KEGG   Paracidovorax avenae: Acav_0636
Entry
Acav_0636         CDS       T01445                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
aaa  Paracidovorax avenae
Pathway
aaa00230  Purine metabolism
aaa00240  Pyrimidine metabolism
aaa01100  Metabolic pathways
aaa01232  Nucleotide metabolism
Module
aaa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
aaa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:aaa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Acav_0636
   00240 Pyrimidine metabolism
    Acav_0636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaa03400]
    Acav_0636
Enzymes [BR:aaa01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Acav_0636
DNA repair and recombination proteins [BR:aaa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Acav_0636
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_lgN Intein_splicing RNR-II_ins_dom DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: ADX44559
UniProt: F0Q700
LinkDB
Position
680865..684545
AA seq 1226 aa
MQRDPIDSLAPDAAPRLPEQPISLDVLREKYLKPGEADAETLYRRVARALASVEAPEVRE
AIEARFLANLRAGAIGAGRIMSAAGTDIQATLINCFVQPVGDCIQGMDEGGYPGIYEALR
EAAETMRRGGGVGYDFSRIRPRGAEVKGTASMASGPCSYINVFDQSCATVESAGARRGAQ
MGVLRIDHPDVLDFITAKRTPGRWNNFNVSVGVPDAFVQAVLDDAPWELVHPARPGAALR
EEGARQRADGQWVYRTLPARELWDTIMRSAYDFAEPGILFLDRVNTDNNLAYCESIAATN
PCVTADTWVMTDTGPAQVADLVGRPFNAVVDGRAFPTLSAGFFATGHKPVLRLRTRQGYA
LRLTEDHPVRRVAKQTRYVREVEWIAAGALQPGDEIVLNDHRTLPGWKGEGTEAEGYLLG
LLIGDGTLKADKAVISVWLAQEEEGDALLVANGAPAPSSGAHGIVRAAEAAAATLPHRAD
FRGFQRAVARSGGACTERRMASGAVRALALRMGMHPGAKAITPAMERASSAFSVGLLRGL
FDTDGSVQGRQEKGVSVRLAQSDLELLQCAQRMLLRLGIASTLYPDRRTAGLRLLPDGRG
GRQPCATRAQHDLVVSGDNLRVFAERIGFEDADKAGRLATVLSSYRRALNREPFTATVQD
VLPDGHEDVYDVTVADCHAFDANGLYVHNCGEQPLPSYGCCDLGPIILPRFVRHPFGFAG
EPAFDFEAFAASVATQVRALDNVLDVTFWPLPQQRAESAAKRRIGVGFTGLGNTLAMLRL
RYDTDAGRAMAMRIAECMRDAAYAASVELAKEKGVFPKFDAAGYLSPGTFASRLPAALQE
AIRTHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFSWTYTRRKREADGSTSEYAVEDH
AWRLYRALGGDVDALPDYFVSALQMPAAGHIAMMEAVQPFIDTAISKTVNVPVDYPYEDF
KNLYLHAWRARLKGLATYRPNAILGAVLEAPAAAPETGAATAAAAHDASESAEGPAVQAS
AMPPAAPVDPMRAVIESRPKGALSAVAEKVEYWTQEGRKTLYLLVSFLPVPDGHGGTLDR
AIEFFMPVGQSGESQQWITSSMRLLSLAARGGFLERALSDMRKVAWDRGPVRLGTHTRAD
GARVPLWHDSEVAAIAYAIQNILAQRAAAPAGPMRQQELPLDAPAAPTGLPPAMAGRKCP
ECGAHAVIRKDGCDYCTQCGHLGSCG
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgcaacgcgatccgatcgactccctcgcgcccgatgcggcgccccgcctgcccgagcag
cccatcagcctcgacgtgctgcgcgaaaagtacctcaagcccggcgaggccgatgccgag
accctctaccggcgcgtcgcccgcgccctggcctcggtcgaggcgccggaggtgcgcgag
gcgatcgaggcgcgcttcctcgccaacctgcgggccggcgcgatcggggcagggcgcatc
atgagcgcggcgggcaccgacatccaggccacgctcatcaattgcttcgtgcagcccgtg
ggtgactgcatccagggcatggacgagggcggataccccggtatctacgaagcgctgcgc
gaagctgcagagaccatgcggcgcggcggcggcgtaggctacgacttctcgcgcatccgc
ccgcgcggcgccgaggtgaagggcacggcctcgatggcctcggggccctgcagctacatc
aacgtgttcgaccaatcctgcgccaccgtggaaagcgctggcgcacgccgcggcgcgcag
atgggcgtgctgcgcatcgaccacccggacgtgctggacttcatcaccgccaagcgcacg
ccgggccgctggaacaacttcaacgtctccgtcggcgtgccggatgccttcgtgcaggcc
gtgctggacgatgcgccgtgggaactggtgcaccccgcgcggcccggcgccgcgctgcgc
gaagagggcgcccgccagcgcgccgatggccaatgggtctaccgcacgctgcccgctcgg
gagctgtgggacacgatcatgcgctcggcctacgacttcgccgagccgggcatcctgttc
ctcgaccgcgtcaataccgacaacaacctggcctactgcgaaagcatcgcggccacgaat
ccctgcgtgacggcggacacctgggtgatgacggacaccggccccgcgcaggtggccgac
ctcgtcggcaggccgttcaatgccgtcgtggacgggcgcgccttccccacgctgagcgcc
ggcttctttgccacgggccacaagcccgtgctgcggctgcgcacccgccagggctacgcg
ctgcggctgacggaagaccacccggtgcggcgcgtggcgaagcagacccgctacgtgcgc
gaagtggagtggatcgccgcgggcgcgctgcagcccggcgacgaaatcgtgctgaacgac
caccgcaccctgccgggctggaagggcgagggcaccgaggccgagggctacctgctgggc
ctgctgatcggcgacggtaccctaaaggccgacaaggcggtgatctccgtctggctcgcg
caagaggaagagggcgatgcactgctcgtcgccaatggcgcgcccgcgccctccagcggc
gcgcacggcatcgtgagggccgccgaggccgccgcagcgacgctgccgcaccgcgctgac
ttccggggcttccagcgtgcggtcgcacgcagcggcggggcgtgcaccgagcggcgcatg
gccagtggcgccgtgcgcgcgctggcgttgcgcatgggtatgcatcccggcgcgaaagcc
attacccccgccatggagcgcgcatcgtccgcgttctcggtgggcctgctgcgcggcctc
ttcgataccgatggctcggtgcagggacgccaggagaagggcgtgagcgtgcgtctcgcg
cagagcgacctcgaattgctgcagtgtgcgcagcgcatgctgctgcgcctgggcatcgcc
tccaccctgtacccggaccggcgcacggccgggttgcgcctgctgcccgacgggcgcggc
gggcggcagccctgcgccacacgggcgcagcacgatctcgtcgtgagcggggacaacctg
cgcgttttcgccgaacgcatcggcttcgaagacgcggacaaggccgggcggttggcaacg
gtgctctccagttaccggcgtgcgttgaaccgtgaaccgttcaccgccaccgtgcaggac
gtgctgccggacgggcacgaggacgtctacgacgtcaccgtggccgactgccatgccttc
gacgccaacggcctctatgtgcacaactgcggcgaacagccgctgccctcctacggctgc
tgcgacctcggccccatcatcctgccgcgcttcgtgcgccacccgttcggcttcgccggc
gagccggccttcgatttcgaggcgttcgcggccagcgtcgccacgcaggtgcgcgcgctc
gacaacgtgctggacgtcaccttctggccgctgccgcagcagcgcgccgagtccgcggcc
aagcggcgcatcggcgtgggcttcacgggcctgggcaatacgctcgccatgctgcgcctg
cgctacgacaccgacgcgggccgcgccatggccatgcgcatcgccgaatgcatgcgcgac
gccgcctatgccgcctcggtggagctggcgaaggaaaaaggcgtgtttccgaagttcgac
gctgcgggttatctctcgcccggcaccttcgcgagccgcctgcccgccgcgctgcaggag
gccatccgcacccacggcatccgtaacagccatctgctctcgatcgcgcccacgggcacc
gtgagcctcgccttcgccgacaacgcctccaatggcatcgagccgccgttctcgtggacg
tacacgcgccgcaagcgcgaggccgacggcagcaccagcgaatacgcggtggaagaccac
gcctggcggctctaccgcgcgctgggcggcgacgtggacgcgctgcccgactacttcgtg
agcgcgctgcagatgcccgcggccggacacatcgcgatgatggaggccgtgcagcccttc
atcgacacggccatctccaagaccgtgaacgtgccggtggactacccctacgaggatttc
aagaacctctacctgcatgcctggcgcgcgcggctcaagggcctggccacttaccggccg
aatgccatcctcggggccgtgctggaagcaccggccgctgcgccggagactggcgccgcc
accgcagccgctgcgcacgacgcatcggagtctgcggaggggccggctgtccaggcgtct
gccatgcctcccgccgcgcccgtggacccgatgcgcgccgtgatcgaaagccgccccaag
ggcgcgctctcggccgtggccgagaaggtggagtactggacgcaggagggccgcaagacg
ctctacctgctcgtctccttcctccccgtgcccgatggccacggcggcacgctggaccgc
gcgatagagttcttcatgcccgtggggcagagcggcgagtcgcagcagtggatcacttcc
agcatgcgcctgctctcgctggctgcgcgcggcggcttcctggagcgcgcgctcagcgac
atgcgcaaggtcgcctgggaccgcggcccggtgcgcctgggcacccacacccgggccgat
ggcgcccgcgtgccgctctggcacgactccgaagtggccgccatcgcctacgccatccag
aacatcctggcccagcgcgccgccgcacccgccgggcccatgcgccagcaggagttgccg
ctcgacgctcctgccgcgcccaccggcctgccgcccgcgatggccggccgcaaatgcccc
gagtgcggcgcgcatgccgtcatccgcaaggacggatgcgattactgcacgcagtgcggg
cacctgggcagttgcggatag

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