vinaceum |
| dfu | Dactylosporangium fulvum |
| daur | Dactylosporangium aurantiacum |
| dmat | Dactylosporangium matsuzakiense |
| dact | Dactylosporangium sp. AC04546 |
| ccaz | Couchioplanes caeruleus |
| aey | Actinopolyspora erythraea |
| mhor | Methanosarcina horonobensis |
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