Paracidovorax avenae: Acav_0217
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Entry
Acav_0217 CDS
T01445
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aaa
Paracidovorax avenae
Pathway
aaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Acav_0217
09124 Replication and repair
03420 Nucleotide excision repair
Acav_0217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaa03021
]
Acav_0217
03036 Chromosome and associated proteins [BR:
aaa03036
]
Acav_0217
03400 DNA repair and recombination proteins [BR:
aaa03400
]
Acav_0217
Enzymes [BR:
aaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Acav_0217
Transcription machinery [BR:
aaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Acav_0217
Chromosome and associated proteins [BR:
aaa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Acav_0217
DNA repair and recombination proteins [BR:
aaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Acav_0217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ADX44143
UniProt:
F0Q212
LinkDB
All DBs
Position
236702..239050
Genome browser
AA seq
782 aa
AA seq
DB search
MEPAGPGTPGAEPAPPQGYTVAVRELCEFTAKQGDLDLRFTPAPTAREGMAGHAAVAARR
AAESPGYEAEVPLEGVCGLLRVRGRADGFDAVACRVDEVKTFKGRLDRQPAAHRALHWAQ
ARVYGWLLCASRGLPGLTVSLVYLDIGTQKETVLSEDWTAQALQAHFEALCGRFVGWAVQ
EVAHRAERDAALRSLSFPFAGGFRAGQRPLAEAVYRTAVAGRCLLAQAPTGIGKTVGTLF
PLLKAAPGAGIDKVFFLAAKTSGRQVALDALARIAAPSPLPLRVLELVAREKSCEYPGSA
CHGDACPLARGFYDRLPAARADALHPPGGGAPAPLDQARVRDAALRHGVCPYYLGQELAR
WADVAVGDYHYYFDMGGLLHGLAQASQWRVALLVDEAHNLVERGRRMYSAELLPDSLFQA
RRSATAATVPAVKKALDRVRRCWVALDREQPGDYAVLEAFPGKLLAALQQCSLALGEHFA
EYPEQMDAALQTFHLEVLQLLRMAELLDAHSIVDVSRPAQGAAGSSVVCVRNLVPAPFLG
PRLQAAQSGTLFSATLQPMDYYADLLGLPQDHVRTDVASPFQAAQLQVHIARHISTRYAH
RAASAQPIADLMASQFAGRPGNYLAFFSSYDYLQQVAEVFAQRHPGVPHWCQSRRMQEAG
QRAFLERFTEDGQGIGFAVLGGAFAEGIDLPGRRLIGAFLSTLGLPQVNPVNEQVRERMD
RLFGTGYDYTYLYPGLQKVVQAAGRVIRTPEDEGVVHLIDDRFARAQVRRLLPAWWEVGP
AA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcaggccctggaacgcccggcgccgagcctgcgccgccgcagggttacacc
gtcgcggtgcgcgagctgtgcgagttcaccgccaagcagggcgacctcgacctgcgcttc
accccggcgcccacggcgcgggagggcatggcgggccatgccgcggtggcggcccgccgg
gcggccgagtccccgggttacgaggccgaggtgccgctggaaggcgtgtgcggcctgctg
cgcgtgcggggccgtgccgacggattcgacgccgtggcgtgccgcgtggacgaggtcaag
accttcaagggccggctcgaccgccagccggccgcccaccgcgcgctgcactgggcgcag
gccagggtgtacgggtggctgctgtgcgcctcgcgcgggctgccggggctcaccgtctcg
ctggtgtacctggacatcggcacccagaaggaaaccgtgctgtcggaagactggacggcg
caggcgctgcaggcgcatttcgaggcgctgtgcggacgcttcgtgggctgggccgtgcag
gaggtggcccaccgggcagagcgcgatgctgcgctgcgcagcctgtcctttccgttcgcg
gggggcttccgcgcaggacagcggcccctggccgaggccgtgtaccgcactgccgtcgcc
ggccgctgcctgctcgcgcaggcgcccacgggcatcggcaagacggtgggcacgctgttc
ccgctgctcaaggccgcgccgggcgcgggcatcgacaaggtgttcttcctcgcggccaag
acctcggggaggcaggtggccctggacgcgctcgcccgcatcgcggcgccttctccgctg
cccctgcgcgtgctggaactggtggcgcgcgagaagtcctgcgaatacccgggcagcgcc
tgccatggcgacgcctgcccgctcgcgcgcggcttctacgaccgattgccagccgcgcgg
gccgatgcgctgcatccgcccggcggcggggcgccggcgccgctggaccaggcccgcgtg
cgcgatgccgccctgcgccacggggtgtgcccctactacctgggccaggagctcgcgcgc
tgggccgacgtggcggtgggcgactaccactactacttcgacatgggcggcctgttgcac
ggcctggcgcaggccagccagtggcgcgtggccctgctggtggacgaggcgcacaacctg
gtggagcgcggccggcgcatgtacagcgcggaactcctgccggattcgctcttccaggcc
cgccgctcggccaccgctgccaccgtgccggccgtgaagaaggccctcgaccgcgtgcgg
cgctgctgggtggcgctggacagggagcagccgggcgactatgccgtgctggaggctttt
cccggcaagctgctcgcggcgctgcagcagtgctccctcgcgctgggcgagcactttgcc
gagtacccggagcagatggatgccgcgctgcagaccttccacctggaggtgctgcagctg
ctgcgcatggccgaactgctggacgcccattccatcgtggacgtgagccgccccgcgcag
ggcgccgccggcagttccgtggtctgcgtgcgcaacctcgtgcccgcgccgttcctgggg
ccgcgcctgcaggccgcgcagtcgggcaccctgttttccgcgacgctgcagcccatggac
tactacgccgacctgctcggcctgccgcaggaccatgtccgcaccgacgtggcctctccc
ttccaggcagcgcagctgcaggtgcatatcgcgcgccacatctccacgcgctacgcccat
cgcgctgcctcggcgcagcccatcgccgacctcatggcgagccagttcgcgggccggccc
ggcaactacctggcctttttcagcagctacgactacctgcagcaggtggcggaggtattc
gcgcagcgccatcccggcgtgccgcactggtgccagtcccgccgcatgcaggaggccggg
cagcgcgcgttcctggagcgcttcaccgaagacggacagggcatcggcttcgcggtgctg
ggcggtgctttcgccgagggcatcgacctgcccggccgccggctgatcggggccttcctc
tccaccctgggactgccgcaggtgaacccggtgaacgagcaggtgcgcgagcgcatggac
cggctcttcgggacgggctacgactacacctacctctacccgggcctgcagaaggtcgtg
caggccgcgggccgggtgatccgcacgcccgaggacgagggcgtggtgcacctcatcgac
gaccgcttcgcgcgtgcgcaggtgcggcggctgctgccagcgtggtgggaggtgggccct
gccgcctga
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