Paracidovorax avenae: Acav_0798
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Entry
Acav_0798 CDS
T01445
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
aaa
Paracidovorax avenae
Pathway
aaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Acav_0798
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
aaa02022
]
Acav_0798
02035 Bacterial motility proteins [BR:
aaa02035
]
Acav_0798
Two-component system [BR:
aaa02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Acav_0798
Bacterial motility proteins [BR:
aaa02035
]
Pilus system
Twitching motility proteins
Acav_0798
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
HTH_28
PDE8A_N
HTH_23
AAA
VpsR
Sigma70_r4
CBP30
HTH_50
MSL2_3
Motif
Other DBs
NCBI-ProteinID:
ADX44721
UniProt:
F0Q8Q3
LinkDB
All DBs
Position
complement(877150..878631)
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AA seq
493 aa
AA seq
DB search
MNAPAATILVVDDEPDLRTLYELTLLREGYRVETAATVEEARRQLQTRRFDAVITDMRLP
DGFGMELLQEIRQQKRRERCVVMTAYGSAENAVEALRSGAFDYLTKPVDLKQFRSVVASA
VQGTGGVPPPRSARPGPPGAASLSGLDPLVGDSEAMRNVKQRIAKVARSMAPVLIRGESG
TGKELVARALHGCSQRADGPLVAVNCGAIPENLLEAEFFGARKGSYTGASQDRDGYFQAA
RGGTLFLDEIGDLPLSMQAKLLRAIQERSVRPLGSTQEDTVDVRIVSATHRDLAADVQAG
RFRQDLYYRLNVIEVVIPPLRERREDLPALCAALLDRIAAETGLPAPPLTGEALADIARH
PLTGNVRELENLLHRAVALSDGGELHIECPADAAAGTPHAPRHAAPASETSEAPAGTADP
LPAAHVPLPSDLQGWLDQQEREILVRALREHGFNRTATAARLGISLRQIRYRIDRLAIAT
PQDDDAPDDHAAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgccgccaccatcctggtcgtcgatgacgagcccgacctgcgcacgctc
tacgagctcacgctgctgcgcgagggctatcgcgtggaaacggcggcgaccgtcgaggag
gcgcgccggcagctccagacccggcggttcgacgccgtcatcaccgacatgcgcctgccg
gacggcttcggcatggagctgctgcaggagatccgccagcagaaacggcgcgagcgctgc
gtcgtgatgaccgcctacggctctgcggagaacgccgtcgaggcgctgcgctccggtgcg
ttcgactacctcaccaagccggtggacctcaagcagttccgctccgtggtcgcctcggcc
gtgcagggcacgggcggcgtgccgccgccccgctccgcgcggcccggcccgccgggggcc
gccagcctgtccggtctcgatccgctcgtgggcgactcggaggccatgcgcaacgtcaag
cagcgcatcgccaaggtcgcgcgcagcatggccccggtgctgatccggggcgaatcgggt
accggcaaggaactcgtcgcccgcgcactgcatggctgcagccagcgcgccgacggcccg
ctggtggccgtgaactgcggcgccatccccgagaacctgctggaggcggagttcttcggc
gcgcgcaagggctcctacaccggcgccagccaggaccgggacggctacttccaggccgcc
cgcggaggcacgctcttcctcgacgagatcggcgacctgcccctgtccatgcaggccaag
ctgctgcgcgccatccaggagcgcagcgtgcgcccgctggggtccacccaggaagacacc
gtggacgtgcggatcgtcagcgccacccatcgcgacctcgccgccgacgtgcaggcgggg
cgcttccggcaggacctctactaccgcctcaacgtgatcgaggtcgtgatcccgccgctg
cgcgagcgccgcgaggaccttcccgccctgtgcgccgcgctgctcgaccgcatcgccgcg
gagaccggcctgcccgcgcccccgctgaccggcgaggccctggcggacatcgcccggcac
ccgctcaccggcaacgtacgcgaactggaaaacctgctgcaccgcgccgtggcgctgagc
gacggcggcgaactgcacatcgaatgcccggcggatgccgctgccggcacgccgcacgcg
ccgcggcacgcagccccggcgtccgagacttccgaagcgcctgccggcaccgcggatccg
ctccccgcggcccacgtgccgctgcccagcgacctgcagggctggctcgaccagcaggag
cgcgagatcctggtgcgcgccctgcgcgagcacgggttcaatcgcacggccaccgccgcg
cgcctgggcatcagcctgcggcagatccgctaccgcatcgaccgcctggccatcgccacg
ccgcaggacgacgacgcgccggacgaccatgcagcctcctga
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