Paracidovorax avenae: Acav_1856
Help
Entry
Acav_1856 CDS
T01445
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aaa
Paracidovorax avenae
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaa03016
]
Acav_1856
Enzymes [BR:
aaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Acav_1856
Transfer RNA biogenesis [BR:
aaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Acav_1856
Prokaryotic type
Acav_1856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADX45773
UniProt:
F0Q798
LinkDB
All DBs
Position
2060258..2061256
Genome browser
AA seq
332 aa
AA seq
DB search
MTARAPRIRVQRRPVHGVLLLDKPLGLSSNDALQKAKWLLRAEKAGHTGTLDPLASGVLP
LCFGAATKFSQLQLDAPKTYEAVALLGVTTTTGDAEGDVVDHREVDASQLTPARLAEVQR
QFTGPIRQVPPMHSALKKDGKALYEYARAGIAVERKARDVVIHALKLSLVEDQGGAPAVR
MVVTCSKGTYIRTLGEDVGAALGCGAHLVFLRRIDTGGLGVERCVTLAALEAMDEAARMA
CVQPVETLLAGHAAVTLDHDNTARFLSGVRRRGPWPDAPAVAVFGDEPRALLGVGRVAAG
ELIPERLLSPQEIAQILESTPRAERGTLEPTL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgcgctccccgcatccgggtgcagcggcgcccggtgcacggagtgctgctg
ctcgacaagcccctgggcctttccagcaacgacgcgttgcagaaggccaagtggctgctg
cgcgctgaaaaagccggccatacgggcacgctcgatccgctcgccagcggcgtgctgccg
ctgtgcttcggcgcggccaccaagttcagccagctgcagctcgacgcgcccaagacttac
gaggccgtggccttgctcggcgtgaccaccaccacaggcgatgcggaaggcgatgtggtg
gatcaccgcgaggtagatgcctcgcagctcacccctgcgcgcctggccgaggtgcagcgg
cagttcaccggccccatccgccaggtgccgccgatgcacagcgccctcaagaaggacggc
aaggctctctacgaatacgcccgcgcgggcatcgccgtcgagcgcaaggcgcgcgacgtg
gtcatccatgcgctcaagctgtcgctggtcgaggaccagggcggcgcgcccgccgtgcgc
atggtcgtgacctgcagcaagggcacctacatccgtacgctgggcgaggacgtcggcgcc
gcactgggttgcggcgcgcacctcgtcttcctgcgccgcatcgacacgggcgggctgggc
gtggagcgctgcgtcacgctcgccgcgctcgaggcgatggacgaggccgcgcggatggcc
tgtgtccagccggtggagacgctgctcgcagggcatgcggctgtcacgctggaccatgac
aatacggcgcgattcctctccggcgtgcgccgccgcgggccctggcccgatgcgcccgcc
gtggcggtgttcggcgacgaaccccgtgccctgctgggcgtcggccgcgtggcggccggc
gaactcatccccgagcgcctcctgagcccccaggagatcgcacagattctggaaagcacg
ccgcgggcagagcgcggcacattggaacccactctatga
DBGET
integrated database retrieval system
