Amycolatopsis albispora: A4R43_27325
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Entry
A4R43_27325 CDS
T05547
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aab
Amycolatopsis albispora
Brite
KEGG Orthology (KO) [BR:
aab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aab03016
]
A4R43_27325
Enzymes [BR:
aab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
A4R43_27325
Transfer RNA biogenesis [BR:
aab03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
A4R43_27325
Prokaryotic type
tRNA splicing ligases
A4R43_27325
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AXB45741
UniProt:
A0A344LCG7
LinkDB
All DBs
Position
complement(5856093..5857283)
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AA seq
396 aa
AA seq
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MYTAVEGARVPIRMWADPHSVEEQAMRQLHNVANLPWVHGVAVMPDVHYGKGATVGSVIA
MRDAVSPAAVGVDIGCGMSAVRTSLTAADLPDDLGKLRRRIESAVPVGFGMHRTPVNTAR
VHGVGGWAEFWNRFGELHAGVQDLRERAHRQVGSLGGGNHFIEVCLEQGGPDEGRVWLML
HSGSRNIGKELAERHMSVARKLPHNADLPDRDLAVFVAGTPEMQAYRRDLFWAQDYAARN
RATMVALVKQAVKDELPQVAFDDAISCHHNYVSEETYDGVDLLVTRKGAIRAGSGDLGII
PGSMGTGSYIVRGLGNEASFESASHGAGRRMSRNKAKKLYTAADLAAQTDGVECRKDSGV
VDEIPAAYKDIDSVIAAQSDLVEVVAHLKQVICVKG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgcggtggagggtgctcgcgtgccgatccggatgtgggcggacccgcattcg
gtggaggagcaggcgatgcgtcagctccacaatgtcgccaacctcccgtgggtgcacggg
gtggccgtgatgccggacgtgcactacgggaagggcgccaccgtcgggagcgtgatcgcc
atgcgcgacgcggtctccccggcggctgtcggcgtggacatcgggtgcgggatgagcgcg
gtgcgcacctcgctcaccgccgccgacctgcccgacgacctcggcaagctgcggcgccgc
atcgaatccgcggtgccggtcggcttcggcatgcaccgcacgccggtgaacaccgcgcgg
gtgcacggggtcggcggctgggcggagttctggaaccggttcggtgagctgcacgcgggt
gtgcaggacctgcgtgaacgcgcgcaccggcaggtggggagcctcggtggtgggaaccac
ttcatcgaggtttgcctcgagcagggcggtcccgacgaggggcgggtgtggctgatgctg
cactcgggttcgcggaacatcggcaaggagctggcggagcggcacatgagcgtggcgcgg
aagctgccgcacaacgcggatctgccggaccgcgacctggcggtgtttgtggcgggcacg
ccggaaatgcaggcgtaccggcgggatttgttctgggcgcaggattacgccgcccgcaac
cgggcgacgatggtcgcgctggtgaagcaggcggtcaaggacgaactcccgcaggttgct
ttcgacgacgccatttcctgccatcacaattatgtttcggaggaaacgtacgacggtgtg
gatttgctggtgacgcgaaagggcgcgatccgggcgggttcgggggatctcgggatcatt
ccgggcagcatgggtaccggctcgtacatcgtgcgcgggctgggcaacgaggcttccttc
gagtccgcctcccacggcgccgggcgtcgcatgtcgcggaacaaggcgaagaagctgtac
accgccgcggacctcgccgcccagaccgacggcgtcgaatgccggaaggactcgggcgtg
gtggacgaaatcccggccgcctacaaggacatcgactcggtgatcgcggcgcagtcggac
ctggtcgaggtggtcgcgcacctgaagcaggtcatctgcgtgaagggctga
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