Amycolatopsis albispora: A4R43_13870
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Entry
A4R43_13870 CDS
T05547
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aab
Amycolatopsis albispora
Brite
KEGG Orthology (KO) [BR:
aab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aab03016
]
A4R43_13870
Enzymes [BR:
aab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A4R43_13870
Transfer RNA biogenesis [BR:
aab03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A4R43_13870
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXB43497
UniProt:
A0A344L623
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All DBs
Position
3003648..3004904
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AA seq
418 aa
AA seq
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MDTADQDGATPGSPDSPAPIPLREPAEGTPGVIADPEALAHACARIAEGTGAIAVDTERA
SGYRYWPKAYLVQLRREGVGSFLVDPIPLSGQLGPLADVLNGAEWVLHAASQDLPCLAEL
DLRPTALFDTELAGRLAGYDRVALGTLVERLLGYQLEKGHSAADWSRRPLPVDWLNYAAL
DVELLIPLREKLEAELEAQGKLDWARQEFEAVRTAPPPPPRAEPWRRVSGIHKIRSPRGL
AAVREFWQIRDEMARKRDRAPSRVLPDSAIVSAVLADPKTTAELQALPVFSGRVQRKFAS
TWLRPLQVARALPKSELPLPAQPTDGPPPPNRWADKDPDAAARLSAARAALTALAEHHRL
PVENLLLPELVRRTCWRPPENRDEAGVAEVLRAGGARPWQLELTVPALVKALAATAEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtggataccgctgatcaggacggcgcgacgcccggttcgccggactcgccggcgccgatt
ccgctgagggaaccggccgaagggacccccggggtcatcgcggacccggaggcgctggca
cacgcctgcgcccggatcgccgaaggcaccggcgcgatcgcggtggacaccgagcgggcc
tccggttaccgctactggcccaaggcctacctggtgcagttgcgccgggagggcgtgggc
tccttcctcgtcgaccccatcccgctgagcgggcagctggggccgctcgccgacgtgctc
aacggcgccgaatgggtgctgcacgcggcttcccaggacctgccctgcctcgccgagctt
gacctgcgcccgaccgccctgttcgacaccgagctggccgggcggctggccgggtacgac
cgggtcgcgctcggcacgctggtcgagcggctgctcggctaccagctggagaaggggcac
agcgcggccgactggtcccgccgcccgctgccggtcgactggctgaactacgccgcgctg
gacgtcgaactgctgatcccgctgcgcgagaagctcgaagccgaactcgaagcacagggc
aagctcgactgggcgcggcaggagttcgaggcggtccgcaccgctcccccgcccccaccg
agggccgaaccgtggcgccgggtctccggcatccacaagatccgctccccgcgtggcctg
gccgcggtcagggagttctggcagatccgcgacgagatggcgcgcaagcgcgaccgggca
cccagccgggtgctgccggacagcgcgatcgtcagcgcggtgctcgccgatccgaagacc
accgccgaactgcaggcgctgccggtgttcagcgggcgcgtccagcgcaagttcgcctcg
acctggctgcggccgctgcaggtggcgcgtgcgctgcccaagtcggagctgccgctgccc
gcccagcccaccgacggcccgccgccgccgaaccgctgggccgacaaggacccggacgcc
gcggcccggctgtccgcggcgcgggccgcgctcaccgcgctggccgagcaccaccggctg
ccggtggagaacctgctgctgcccgagctggtccgccgcacctgctggcggccgccggag
aaccgcgacgaggccggggtggccgaggtgctgcgtgcgggcggggcccgtccgtggcag
ctcgagctgaccgtgcccgcgctggtgaaggcgctggcggccacggccgagaactag
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