Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446: Aaci_0959
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Entry
Aaci_0959 CDS
T00985
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aac
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Pathway
aac03420
Nucleotide excision repair
aac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aaci_0959
03430 Mismatch repair
Aaci_0959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aac03400
]
Aaci_0959
Enzymes [BR:
aac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aaci_0959
DNA repair and recombination proteins [BR:
aac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aaci_0959
MMR (mismatch excision repair)
Other MMR factors
Aaci_0959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
CarD_TRCF_RID
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ACV57999
UniProt:
C8WV10
LinkDB
All DBs
Position
1033231..1035348
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AA seq
705 aa
AA seq
DB search
MLDVTDILRGLNPEQRDAVTTTSGPLLVVAGAGSGKTSVLTRRIAYLIAHAGVAVHEILA
ITFTNKAAREMKTRIRDLIGPRADDLWMGTFHSICVRILRREADRLGYQPNFTILDSEDQ
EALVQQCLLDLGYDLKTHDARSIKHRISQWKNEGATRVVNESNPSDLIADRVMELYNKRL
FAANAMDFDDLIGHTVRLLEQNDDLRDKYQEKFRHVLVDEYQDTNGIQFRLLRLLCAKHR
NLCAVGDADQAIYAWRGADSEHMLRFERDFPDAKIVVLTRNYRSTQEILDAANSVIAHNP
RRRPKELRSTRGHGDKPLVVRLPDGAAEAHYVAEAIEEHVRNGGRYEDCAVLYRANAQSR
AIEEKLLERAIPYTVVGGMTFYDRREVKDVLAYLRVLVNPQDEISLLRIINRPKRGLGDT
AVDRLLEFAHAEGMSLYEALAHGEEAGLSERTAEAARQFHASLQELALWMEGMAVSEFLA
EVLHATRYREMYLESGKKEDLARVENIDELFSVTRSFDERRGGTVAEFLAEVSLLSDIDK
ERDRGKGSVRLMTLHASKGLEFPVVFLVGMEEGLFPHARSMDDPLRIEEERNLCYVGLTR
AMDRLVLTHAAWRTLYGQTVAREPSRFLAEIREDLVVRVDLAEALEPEVLRPGDRVVHPQ
HGQGIVLSVESHAGEERVQVMFHPSIGMKWVSKKGLRTDGAVVVQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgatgtgaccgacattcttcgcggactgaatcccgagcagcgagacgccgtcacc
accacgagcggcccgctcctcgtggtggcgggggcgggaagcggcaagacgagcgtactc
acgcggcgcatcgcgtatctcatcgcgcacgccggcgtggcggtgcacgagattctcgcc
atcaccttcacgaacaaggccgcgcgcgagatgaagacgcgcattcgcgatctcatcggt
cctcgcgcggacgatctgtggatggggacgtttcacagcatctgtgtccgcatcctgagg
cgcgaggcggatcggctgggctaccagccgaatttcaccatcctcgattcggaggaccag
gaggccctggtccagcagtgtctgctcgatctcggctacgatctcaaaacgcacgacgcg
cgctccatcaagcaccgcatctcccaatggaagaacgagggcgccacgcgcgtcgtcaac
gagtcgaatccgtcggacctcatcgcggatcgggtgatggagctctacaataagcgcctt
ttcgctgcgaacgcgatggactttgacgatctcatcgggcacacggtccggctcctcgag
caaaacgacgacctgcgtgacaagtatcaggagaagttccggcacgtgctcgtggacgag
taccaggatacgaacggcatccagttccgcctgcttcgccttctctgtgcgaagcaccgc
aacctgtgcgccgtcggcgacgccgatcaggccatctacgcctggcgcggcgcggacagt
gagcacatgctgcggttcgagcgggactttccggacgcgaagatcgtggtgctcacgcgc
aactaccgctcgacgcaggagatcttggatgcggccaacagcgtgatcgcccacaacccg
aggcggcgacccaaagagcttcgctccacgcgcgggcatggcgacaaaccgctggtggtg
cgtctgccggatggcgcggccgaagcacattacgtcgcggaggccatcgaggagcacgtg
cgaaatggggggcggtacgaggactgcgcggtgctgtaccgggccaacgcgcagtcgcgc
gccatcgaggaaaagttgctcgagcgcgcgattccgtacacggtcgtgggcgggatgacc
ttctacgatcggcgcgaggtcaaggacgtcctcgcgtatctgcgcgtcctcgtcaatccg
caggacgagatctcgctccttcggatcatcaaccggccgaagcgaggcttgggcgacacg
gcggtggacaggctgctcgagttcgcgcacgccgagggcatgagcttgtacgaggcgctc
gcgcacggcgaggaggctgggctgtccgagcgcaccgcggaggccgcgcgccagtttcac
gcctcgctgcaggaacttgcgctctggatggagggcatggccgtctcggagttcctggcg
gaggtcttgcacgccacgcgctaccgcgagatgtacctcgagtcggggaagaaggaggat
ctcgcccgcgtggagaacatcgatgagttgttcagcgtgacgcggtcgttcgacgagcgc
cggggcgggacggtggcggagttcctcgcggaggtgagcctgctctcggacatcgacaag
gagcgcgatcgcggcaagggatctgtccggctcatgacgctgcacgcgagcaaagggctc
gagttccccgtggtcttcctcgtgggcatggaggaggggctctttcctcacgcgcgatcg
atggacgatccgctgcgcatcgaggaggagcgcaacctctgctacgtgggcctgacgcgc
gcgatggacaggctcgtgctcacgcatgccgcctggcgcacgctgtacggccagacggtg
gctcgcgaaccgtcgcggttcctcgccgagatccgcgaagatctcgtggtgcgcgtcgat
ctcgccgaggcgcttgaaccggaggtcttgcgccccggggatcgcgtggtgcatcctcaa
catgggcagggcattgtgctttcggtcgagtcgcacgccggagaggaacgcgtgcaagtg
atgttccatccatccataggtatgaaatgggtgtcgaagaaaggattacggacggacggc
gccgtcgtggtacaatga
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integrated database retrieval system
