Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446: Aaci_0410
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Entry
Aaci_0410 CDS
T00985
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
aac
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Pathway
aac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aaci_0410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aac03400
]
Aaci_0410
DNA repair and recombination proteins [BR:
aac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aaci_0410
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aaci_0410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
UvrD-helicase
Microtub_bd
UB2H
Kinesin
T6SS_VgrG3-like_C
FlaG
DUF1131
Motif
Other DBs
NCBI-ProteinID:
ACV57469
UniProt:
C8WS35
LinkDB
All DBs
Position
473832..475823
Genome browser
AA seq
663 aa
AA seq
DB search
MSQLPGKFELVTDMKPQGDQPQAIEALVDGVYSGLRHQTLLGVTGSGKTFTMANIIAEVN
RPTLVIAHNKTLAAQLAAEFRAFFPNNAVEYFVSYYDYYQPEAYIPSTDTYIEKDAKIND
EIDKLRHSATAAILERNDVLVVASVSAIYGLGNPEEYRHHVLSLRVGAVMDRNQMLRKLV
DMQYTRNDINFTRGTFRVRGDVVEIFPASRDENAIRVELFGDEIDRISEINVLTGEVVAR
RSHFSVFPASHYVTSRERLERAIERIRAELEERLAELRAQGKLLEAQRLEQRTHYDIEMM
LEMGFCSGIENYSRHLEGREAGEPPYTLLDYFPPGFLTFIDESHVTIPQLRGMYNGDRSR
KLTLIEHGFRLPSAADNRPLKFEEFERAVGQCIYVSATPGPYEQQHQQRIVEQIIRPTGL
VDPEIHVRPVKGQIDDLVGEIRERIRRDERVLVTTLTKKMAEDLTDYLKELGIKVRYLHS
DIKTIERMVILRDLRRGVFDVLVGINLLREGLDLPEVSLVAILDTDKEGFLRSHTSLIQT
IGRAARNANGTVIMYADTITESMRIAIEETERRRQKQIAYNREHGITPQTVRKAVRDVIE
STKVAESEEDYVAVAEKAQKLSGRERKELIAKLEQEMKAAAKALKFERAAELRDMIMELM
DAS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaattacctggcaagttcgagcttgtgacggacatgaaacctcagggcgatcag
cctcaggccattgaggcgctcgtcgatggggtgtacagcggcctccgtcaccagacgttg
cttggcgtgacgggatcggggaagacgtttaccatggccaacatcatcgcggaggtcaac
cgcccgacgctggtcattgcgcacaacaagacgctcgccgcgcagttggcggcagagttt
cgcgcattctttcccaacaacgcggtggagtatttcgtcagctactacgattactatcag
ccggaggcgtacattccgtcgacggacacgtatatcgagaaagacgcgaagatcaacgac
gagatcgacaaactgcgccactccgcgacggcggccattctggagcggaacgacgtgctg
gtggtcgcgagcgtatccgccatctacggcctcggcaatcctgaggagtatcggcatcac
gtgctttcgctgcgggtgggtgccgtgatggaccgcaaccagatgcttcgcaagctggtg
gatatgcaatatacccgcaacgacatcaacttcacgcggggtacgttcagggtgcggggg
gacgtcgtcgaaattttcccggcatcccgcgacgagaatgccattcgcgtcgaattgttt
ggggacgagatcgaccgaatctcggagatcaacgtgctgaccggcgaagtggtggcgcga
aggtcgcacttcagcgtgtttcccgcgtcgcactatgtcacgtcgcgcgagcggttggag
agggccatcgagcgaattcgcgcggagttggaggagcggctcgcggaactgcgcgctcag
ggcaagctgctggaggcgcagcgactcgagcagcggacccattacgacattgaaatgatg
ctcgagatgggattttgctccggaatcgagaactattcgcggcacctcgagggccgcgaa
gccggagagcctccgtacacgctgctcgattactttcctccgggctttctcacgttcatc
gacgagtctcacgtcaccatcccgcagctgcgaggcatgtacaacggcgaccgaagccgc
aagctgacgctgatcgagcacgggttccggctgccttcggccgcagacaaccggccgctc
aagttcgaggagttcgagcgggccgtggggcagtgcatctacgtcagcgccacgcccggg
ccttacgagcagcagcatcagcagcgcatcgtcgagcagatcatccgcccgacagggctt
gtggatccggagatccacgtgcggcccgtcaaggggcagattgacgatctcgtcggcgag
atccgcgagcgcatccggcgtgacgagcgcgtcctcgtgaccacgctgacgaagaagatg
gcggaggacctgaccgattatctgaaagagctcggcatcaaggtccgctaccttcattcg
gacatcaagaccatcgagcgcatggtgattttgcgcgacctccggcgcggcgtgttcgac
gtgctggtggggatcaacctcctgcgagaggggctggatctgccggaggtctcgctggtc
gcgatcctggacacggataaggaaggctttctccggtcgcacacgtcgctcattcagacc
atcggccgcgcggcacgaaacgcgaacggcacggtcatcatgtacgccgacaccatcacc
gagtcgatgcgcatcgccatcgaggagacggagcgcaggcggcaaaagcagatcgcgtac
aaccgagaacacggcatcacgccgcagaccgttcgcaaggcggtacgggacgtgattgag
tccaccaaggtggcggagtcggaagaggattacgtggccgtggcggagaaggcgcaaaag
ctgtcgggccgcgagcgcaaggagctcatcgcgaagctggagcaggagatgaaggcggcc
gcaaaagctttgaagttcgagcgcgccgcggagctgcgggacatgatcatggaactcatg
gacgcgtcgtga
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