Paracidovorax avenae: Acav_4135
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Entry
Acav_4135 CDS
T01445
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
aaa
Paracidovorax avenae
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaa03009
]
Acav_4135
Enzymes [BR:
aaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Acav_4135
Ribosome biogenesis [BR:
aaa03009
]
Prokaryotic type
rRNA helicases
Acav_4135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
WSD
YlmH_RBD
CMS1
BON
Motif
Other DBs
NCBI-ProteinID:
ADX48024
UniProt:
F0Q568
LinkDB
All DBs
Position
complement(4718604..4720040)
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AA seq
478 aa
AA seq
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MQPSPSSPAPQAAAAASAGFDALGLAPEVLANLRQLGYERMTPIQAASLPPALLGRDLIA
QASTGSGKTAAFGLALLERLNPRRFAVQALVLCPTRELADQVASEIRRLARAQENIKVVT
LCGGVPLRGQVASLEHGAHVVVGTPGRVMDHLERGTLDLGALATFVLDEADRMLDMGFSE
DIAQVARRCPDTRQTLLFSATYPDGIERIARQFMKDPQRIAVQAQHAEGKIEQRWYEVQE
RERLHAVSQLLNHFRPESAIAFCNTKQQCRDLVEVLRAQGFSALALHGDLEQRDRDQVLV
QFANRSCSVLVATDVAARGIDIAGLQAVINVDVAPDPEVHIHRIGRTGRADAEGLALSLA
SLPEMGQVGRIEVLQGRPSEWHPLSGLTPAPGGPLQPPMATIQIIGGRKEKIRAGDVLGA
LTGEMGFTREQVGKINVNDFSTYVAVERSVARQAAQRLSSGRVKGRSVKARLVEDGDA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccctccccttcctccccggcgccccaggccgccgccgcggcatccgcaggcttc
gacgccctcgggctcgcccccgaggtgctggccaacctgcgccagctcggctacgagcgc
atgacgcccatccaggcggccagcctgccgcccgccctgctgggccgcgacctgatcgcc
caggccagcaccggcagcggcaagacggccgccttcgggctggccctgctggagcgcctc
aatccgcgccgcttcgccgtgcaggcgctggtgctctgccccacgcgcgaactggccgac
caggtggcgtccgagatccgccggctggcccgcgcgcaggagaacatcaaggtcgtcacc
ctctgcggcggcgtgccgctgcgcgggcaggtcgcgagcctggagcatggcgcgcacgtc
gtcgtcggcacgcccggccgcgtgatggaccacctcgagcgcggcacgctcgacctcggc
gcgctggccaccttcgtgctggacgaggccgaccgcatgctcgacatgggtttctccgaa
gacatcgcccaggtggcgcgccgctgcccggacacccgccagacgctgctgttctcggcc
acctatcccgacggcatcgagcggatcgcgcggcagttcatgaaagacccgcagcgcatc
gccgtgcaggcccagcacgccgagggcaagatcgagcagcgctggtacgaggtgcaggag
cgcgagcgcctgcatgccgtctcgcagctgctgaaccatttccggccggaatccgccatc
gcgttctgcaacacgaagcagcagtgccgcgacctggtggaggtgctgcgcgcccagggg
ttcagcgccctggccctgcacggcgacctggagcagcgcgaccgcgaccaggtgctggtg
cagttcgccaaccgcagctgcagcgtgctggtggccaccgacgtggccgcgcgcggcatc
gacatcgccgggctgcaggccgtcatcaacgtggacgtggcacccgacccggaggtgcac
atccaccgcatcgggcgcaccggccgcgctgatgcggaaggcctggccctcagcctcgcg
agcctgccggaaatgggccaggtggggcgcatcgaggtgctgcagggccggccgtcggag
tggcatccgctctccggcctcacccccgcgccgggcgggccgctgcagccgcccatggcc
acgatccagatcatcggcggccgcaaggaaaagatccgcgcgggcgacgtgctgggcgcg
ctcaccggcgagatgggcttcacgcgcgagcaggtgggcaagatcaacgtgaacgacttc
tccacctacgtggcggtggagcgcagcgtggcgcggcaggccgcgcagcggctctcgtcc
ggccgcgtgaagggccgcagcgtcaaggcgcggctggtcgaggacggcgacgcctga
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