KEGG   Paracidovorax avenae: Acav_0446
Entry
Acav_0446         CDS       T01445                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aaa  Paracidovorax avenae
Brite
KEGG Orthology (KO) [BR:aaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaa03400]
    Acav_0446
Enzymes [BR:aaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Acav_0446
    5.6.2.6  RNA 3'-5' helicase
     Acav_0446
DNA repair and recombination proteins [BR:aaa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Acav_0446
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ADX44369
UniProt: F0Q4J8
LinkDB
Position
481375..484425
AA seq 1016 aa
MPSPSSRAPRPRPLAEVWLATRGWRPFPFQREVWRALAQGRSGLLHATTGAGKTYAVWLG
ALQAFGTAGKVRGKDEGGISADLADAGEAAAGSPADGKRCKAPPPEPLTVLWLTPMRALA
ADTLKALRTPLDELAATQPTLARWTSGARTGDTGSAERGAQSRRLPTVLVTTPESLSLLL
ARADARELLSTVRLVVADEWHELLGNKRGVQVQLALARLAGWNPRVCVWGMSATLGNLPE
ARDALLAPLGAEVAEEGVLVQGQVDKRLVVDTLLPDHPERFSWAGHLGLRMLPAVVRELE
STSTTLVFVNVRSQAELWYKAILDARPDWAGELAIHHGSLDRGVREWVEAGLKEGRLRAV
VCTSSLDLGVDFLPVERVLQIGSAKGIARLLQRAGRSGHAPGRPSRITLVPTHSLELVEA
AAARAAVQAGEVEMRASPRRPVDVLVQHLVTVALGGGFESEALYAEVRRTVAYRDLPRAV
WQWCLDFVHRGGPSLAAYPDYQRVAPDEEGVWRMPSARLARRHRSNIGTIVSDASMAVQV
LHGARLGTMEESFLSRLSPGDCFVFAGQVLEMVKIEDMTAYVRRAARGRPTVPRWAGSRM
PLSTVLADFVVQQLAQAAAGRYGSPELRCVRPLLDVQQRWSALPTPGTLLAETLRTREGW
HLFLYPFAGRHAHIGLASLFAWRAAQGEAGTFSIAVNDYGLELLSATERDWAALLPELLR
VHAAPVPERGSDAKPLRLPAGEALAIRNTANAARAEAEAEDSSGASVIETGSAPQDEARH
ALLHEVLASLNATEMARRRFREIARVAGLIFQSHPGERRSARQLQASSQLFFEVFRKYDA
GNMLLRQADEEVLSQELDVAQLLAALRRIQAQDLVVQPLARPSPFAFPLMVERFREKLTN
EDLADRIARMLAQLDTAADAGSAAAASPPAQDVVPPDPPARPQRRRAAAKKATGKEGGGE
DGAAPAARTAMQQAAEAVRRTLDFSLTSSEDAGNGAAGGGRSRRRERKPSRPLPRL
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgcccagtccctcttcccgcgccccgcgtccccgccctctggcggaggtctggctcgcg
acgcgcggctggcggccctttcccttccagcgcgaggtctggcgcgcgctcgcccagggc
cgcagcgggctgctgcacgcgaccacgggcgccggcaagacctacgcggtgtggctgggc
gcgctccaggccttcggtaccgcgggcaaggtgcggggcaaggacgaaggcggcatctcc
gccgacctggccgacgccggggaggccgctgcaggaagtcccgctgacggaaaacggtgc
aaggccccgccgccggagccgctgaccgtgctctggctcacgccaatgcgggccctcgct
gccgacacgctgaaggccctgcgcaccccgctcgacgaactcgcggcgacgcagcccacg
ctcgcgcgctggaccagcggggcccgcacgggcgacacgggcagtgccgaacgcggcgcg
cagtcgcgccggctgcccaccgtgctggtgaccacgccggagagcctttcgctgctgctg
gcgcgggcggacgcgcgcgagttgttgtccaccgtgcgcctggtggtggccgatgagtgg
cacgagctgctcggcaacaagcgtggcgtgcaggtgcagctggcgctggcgcggttggcc
ggctggaatcccagggtgtgtgtctggggcatgtcggccacgctcggcaacctgcccgag
gcacgggatgcgctgctggcgcccctgggtgcggaggtggcggaagagggcgtgctggtg
cagggccaggtggacaagcggctcgtcgtcgatacgctgctgcccgaccatccggagcgg
ttttcctgggccggtcacctggggctgcgcatgctgccggcggtggtgcgcgagctggaa
tccacgtcgaccacgctggtgttcgtcaacgtgcggtcgcaggcggagctttggtacaag
gccatcctcgacgcgcggcccgactgggcgggggaactggcgatccaccatggctcgctg
gaccgcggcgtgcgggagtgggtggaggcgggcctgaaggaaggacgcctgcgcgccgtg
gtgtgcaccagcagcctggacctgggcgtggacttcctgcccgtggagcgcgtgctgcag
atcggttcggccaagggcatagcgcggctgctgcagcgcgccgggcgctcgggccatgcg
ccggggcgaccctcgcgcatcacgctggtgcccacgcacagcctggaactggtggaggcc
gcggccgcgcgcgccgcggtgcaggccggcgaggtggagatgcgcgccagcccgcgccgg
ccggtggacgtgctggtgcagcacctcgtcaccgtcgcactgggcggcggcttcgaatcc
gaggcgctgtacgcggaagtgcgccgcaccgtggcctaccgcgacctgccgcgcgcggtc
tggcagtggtgcctggatttcgtgcaccgcggagggccctcgctcgcggcctacccggac
taccagcgcgtggcgccagacgaagagggcgtctggcgcatgccgagcgcacgcctggcg
cgccgccaccgttcgaacatcggcaccatcgtgagcgacgccagcatggccgtgcaggtg
ctgcacggcgcgcggctgggcacgatggaggagagttttctctcgcgcctgtcaccgggc
gattgcttcgtgttcgcggggcaggtgctggagatggtgaagatcgaggacatgacggcc
tacgtgcgccgcgccgcgcgcgggcggcccacggtgccgcgctgggccggatcgcgcatg
ccgctgtccaccgtgctcgcggatttcgtggtgcagcaactcgcgcaggcggccgcgggg
cgttatgggtcgcccgagttgcgctgcgtccgaccgctgctggacgtgcagcagcgctgg
tccgcgctgccgacgcccggaacgctgctcgccgaaaccctgcgcacccgggagggctgg
cacctgttcctttatccgttcgcgggccgccatgcgcacatcggcctggccagcctgttc
gcatggcgcgcggcccagggcgaggccggcacgttttccatcgccgtgaacgactacggg
ctggagttgctgtctgcgaccgagcgcgattgggccgcattgctgccggagttgctgcgg
gtgcatgccgcgcccgtgccggagcgcgggagcgatgccaaaccgctgcggctgccggcc
ggtgaagccctggccatccgcaataccgcgaacgcagcgcgtgccgaggccgaggccgag
gattcgtccggcgccagcgtgatcgaaaccggcagcgccccgcaggacgaggcccgccac
gcgctgctgcacgaggtgctggccagcctcaatgccaccgaaatggcccggcgccggttc
cgcgaaatcgcgcgggtggcggggctgatcttccagagccatcccggcgagcgccgcagc
gcgcggcagctgcaggcgtcgtcgcagctgttcttcgaggtgttccgcaagtatgacgcg
ggcaacatgctcctgcgccaggccgatgaggaagtgctgagccaggagctggacgtggcg
cagctgctggcggcgctgcgccgcattcaggcacaggacctggtggtgcagccgctggcg
cggcccagcccgttcgcctttccactcatggtggagcgcttccgggaaaagctcaccaac
gaggacctggccgatcgcatcgcgcgcatgctggcgcagctggacaccgccgccgacgcg
gggtccgctgctgcggccagcccgccagcgcaggatgtggtgcctccggacccgcccgcg
cggccgcagcgccggcgcgccgcggcgaaaaaggcgaccggcaaggaggggggcggcgag
gacggggcggcgcctgccgcccggaccgcgatgcagcaggccgccgaggcggtccgccgc
acgctggatttttcactcacttcctccgaggacgcgggcaacggcgcggcagggggcgga
cgcagccgtcgccgcgagcgcaagccgtcacggcccctgccgcggctgtga

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