Paracidovorax avenae: Acav_3299
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Entry
Acav_3299 CDS
T01445
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aaa
Paracidovorax avenae
Pathway
aaa00040
Pentose and glucuronate interconversions
aaa01100
Metabolic pathways
aaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Acav_3299
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Acav_3299
Enzymes [BR:
aaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Acav_3299
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
ADX47201
UniProt:
F0Q971
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All DBs
Position
3751442..3753025
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AA seq
527 aa
AA seq
DB search
MHQHASLRRPRATPLTPALRALRLAAAATAATALVCACGGESVAAQAAAAPAGSIDSLGA
TGWASHGTPTTGGQGAAAGKTYTVANRNELIQALYGNTAVIAPDGSVQGTPDNAPKVIRI
RGTIDLNVDSQLRPYTPDRYVAGSCASSVHGYASQASLWSDYLAAYLPGVWGNARPVSGK
PEDARACAAELQRRVVTISVPDNTSLLGIGTDAKILHGNLMLGMPDAPVANIVIRNIAFE
DAFDDFPQWDPTDSSDGRWNSEYDLISVAHASHVWIDHNTFSDGDRHDHAFPSVWHETVH
GTDYSGSDFKVQHHDGLVDVTRHGNYVTLSNNHFHDHDKAFLIGGTDVPGADSGNPRMLR
VTFHGNHFQNLRQRQARVRYGMVHLYNNYYENTRDASADYPWLAGITLGQSGKVHAENNV
VSLASPDRPARPADVANARISAARTQDCAALFSASECASTFYDSGTVLNGAPADLTAAVR
WSSALVTDPAWKPSDFYDYALEDTADLAAHITARAGAGQLESPAARR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaacatgcctccctgcgacggccacgcgcgaccccgttgactcccgcgctccgt
gcgctgcgcctggcagccgctgccacggcggccacggcgctggtgtgcgcatgcggcggc
gagagcgtggcagcgcaggctgctgcagcgcccgcaggcagcatcgattcactgggcgcg
acgggctgggcctcccacggcacgccgaccaccggtgggcagggcgccgcggcagggaag
acctatacggtggcgaaccgcaatgaactcatccaggcgctctacgggaacaccgccgtg
atcgccccggacggttcggtgcaggggacgccggacaatgcgcccaaggtcatccgcatc
cggggcaccatcgacctgaacgtggacagccagctgcgcccttacacgccggaccgctac
gtggcgggctcctgcgcttcctcggtgcacggctatgcgtcccaggccagtctttggtcg
gactacctcgcggcctacctccccggcgtctggggcaatgcacggccggtgagcggcaag
ccggaagacgcgcgggcctgcgcggcagaactgcaaaggcgcgtcgtgacgatcagcgtg
ccggacaacacatccctgctgggcatcggcacggacgcgaagatcctgcacggcaacctc
atgttggggatgccggatgcgcccgtcgccaacatcgtgatccgcaacatcgccttcgag
gacgcgttcgacgatttcccccaatgggacccgaccgactcctccgacggccggtggaac
tcggagtacgacctcatttccgtggcccatgccagccatgtgtggatcgaccacaacacc
ttcagcgacggcgaccgccacgaccatgccttcccctccgtgtggcacgagacggtgcac
ggcacggactacagcggcagcgatttcaaggtgcagcaccatgacggcctcgtggacgtg
acccggcacggcaactacgtcaccctgtcgaacaaccatttccacgaccacgacaaggcg
ttcctgatcggcggcaccgatgttcccggcgcggacagcggcaatccgcgcatgctgagg
gtgacattccacggcaaccatttccagaacctgcggcagcgccaggcccgtgtccgctac
gggatggtgcatctctacaacaactactacgagaacacacgggacgcctcggccgactat
ccctggctggccggcatcacgctgggccagagcggcaaggtgcatgccgagaacaacgtg
gtgtcgctcgccagcccggaccggcccgcgcggcctgccgatgtggcgaacgcccggatc
tcggcagcacggacgcaggactgcgcggcgctgttttccgccagcgagtgcgcctccacg
ttctacgacagcggcacggtgctcaatggcgctcccgcggacctgacggccgccgtgcgc
tggtcctcggccctggtgactgaccccgcatggaagccgtcggacttttacgactacgcg
ctggaagacaccgcggacctggcggcgcacattaccgcccgtgcgggagcgggccagctc
gaaagccccgcagcgcggcgctga
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