Paracidovorax avenae: Acav_3788
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Entry
Acav_3788 CDS
T01445
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aaa
Paracidovorax avenae
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaa03021
]
Acav_3788
Transcription machinery [BR:
aaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Acav_3788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2390
HTH_3
GRIM-19
Motif
Other DBs
NCBI-ProteinID:
ADX47679
UniProt:
F0Q1N7
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All DBs
Position
4321477..4322418
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AA seq
313 aa
AA seq
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MTIQSGTAATALAPANAWALIPPLGNLDAYISAVNRLPMLTAEEERTYARRLKEHNDVEA
AGRMVMSHLRLVVSIARQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQNVRLVSYAMHWI
KAEIHEYILKNWRMVKVATTKSQRKLFFNLRSMKQGFKADSAAGNTGTHRETLSEQEIDV
VAQQLNVKREEVIEMETRLSGGDVMLDPAPSDDGEQAYGPIAYLADGTHEPTAMIESRQR
DVLATDGIANALATLDDRSRRIVEERWLKVNDDGSGGMTLHELAAVYGVSAERIRQIEVA
AMKKMKKALAEYA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacgattcagtctggaaccgccgccaccgcgctcgcaccggccaatgcctgggccctg
atccccccgctgggcaatctggatgcctacatctccgccgtgaaccgtctgccgatgctg
acggccgaggaggaacgcacctatgcccgccggctgaaggagcacaacgacgtggaagcc
gcgggccggatggtgatgtcgcacctgcggctggtggtgtcgatcgcccggcagtacctg
ggctacggcctgccgcacggcgacctgatccaggaaggcaacgtgggcctgatgaaggcc
gtgaaacgcttcgatccggaccagaacgtgcggctggtgagctacgcgatgcactggatc
aaggccgagatccacgagtacatcctgaagaactggcgcatggtgaaggtggccaccacc
aagagccagcgcaagctgttcttcaacctgcgctcgatgaagcagggcttcaaggccgat
tccgccgccgggaacacgggtacccaccgcgagacgctctccgagcaggaaatcgacgtc
gtggcccagcagctcaacgtcaagcgcgaagaagtcatcgagatggaaacgcgcctgtcg
ggaggcgacgtgatgctggacccggccccgtcggacgatggtgaacaggcctacggcccc
atcgcctacctggccgacggcacgcatgagccgaccgccatgatcgaatcgcgccagcgc
gacgtgctggccacggacggcatcgcgaatgcgctggccacgctggacgaccgcagccgc
cgcatcgtcgaggagcgctggctcaaggtcaacgacgacggctcgggtggcatgacgctg
catgaacttgcggcggtgtacggcgtgagcgcggagcgcatccggcagatcgaagtggcc
gcgatgaagaagatgaagaaggcgctggcggaatacgcctga
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