Amycolatopsis albispora: A4R43_35960
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Entry
A4R43_35960 CDS
T05547
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aab
Amycolatopsis albispora
Pathway
aab03420
Nucleotide excision repair
aab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4R43_35960
03430 Mismatch repair
A4R43_35960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aab03400
]
A4R43_35960
Enzymes [BR:
aab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4R43_35960
DNA repair and recombination proteins [BR:
aab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4R43_35960
MMR (mismatch excision repair)
Other MMR factors
A4R43_35960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Replic_Relax
NYN
Motif
Other DBs
NCBI-ProteinID:
AXB47181
UniProt:
A0A344LGK7
LinkDB
All DBs
Position
7670369..7673641
Genome browser
AA seq
1090 aa
AA seq
DB search
MTAVEHRLVTPADVAEALGLHPPTPEQAAVIAAPTEPSLVVAGAGAGKTETMAARVVWLV
ANGFVTPEQVLGLTFTRKAARQLGERVRARLRRLAGSGLLDRVDPSGGRRAAVMAGEPTV
LTYHAYAGRLLAEHGLRLPVRPGARLLSETASWQLAHRVVAHWDPDLDTDKVPPTITAHV
LGLAGELGEHLVSTEKLAEYTAWLCELIENAPKAKGQRDGLPVKLQEIVAAQRFRLALLP
LVQAYHDRKLAEGALDFADQMSLAAGLVTDHEEVVIGERERYRAVLLDEYQDTGHAQRVL
LRGLFGMGERPSMPVTAVGDPAQAIYGWRGASAANLPRFTTDFPWATEDGLRPADEYGLL
TSFRNPPEVLVLANAIVEPLRAKGLGVKQLRARVGAHPADVSVALLPDIRVEREWVAERL
AERWFTAIEATGEPPTAAVLVRRRADMAPIAAELRARGLPVEVVGLGGLLEEPEVADLVS
TLRVLADPLAGTAAARLLTGARWRLGAADVKALWSRAVELSADPEEPRDTEPTLVPERSE
HTGLVDAIDDPGDPERYSREGFRRIQRLGAELAALRRRLDQSLPELVSDVERTMLLDVEA
LARPNAAGRAHLDAFADVVTEFAETSPTATLMSFLDYLATAEHAEDGLSPGEVEVVPDRV
QVLTVHAAKGLEWQYVAVPHLVSDVFPSRRRSSSWLRTVTALPAKFRGDEQDLPKLRLSG
GENRKEVLEELELHEANFADREADEERRLCYVALTRSEHGLLVSGHWWNESSAKPKGPST
FLTEIREVIVEYGADDVGVLEQWADPPDNEDENPLTTSTRTAVWPVDPLGGRRSAVTEGV
ELVLDELAVLNRRDPDEPDPDEGHEDPDGWIADTEVLLAERAKAASRTEDIVLPDHLSVS
QLVELAADPESLAGKLRRPLPAPPNSFARRGTAFHAWLEQRFSGDRLLDFEDLPGAADDE
AVGDGELELLQRAFERSEWAGRTPHDVEVPFSAEVDGINLRGRMDAVFADDDGGWTVLDW
KTGGVPGPDRMPALSVQLAAYRLAWSVLAGVPLEKVRAAFHYVRDGRTVNPVDLLDFDGL
RELLRSVPEE
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcggtggagcaccggctggtcaccccggccgacgtcgccgaagcactcggcctg
cacccgccgacgcccgagcaggcggcggtgatcgcggcccccaccgagccgtcgctggtg
gtggccggcgcgggcgccggtaaaaccgagaccatggccgcgcgagtggtttggttggtg
gccaacggttttgtcaccccggagcaggtgctcggcctgaccttcacgcgcaaggcggca
cgtcagctcggtgagcgcgtgcgcgcgcggctgcggcggctggccggttccgggttgctg
gaccgggtcgatcccagcggcggccgccgggccgcggtgatggccggtgagccgaccgtg
ctcacctatcacgcgtacgccggtcgcctgctggccgagcacgggctgcggctgccggtc
cggccgggcgcgcggctgctgtcggagaccgcgtcgtggcagctcgcgcaccgcgtggtc
gcgcactgggaccccgacctcgacaccgacaaggtgccgccgacgatcaccgcgcacgtg
ctcggcctggccggggaactcggcgagcacctggtgtccaccgagaagctcgccgagtac
accgcgtggctgtgcgagctgatcgagaacgcgccgaaggccaaggggcagcgggacgga
ctgccggtcaagctgcaggagatcgtggccgcgcaacggttccggctcgcgctgctgccg
ctggtgcaggcctaccacgaccgcaagctggccgagggcgcgctcgacttcgccgaccag
atgtcgctggcggccgggctggtcaccgaccacgaggaggtggtgatcggcgagcgcgag
cgctaccgcgcggtactgctcgacgagtaccaggacaccgggcacgcgcaacgggtgctg
ctgcgcgggttgttcggcatgggcgagcgcccgtcgatgccggtgaccgcggtcggtgac
cccgcgcaggccatctacggctggcgcggggcgagcgcggcgaacctgccgcggttcacc
acggacttcccgtgggccaccgaagacgggctgcggcccgccgacgaatacggcctgctg
accagcttccgcaacccgcccgaggtgctggtgctggccaacgcgatcgtggaaccgttg
cgcgccaaggggctcggtgtcaagcagctgcgcgcgcgggttggcgcgcacccggcggac
gtgtcggtggcgctgctgccggacatccgcgtcgaacgcgagtgggtggccgaacgcttg
gcggagcggtggttcaccgccatcgaggccaccggggagccgccgacggccgcggtgctg
gtgcgccgccgggccgacatggcgccgatcgccgccgagctgcgggcgcgcggcctgccg
gtggaagtggtcggcctcggcgggctgctggaggaacccgaggtcgccgacctggtcagc
acgctgcgggtgctggccgatccgctggcgggcacggcggccgcgcggttgctcaccggg
gcgcggtggcggctgggcgcggcggacgtgaaggcgttgtggagccgggcggtcgagctg
tccgcggaccccgaagaaccacgggacaccgagccgacgctggttcccgaacgctcggag
cacaccggcctggtcgacgcgatcgacgaccccggtgacccggaaaggtattcgcgcgag
ggcttccgccgcatccagcggctcggcgcggaactggccgcgctgcgccgcaggctggac
cagtcgctgccggagctggtgtccgatgtggagcggaccatgctgctcgacgtggaggcg
ctggcccggccgaacgccgccggccgggcgcacctggacgccttcgccgacgtggtcacc
gaattcgccgagacctcgccgaccgccacgctgatgtcctttttggactacctggccacc
gccgagcacgccgaggacgggctgagccccggtgaggtcgaggtggtgccggaccgcgtg
caggtgctcaccgtgcacgcggcgaaggggctggagtggcagtacgtggccgttccgcac
ctggtcagcgacgtgttcccgagccggcggcggtcgtcgtcctggctgcgcacggtcacc
gcactgccggcgaagttccgcggtgacgagcaggacctgccgaaactgcggttgtccggc
ggcgagaaccgcaaggaagtgctcgaagaactcgaactgcacgaggcgaacttcgccgat
cgtgaggccgacgaggagcggcggctctgctacgtggcgctgacccggtccgagcacggg
ctgctggtttccgggcactggtggaacgaaagcagcgcgaagccgaaggggccgtcgacc
tttctcaccgagatccgtgaagtgatcgtcgagtacggcgccgacgacgtcggcgtgctc
gagcagtgggccgacccgccggacaacgaggacgagaacccgctgaccacctcgacgcgc
accgcggtgtggccggtggatcccttgggcgggcggcgatccgccgtcaccgagggcgtg
gagctggtgctcgacgagctggccgtgctgaaccgccgcgacccggacgagccggatccg
gacgagggccacgaggacccggacggctggatcgccgacaccgaggtgctgctcgccgag
cgcgcgaaggcggcgagccggaccgaggacatcgtgctgcccgaccacctgtcggtgagc
cagctggtcgaactggccgccgacccggagtcgctggcgggcaagctccggcgcccgctg
cccgcgcccccgaacagcttcgcccgccgcgggaccgcgttccacgcctggctggagcag
cggttcagcggcgaccggctgctcgacttcgaggacctgcccggcgcggccgacgacgag
gccgtcggcgacggtgagctggaactgctgcaacgcgccttcgagcgcagcgaatgggcc
ggccgcaccccgcacgacgtggaggtcccgttctccgccgaggtggacggcatcaacctg
cgcgggcggatggacgcggtgttcgccgacgacgacggcggctggacggtgctggactgg
aagaccggcggcgtgccggggccggaccggatgcccgcgctgtcggtgcagctggccgcg
taccggctggcctggtcggtgctggccggggtgccgctggagaaggtgcgcgcggcgttc
cactacgtccgcgacgggcgcacggtcaaccccgtcgacctgctggatttcgacgggctg
cgcgaactgctgcggtcggtaccggaggaatga
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