Paracidovorax avenae: Acav_0814
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Entry
Acav_0814 CDS
T01445
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aaa
Paracidovorax avenae
Pathway
aaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Acav_0814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaa03021
]
Acav_0814
Transcription machinery [BR:
aaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Acav_0814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ADX44737
UniProt:
F0Q8R9
LinkDB
All DBs
Position
complement(897431..897946)
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AA seq
171 aa
AA seq
DB search
MAAVETALQQHVSALYCEHHGWLLAWLRRKLGCGHQAADVAHDTFLRILGTPTVLPTLRE
PRAYLVTTARRLLIDEARRRVIEQAYLDALAVVAGTDGGPSTEQVVETIQALVRIEAALQ
DLSARAQQAFLLHYLEGLPHAEVAAALGVSTRMVQKYLVQALVCCHQAVDG
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtggaaacggcgctgcagcagcatgtcagtgcgctgtattgcgaacatcat
ggatggttgctggcgtggctgcgccgcaagctcggttgcggacaccaggcggccgatgtg
gcccatgacacgtttctgcgcatcctgggcacgcccacggtgctgccgacgctgcgcgag
ccccgcgcctacctggtcaccaccgccaggcgcctgctgatcgacgaggcgcggcgccgc
gtgatcgagcaggcctacctggacgcgctggccgtggtggctggcaccgatggcggacct
tcgaccgagcaggtggtggagacgatacaggcgctggtgcgcatcgaggccgcgttgcag
gacctgtcggccagggcgcagcaggcttttctgctgcattacctggaagggctgccgcat
gcggaggtggcggccgcgctgggcgtgtccacccgcatggtgcagaagtacctggtccag
gcgctggtgtgctgccaccaggcagtggacgggtga
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