Paracidovorax avenae: Acav_1877
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Entry
Acav_1877 CDS
T01445
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aaa
Paracidovorax avenae
Pathway
aaa03420
Nucleotide excision repair
aaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acav_1877
03430 Mismatch repair
Acav_1877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaa03400
]
Acav_1877
Enzymes [BR:
aaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acav_1877
DNA repair and recombination proteins [BR:
aaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acav_1877
MMR (mismatch excision repair)
Other MMR factors
Acav_1877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Herpes_ori_bp
APC_u13
Motif
Other DBs
NCBI-ProteinID:
ADX45794
UniProt:
F0Q7B9
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All DBs
Position
2082950..2084887
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AA seq
645 aa
AA seq
DB search
MSRRVDSPDTDADREIHACIAAMPPQPFVVRAGAGSGKTTSLIKALDWVVSEHGASMRAK
KQKVACITYTDLAANEMLADVNSNPLAHVSTIHSFYWAIAKTFQADIKIWLNNEIRRRIS
ELEEDSKNYSSRVRQATRDRNQADQDRYARNLEALGSVKTFNYGVGSDYAKGILGHEDIL
QFADFLLQNRPLFRRVVALNYPFVFIDESQDTFPSVVKSFREVEAQMRGKFCLGFFGDPM
QSIFMRGAGDIAREDHWRAITKPENFRCAKQILDVANAVRAHGDGMKQVRGLHEKIDGEL
KLVEGSARMFVLPNTLNRNEALARVREWSAAANNDEGWTTPDLAVKILVIVHRMAASRLG
FGGIYSALNDKTSDAMKQGMQDGTGWPVRPFLSFALPIVAAMSAGNEFAAMNLLREFSPR
LKPGTLTGRRVAGVLRELRTAVLRLVAMLDEAGTTVGDIAIHLRDSGLFDFDERYERVLG
FVQDISDVAQEAEAADTAPVEGRSLDAAMVKFLRCAAQELRPYERYVSEDSPFATQHGVK
GAEFDRVVVVMDEDESDYRTYNYERVFANADARAADRAQAQNGDENTWSRTLRLLYVCCT
RAKRGLVLTFFVADPATAVENVVSSGILPRSAVFTQDALAAQAIR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgagtcgatagcccggataccgatgcggatcgcgagatccacgcctgcatt
gcggcaatgcctccgcagcccttcgttgttcgtgcaggcgcaggttctggcaagaccacc
tctctcatcaaggcgctggactgggtggtgtctgagcacggcgccagcatgcgggcaaag
aagcagaaggtcgcctgtatcacctacacagacctcgctgcgaatgaaatgctggcggac
gtcaactccaatccgttggctcatgtttcgactatccatagcttctattgggccattgcc
aagacgtttcaggccgatatcaagatctggctgaataacgaaatccgcaggcggatttct
gaactggaagaagattctaaaaactacagttcgcgcgttcggcaggccacgcgagacagg
aaccaggcggatcaagatcgctatgcccgaaacttggaagccctgggcagcgtcaagacg
ttcaattacggcgtcggcagtgactatgcgaagggcatacttggccacgaagacatcctt
cagttcgctgatttcctactccagaatcgcccactgttccgacgtgtcgtagcgctgaat
tacccgtttgtgttcattgacgagagtcaggacacattcccgagcgtggtcaagtccttc
agggaagttgaggcccagatgcggggtaaattctgcctcggtttttttggtgacccgatg
cagtcgatcttcatgagaggcgctggggacatcgcgcgcgaagaccattggcgagccatt
acaaagccggagaacttccgctgcgccaagcagatcctggacgtcgccaatgccgtgcgc
gcgcatggcgacggcatgaagcaagtccgcgggctgcacgaaaagatcgatggtgagctc
aagctcgtggagggctcggccagaatgttcgtcttgccgaacacgttgaaccgaaatgag
gctctggcaagggtccgagaatggagtgcggcagcgaacaacgacgagggatggactacc
ccagatcttgcggtcaagatccttgttatcgtgcaccgaatggccgcaagccggctgggt
tttggcggcatctactcggctctgaacgacaagacgtcggatgccatgaagcaggggatg
caggacggtaccggctggcccgttcggcccttcctcagtttcgcgctgccaatagttgca
gcgatgagcgccggcaacgagttcgccgcgatgaatctgctccgggaattcagccctcgc
ctaaagcctggcacgctgaccggccggcgtgttgcgggcgttttgcgtgagctgcgcaca
gccgttttgagactagtcgctatgctggatgaggccggaaccactgttggggacatagcc
atccatctccgcgactcaggcctattcgattttgacgagcgttatgagcgggtgcttggt
ttcgtccaggacattagtgacgttgctcaagaagcagaagccgccgatacagcccctgtc
gagggacggtccttggacgcggcgatggtcaagttcttacggtgcgcagcacaagagctt
cgcccatacgaacgatacgtctctgaagactcaccctttgctacgcagcatggcgtgaag
ggcgctgagttcgaccgcgttgttgtggtgatggacgaggacgagagcgactatcgaacg
tacaactacgagcgggtctttgccaacgctgatgcccgtgctgcagatcgtgcacaagcc
cagaatggtgatgaaaacacttggagccgaacgctgcggttgttgtatgtctgttgtact
cgcgccaagcgaggactggtgctgactttttttgttgccgacccggcgaccgccgtagaa
aacgttgtgtcgagcgggattctgccgaggagcgcggtcttcacgcaggatgcgctggct
gcccaagccattcggtag
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