Amycolatopsis albispora: A4R43_11620
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Entry
A4R43_11620 CDS
T05547
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
aab
Amycolatopsis albispora
Pathway
aab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
A4R43_11620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aab03400
]
A4R43_11620
DNA repair and recombination proteins [BR:
aab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
A4R43_11620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AXB43118
UniProt:
A0A344L4Z4
LinkDB
All DBs
Position
complement(2504587..2505450)
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AA seq
287 aa
AA seq
DB search
MRAMWKGSVSFGLVTIPIHLYAATENKNVSLRQVHEEDGGRIQYKRFCTIDGKEVPYSEI
AKGYELDDGEMVVITDSDLAELPLSTSKSIDVVEFVPLESIDPIYFDRTYYLEPQKSMAK
PYVLLRDALHKSGHVAIAKVAVRQRESLALLRVIGDVLVMTTMLWPDEVRAADFPFLNEE
PPQIRDQELAMAGSLIDSLSEPVFEQDKYRDHYREALEALIEAKAAGKETTTVAAPAEEG
EVVDLMAALQASVSEAKKSRKADTETTATTASTEKPKRKTTAKKKSA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgatgtggaagggctcggtgtccttcgggctggtcaccatcccgatccacctg
tacgcggccacggagaacaagaacgtctccctgcggcaggtgcacgaggaggacggcggc
cgcatccagtacaagcggttctgcacgatcgacggcaaagaggtgccctacagcgagatc
gccaaggggtacgagctggacgacggcgagatggtggtgatcaccgacagcgacctcgcc
gagctgccgctgtccacttcgaagtccatcgacgtggtggagttcgtgccgctggagtcg
atcgacccgatctacttcgaccgcacctactacctcgaaccgcagaagtcgatggcgaag
ccgtacgtgctgctgcgcgacgcgctgcacaagtccggtcacgtggcgatcgccaaggtg
gcggtccgccagcgcgagtcgctggcgctgctgcgggtgatcggtgacgtgctggtgatg
accaccatgctgtggccggacgaggtgcgggccgccgacttcccgttcctgaacgaggag
ccgccgcagatccgcgaccaggagctggccatggccggttcgctgatcgactcgctgtcc
gagccggtgttcgagcaggacaagtaccgcgaccactaccgcgaggcgctcgaagcactg
atcgaggcgaaggccgcgggcaaggagaccaccacggtcgcggcacccgccgaggagggc
gaggtcgtcgacctgatggccgcgctgcaggccagcgtcagcgaggcgaagaagagccgg
aaggccgacacggaaaccacggcgaccacggcgagcaccgagaagccgaagcgcaagacc
acggcgaagaagaagagcgcctga
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