Paracidovorax avenae: Acav_3236
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Entry
Acav_3236 CDS
T01445
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aaa
Paracidovorax avenae
Pathway
aaa03030
DNA replication
aaa03410
Base excision repair
aaa03420
Nucleotide excision repair
aaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Acav_3236
03410 Base excision repair
Acav_3236
03420 Nucleotide excision repair
Acav_3236
03440 Homologous recombination
Acav_3236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaa03032
]
Acav_3236
03400 DNA repair and recombination proteins [BR:
aaa03400
]
Acav_3236
Enzymes [BR:
aaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Acav_3236
DNA replication proteins [BR:
aaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Acav_3236
DNA repair and recombination proteins [BR:
aaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Acav_3236
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acav_3236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ADX47138
UniProt:
F0Q8E0
LinkDB
All DBs
Position
complement(3683295..3686078)
Genome browser
AA seq
927 aa
AA seq
DB search
MSKPKTLVLVDGSSYLYRAFHAMPDLRAVPGDPASPATGAIRGMINMLQALRRDYPADYA
ACVFDASGPTFRDTLYPEYKAHRAPMPDDLRAQIEPIHQVVRLMGWPVVCVPGVEADDVI
GTLAACAARQGIEVIVSSGDKDLSQLVDEHITIIDTMSGKRRDVAGVTAEFGVPPTLMVD
YQTLVGDAVDNVPGVPKVGPKTAAKWLNEYGSLDGLLARAGEIKGVAGENLRGALEWLPK
GRELVTIRTDCDLAGHVDGLPDLAGVAMGASDNAALRDFYQAYGFKGLARALQDDLPANA
TATLPGASGDLFASPETTFVAEAAQGREVAYDTVLTWEDFDRWLERIQGAELVALDTETT
SLDELRAEIVGLSFSVEPGAAAYIPLAHSGPDAPEQLPLDAVLERLKPWLEDGSRAKLGQ
HVKYDRHVFANHDIGVRGYVHDTMLQSYVLEVHKPHNLASLAERHTGRTGISYEDLCGKG
AKQIPFAQVPVEQAAAYSCEDSDQTLDVHRVLWPLIEADEKLRAIYALEMESSEVLFRIE
RNGVLIDPATLQQQSHDLGQRILKLEQEAYDIAGQPFNLGSPKQLGEIFFDKLGLPVVKK
TATGARSTDEEVLEKLAEDYPLPAKILEHRSLSKLKGTYTDKLSQLADPRTGRVHTHYAQ
AVAVTGRLSSNEPNLQNIPIRTSEGRRVREAFVAPPGRVIASADYSQIELRIMAHLSGDD
ALLRAFTEGLDVHRATAAEVFGVAVDQVSSEQRRYAKVINFGLIYGMSSFGLARNLGIDN
KAAAAYIDRYFQRYPGVKQYMDETKASAKARGYVETVFGRRLYLPEINSPNGPRRGAAER
AAINAPMQGTAADLIKKAMVAVQAVLDADKPQVLMIMQVHDELVFELPEEEAGWLRTEIP
RLMAGVAELKVPLLAEVGTGPNWEKAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccaagaccctggtgctggtggacggctccagctacctctaccgcgccttc
cacgccatgccggacctgcgcgccgtgcccggcgacccggccagccctgccacgggggcc
atccgcggcatgatcaacatgctgcaggcgctgcgcagggactatcccgccgactatgcc
gcctgcgtcttcgatgcgagcgggccgaccttccgcgacacgctctaccccgaatacaag
gcgcaccgcgcgcccatgcccgacgacctccgcgcgcagatcgagcccatccaccaggtc
gtgcgcctgatgggctggccggtggtctgcgtgcccggcgtggaggccgacgacgtgatc
ggcaccctcgcggcctgcgcggcgcgccagggcatcgaggtcatcgtctccagcggcgac
aaggacctgtcgcagctggtggacgagcacatcaccatcatcgacaccatgagcggcaag
cgccgcgacgtggcgggcgtcacggccgagttcggtgttccgcccacgctcatggtcgat
taccagacgctggtgggcgacgcggtggacaacgtgcccggcgtgcccaaggtgggcccc
aagacggccgccaagtggctgaacgaatacggctcgctcgacgggctgctggcacgggcg
ggcgagatcaagggtgtggccggcgagaacctgcgcggtgcgctggaatggctgcccaag
gggcgggagctggtcaccatccgcaccgactgcgacctcgcgggccacgtggatggattg
cccgacctggccggggtggccatgggagcgtccgacaacgcggcgctgcgcgatttctac
caggcctacggattcaaggggctggcgcgcgcgctgcaggacgacctgccggcgaacgcc
acggccacgctgcccggcgcgagcggcgacctgttcgcgagccccgaaaccaccttcgtg
gccgaggccgcgcaggggcgcgaggtggcctacgacaccgtgctcacctgggaggatttc
gaccgctggctggagcgcatccagggcgcggaactggtcgcgctcgacaccgaaaccacg
tcgctcgacgaactgcgcgccgagatcgtgggcctgagcttcagcgtggagcccggagcc
gccgcgtacattccgctggcgcattccggccccgacgcgcccgagcagttgccgctggac
gcggtgctggagcgcctcaagccctggctggaggacggctcgcgggcgaagctcggccag
cacgtcaagtacgaccgccacgtgttcgccaaccacgacatcggcgtgcggggctacgtg
cacgacaccatgctgcagagctacgtgctggaggtgcacaagccgcacaacctcgcgagc
ctggcggaacgccacacgggccgcaccggcatcagctatgaggacctctgcggcaagggc
gccaagcagatccccttcgcccaggtgccggtcgagcaggccgccgcctattcgtgcgag
gattccgaccagacgctggatgtgcaccgcgtgctctggccgctgatcgaggccgacgag
aaattgcgcgccatctacgccctcgaaatggagagcagcgaggtgctgttccgcatcgag
cgcaatggcgtgctgatcgacccggccacgctgcagcagcagagccacgacctcgggcag
cgcatcctcaagctcgagcaggaagcctacgacatcgccggccagcctttcaacctcggc
agccccaagcagcttggcgagatcttcttcgacaagctcggcctgccggtggtgaagaag
accgcgaccggcgcgcgcagcaccgacgaagaagtgctggaaaagctcgccgaggattac
ccgctgcccgccaagatcctggagcaccgcagcctctccaagctcaagggcacctacacc
gacaagctgagccaactggccgatccgcgcacgggccgcgtgcacacgcactacgcgcag
gccgtggcggtgacggggcgcctgtcgagcaacgagcccaacctgcagaacatccccatc
cgcacgtccgagggccggcgcgtgcgcgaggccttcgtggccccgccgggccgcgtgatc
gccagcgccgactacagccagatcgagctgcgcatcatggcccacctgagcggcgacgac
gcgctgctgcgcgccttcaccgaggggctggacgtgcaccgcgccaccgcggcagaggtg
ttcggcgtggcggtggaccaggtgagcagcgagcagcgccgctatgccaaggtgatcaac
ttcgggctgatctacggcatgagcagcttcggcctcgcacgcaacctgggcatcgacaac
aaggccgccgcggcctacatcgaccgctacttccagcgctaccccggcgtgaagcagtac
atggacgagaccaaggcctcggccaaggcgcgcggctacgtcgagaccgtgttcggccgg
cggctctacctgcccgagatcaattcgcccaacggcccgcggcgcggagcagccgagcgc
gccgccatcaacgcgcccatgcagggcacggcggccgacctcatcaagaaggcgatggtg
gccgtgcaggcggtgctggatgcggacaagccgcaggtgctgatgatcatgcaggtgcac
gacgaactggtcttcgagttgccggaggaggaggctggctggctgcgcacggagatcccg
cggctcatggcgggcgtggctgaactcaaggtgccgctgctggccgaggtgggcacgggg
ccgaactgggagaaggcgcactga
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