Amycolatopsis albispora: A4R43_33655
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Entry
A4R43_33655 CDS
T05547
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aab
Amycolatopsis albispora
Pathway
aab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4R43_33655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aab03021
]
A4R43_33655
03400 DNA repair and recombination proteins [BR:
aab03400
]
A4R43_33655
Enzymes [BR:
aab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4R43_33655
Transcription machinery [BR:
aab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4R43_33655
DNA repair and recombination proteins [BR:
aab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4R43_33655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AXB46781
UniProt:
A0A344LFF7
LinkDB
All DBs
Position
7180607..7184518
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITGVNTELRHNDLPTLENEIGVERKNLELKRDADIEARAQKLEAD
LAELEAEGAKSDVRRKVKEGGEREMRQIRDRAGRELDRLEEVWTTFTKLEPRQLIADELL
YRELIDRYGEYFTGGMGAEAIQKLAAEFDVAAEAESLRDTIRNGKGQKKLRALKRLKVVA
AFQVTGNDPRGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKDMALELFKPFVMKRLVDLNHAQNIKSAKRMVERSR
PQVWDVLEEVITGHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSANNILSPASGRPLAMPRLDMVTGLFHLTRLTEDAEGAGQ
AFSSPAEAIMAFDRKAISLHAPIKIRIKDRQPAKADEARLAEKGWEPGKPWLAETTLGRV
LFNELLPADYPFVNEPMPKKRQAAIVNDLAERYSMTQVAQTLDRLKDAGFYWATRSGVTV
AISDVLVPEEKKGILEEYEGKADQVEKRYQRGQLSHAERNNELVKVWTQATEDVAKVMEA
HFPDDNPISMIVKSGAAGNMTQVRSLAGMRGLVSNPKGEYIPRPIKANFREGLSVAEYFI
ATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTTRGINMIIGEDIGGGKVL
RDQHVETSVYARTLAADAADASGNVVLNAGDDLGDPAIEKLISSGISKVKVRSVLTCESA
VGICATCYGRSMATGQLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITTGLPR
VQELFEARVPKGKAPIADVDGRVRIEESERFWKITLIPDDGSEEIVFDKLSKRQRLANTP
DGPLADGDHVKVGQQLLEGTPDPHEVLRVMGPREAQMHLVDEVQKVYRAQGVSIHDKHIE
VIVRQMLRRVTIIDSGATDFLPGELPERTKFEATNRAAVAEGGEPASGRPVLMGITKASL
TTDSWLSAASFQETTRVLTDAAINGRSDKLVGLKENVIIGKLIPAGTGINKYRNIQVQPT
EEARVAAYAIPSYDDGYYTPDVFGTGTGAAVPLDDYDFGRDFR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaatttcttcgatgagctccggatcggcctcgccaccgctgacgacatc
cgccagtggtccttcggtgaagtgaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgcgactgggagtgc
tactgcggtaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggcgtgccctcgcggctgggttacctgctcgacctg
gccccgaaggacctcgagaagatcatctacttcgcggcctacgtgatcaccggcgtgaac
accgagctgcggcacaacgacctgccgacgctcgagaacgagatcggggtcgagcgcaag
aacctcgagctcaagcgcgacgccgacatcgaggcccgtgcgcagaagctggaagccgac
ctggccgagctggaggcggagggcgccaagtccgacgtccgccgcaaggtcaaggagggc
ggcgagcgcgagatgcgccagatccgcgaccgcgccggtcgtgagctggaccgtcttgag
gaggtctggaccaccttcaccaagctcgagccgcgtcagctgatcgcggacgagctgctc
taccgcgagctgatcgaccgctacggcgagtacttcaccggcggcatgggcgcggaggcc
atccagaagctggccgccgagttcgacgtggccgccgaggcggagagcctgcgcgacacc
atccgcaacggcaaggggcagaagaagctccgcgccctcaagcggctcaaggtggtggcg
gccttccaggtcaccggcaacgacccgcgcggcatggtgctcgacgccgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccggttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccggctcaagcggctgatcgatctc
ggcgcgcccgaaatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgtccggtgaccggtcccggcaaccgcccgctgaag
tcgctgtccgacctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccggtcggtgatcatcgtcgggccgcagctgaagctgcaccag
tgcggtctgccgaaggacatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtggagcgctcgcgg
ccgcaggtgtgggacgtgctcgaagaggtcatcaccggccacccggtgatgctgaaccgc
gcgccgaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgcggacttcgacggtgaccag
atggcggtgcacctgccgctgtcggcggaggcgcaggccgaggcccgcatcctgatgctg
tcggcgaacaacatcctctccccggcgtcgggtcgcccgctggcgatgccgcgtctggac
atggtgaccgggctgttccacctgacccgcctcaccgaggacgccgagggcgccgggcag
gccttctcctcgccggccgaggccatcatggccttcgaccgcaaggcgatcagcctgcac
gcgccgatcaagatccggatcaaggaccgccagccggccaaggccgacgaggcgcgcctg
gccgaaaagggctgggagcccggcaagccgtggctggccgagaccaccctgggccgcgtg
ctgttcaacgagctgctgccggcggactacccgttcgtgaacgagccgatgccgaagaag
cggcaggccgcgatcgtgaacgacctcgccgagcggtactcgatgacccaggtcgcgcag
acgctggaccgcctcaaggacgccggtttctactgggccacccggtccggggtcaccgtc
gccatctccgacgtgctggtgcccgaggagaagaagggcattctcgaggagtacgagggc
aaggccgaccaggtcgagaagcgctaccagcgcggtcagctctcgcacgccgagcgcaac
aacgagctggtgaaggtgtggacccaggcgaccgaggacgtcgccaaggtgatggaggcc
cacttccccgacgacaacccgatctcgatgatcgtgaagtccggggcggcgggcaacatg
acccaggtccggtcgctggccgggatgcgtggtctggtgtcgaacccgaagggtgagtac
atcccgcgcccgatcaaggcgaacttccgcgagggcctgtcggtggcggagtacttcatc
gccacgcacggtgcccgcaagggcctggccgacaccgcgctgcgtaccgccgactcgggt
tacctgacccgtcgtctggtggacgtttcgcaggacgtcatcgtgcgcgaggtcgactgc
ggcaccacccgcggcatcaacatgatcatcggtgaggacatcggtggcggcaaggtgctg
cgcgaccagcacgtggagaccagcgtctacgccaggaccctggccgccgacgcggccgac
gccagcggcaacgtggtgctcaacgccggtgacgacctcggcgacccggccatcgagaag
ctgatctccagcggcatctcgaaggtcaaggtccgcagcgtgctgacctgcgagtcggcc
gtcggcatctgcgccacctgctacggccgctcgatggcgaccggtcaactggtggacgtc
ggcgaggcggtgggcatcgtggccgcccagtcgatcggtgagccgggtacgcagctgacc
atgcgtaccttccaccagggtggcgtcgccggtgacgacatcaccaccggtctgccgcgt
gtgcaggagctgttcgaggcccgcgtgccgaagggcaaggcgccgatcgccgacgtcgac
ggccgcgtgcggatcgaggagagcgagcggttctggaagatcaccctgatcccggacgac
gggtcggaggagatcgtgttcgacaagctgtccaagcggcagcggctggcgaacaccccg
gacggcccgctggccgacggcgaccacgtcaaggtcgggcagcagctgctcgagggcacg
ccggacccgcacgaggtgctccgcgtgatgggtccccgcgaggcgcagatgcacctggtg
gacgaggtccagaaggtgtaccgggcgcagggtgtgtcgatccacgacaagcacatcgag
gtcatcgtgcggcagatgctgcgccgcgtgacgatcatcgactccggtgccacggacttc
ctgccgggcgagctgcccgagcggaccaagttcgaggcgacgaaccgggccgcggttgcc
gagggcggcgagcccgcttcgggccgcccggtgctgatggggatcacgaaggcctcgctg
accacggactcgtggctgtcggcggcgtcgttccaggagaccacgcgggtgctgaccgac
gcggccatcaacggccgttcggacaagctcgtcggcctcaaggagaacgtgatcatcggt
aagctgatcccggccggtaccggcatcaacaagtaccggaacatccaggtgcagccgacc
gaggaggcacgggtcgccgcctacgcgatcccgtcctacgacgacggctactacaccccg
gacgtcttcggcaccggcaccggtgccgccgtcccgctggacgactacgacttcggtcgc
gacttccggtaa
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