Amycolatopsis albispora: A4R43_18755
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Entry
A4R43_18755 CDS
T05547
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aab
Amycolatopsis albispora
Pathway
aab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4R43_18755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aab03400
]
A4R43_18755
Enzymes [BR:
aab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A4R43_18755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A4R43_18755
DNA repair and recombination proteins [BR:
aab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4R43_18755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AXB44309
UniProt:
A0A344L8D5
LinkDB
All DBs
Position
complement(4066780..4067646)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEVVRAGLEKHVSGRTIAEVSVLHPRAIRRHVAGEADFSGRLAGERVLAARRRG
KYLWLELSGQDAVLAHLGMSGQMLMQPEDAPDEKHLRIRVRFDDDGPELRFVDQRTFGGL
ALSELVEADGTLLPSTIAHIARDPMDPAFDPVAAVKALRSRRTEVKRALLDQTLVSGVGN
IYADEALWRSRLHWARPTDKLTTKQGAALLQAATDVMGEALLAGGTSFDALYVNVNGQSG
YFERSLDAYGQEGRACRRCGTPIRRDPFMNRSSFSCPRCQPKPRLTRA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcctgaggtcgaggtcgtccgggcgggcctcgagaagcacgtttccggg
cgcaccatcgccgaggtgagcgtgctgcacccgcgggcgatccggcggcacgtggcgggt
gaggcggacttctccggcaggctcgcgggggagcgggtgctcgcggctcgccgtcgtggc
aagtacctctggctggagctgtccgggcaggacgccgtgctggcgcacctcggcatgagc
ggccagatgctgatgcagcctgaggacgcgccggacgagaagcacctgcggatccgcgtg
cggttcgacgacgacgggccggaactgcggttcgtcgaccagcgcacgttcggcgggctg
gcgctgtccgaactggtcgaagccgacggcacgctgctgccgagcaccatcgcgcacatc
gcgcgtgacccgatggacccggcgttcgacccggtggccgcggtcaaggcgctgcgctcg
cggcgcaccgaggtcaagcgcgcgctgctggaccagacgctggtctccggtgtcggcaac
atctacgccgacgaggcgctgtggcgctcacgcctgcactgggcgcggccaacggacaag
ctcaccaccaagcagggcgcggccctgctccaggccgccaccgacgtgatgggtgaagcc
ctgctggccggcggcacctcgttcgacgcgctgtacgtcaacgtcaacggccagtccggc
tacttcgagcgctcgctggacgcctacgggcaggagggccgggcctgccgccgctgcggc
accccgatccggcgggacccgttcatgaaccgctcgtcgttctcctgcccgcgctgccag
cccaagccgcggttgaccagggcctga
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