Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446: Aaci_1427
Help
Entry
Aaci_1427 CDS
T00985
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
aac
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Pathway
aac03030
DNA replication
aac03430
Mismatch repair
aac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aaci_1427
03430 Mismatch repair
Aaci_1427
03440 Homologous recombination
Aaci_1427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aac03032
]
Aaci_1427
03400 DNA repair and recombination proteins [BR:
aac03400
]
Aaci_1427
Enzymes [BR:
aac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aaci_1427
DNA replication proteins [BR:
aac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aaci_1427
DNA repair and recombination proteins [BR:
aac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aaci_1427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
Rv2179c-like
RNase_H_2
tRNA_anti-codon
DNA_pol_A_exo1
DEDDh_C
DNA_pol3_a_NII
Zn-ribbon_8
YhfH
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ACV58453
UniProt:
C8WWI2
LinkDB
All DBs
Position
1475936..1480258
Genome browser
AA seq
1440 aa
AA seq
DB search
MAIAEHAVRERALARVRSVRVRRATQEIRVYVESPFATSGSDVDAFSSFYRDLAEIHELC
ASAFGSSCAWNIEVAPADVVSASEAERAMRALAAVYEERSHVSGKWLSQARLTVEAVDEP
KRFRARIRVPSQPIADQLKQKGVAEWLASEARRAFGLDVAVLVEVDETACEDVLAAGEKL
KQEAEARWRRQLAEEAKSAKEQPKEPDGRNDTGAAQGVEPLVVGQMYDEPAPIPLRDIVD
EMRRATVVGEVFGVERRTLPSGRTLIQFAITDHTDSISAKIFVQSERDLQATSHLADGVW
VKIQGQVQFDPYAKEMVFMVQSMRPHDAPRRIDTAEVKRVELHAHTTMSALDGVVSAAAL
VKRAAEWGHDAIAITDHGVCQAYPEAYQAAKKHGVRLVLGVEAYVVDDGGLLVYRECDRP
LDDETEYVVFDTETTGLNAREDTLIEIAAVKVKAGQIVDTYATLIDPERSLDPKIVELTG
ITNEMVAGQPKLREALDGFRQFARGAVLVAHNAEFDVGFLNQCAERLGLDPWEQPVIDTL
ALARVLYPGEKNYKLKTLTQKFSVDLVNHHRALADSEATAKVFVHMLKDAKARGIHNLLD
MNHLRGQIDISRVRPFHATVLVRNREGLRNLYRLVSIAHTQYLHRVPRIPKSALARHREG
LLIGTACRQGELVEAFFRGKSEDEIDTLLEFYDYLEIQPVSHYEPLVREGVVASFEQVRE
LLRNIVEIGKRLNKPVVATGDVHYLDEHDAIFREIFLQSQKLDTKQPPLHFRTTDEMLEE
FAFLGEEDARTVVIDNPRRLAALCDDVKPIPDELHTPVIEGAEDEIRRLAYDKAKRIYGD
PLPELVEKRLERELNAIISHGYAVIYLIAHKLVTKSLSDGYLVGSRGSVGSSLVATMTDI
TEVNPLPPHYVCLSCHYHEFFLRGEYGSGFDLPDKACPNCGAKLHKDGQDIPFETFMGFD
GDKVPDIDLNFSGEYQPRAHRYTEELFGKDHVFRAGTISVVAEKTAYGYVRKFAEERGLV
LRNAEIERLVRGCTGVKRTTGQHPGGQVVVPHYVEIYDFTPIQYPADDTSSETLTTHFDY
HSGLENCLLKLDILGHDDPTVIRMLQDLTGVDPKSIPLDDPDVLELFRSTRPLGVTPEEI
RSTTGTYAIPEFGTRFVRQMLEDTRPTTFSELVRISGLSHGTDVWLNNAQTLIREQIATL
SEVICARDDIMLYLIQKGLDPARAFKIMEGIRKGKGVKPEDEAYMREHGVPDWYIESGKK
IKYMFPKAHAAAYVLMAVRIAWFKVHRPLAFYATYFTVRADDFDVAVMTAGREAILKKID
EIEAKGNAASAKEKSFLTVLEVALEMVARGYRFLPIDLYKSHATQFLIEEEARGLRPPFA
AIPGIGETAARNLYEAAQQGEFLSLEDLQSRARASRAVIDVLMELGCLDGLPETNQLSLF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgccgagcacgccgtccgggaacgggcgttggccagggttcgaagcgtccgt
gtgcgcagggcgacccaggagatccgcgtatacgtggagtcgccctttgccacctcgggg
tctgacgtagacgcgttctcttctttctatcgcgatctcgccgagatccacgagctgtgc
gcctcggcgtttggctcgtcctgcgcatggaacatcgaggtggcgcctgcagacgtcgtt
tccgcgtcggaggcggagcgcgcgatgcgcgccctcgccgccgtgtacgaggagcggtct
cacgtttcgggcaaatggctgtcgcaggcaagattgacggtggaggcggtggacgagccg
aagcgttttcgcgccagaatccgcgtcccgagccagccgattgcagatcagctcaagcag
aagggcgttgcggagtggctcgcctcggaggctcgtcgcgcgtttggcctggatgtcgcg
gtcctcgtcgaggtggacgagacggcttgtgaggatgtccttgcggcgggcgagaagctg
aagcaggaggccgaggcccgttggcggcgccagctcgcggaagaggcgaagtcggccaaa
gagcagccgaaagagccggatggacggaatgacaccggcgccgcgcagggggtggagccg
cttgtcgtcggccagatgtacgacgagcccgctcccatcccgctgcgggacatcgtcgac
gagatgcgccgcgccacggtggtgggcgaggtcttcggcgtcgagcgcaggacgctgccg
agcgggcgcacgctcattcaatttgccatcacggatcacacggactccatctcggccaag
atattcgtgcagtcggagcgagacctccaggccacgtctcatctcgcggacggcgtgtgg
gtcaagattcagggccaggtgcagttcgacccgtatgccaaggaaatggtattcatggtg
cagtcgatgcgcccgcacgatgcgcctcggcggatcgacacggcggaggtcaagcgcgtc
gagctgcacgctcacaccaccatgtcggcgctggatggcgtcgtgagcgctgcggcgctg
gtgaagcgggcggcggaatgggggcacgacgccattgccatcacggatcacggcgtgtgc
caggcgtatccggaagcgtaccaggcggccaagaagcacggggtgcggctcgtgctcggc
gtcgaggcgtacgtggtggacgacggtggacttttggtgtatcgagagtgcgatcggccg
ctggacgacgagaccgagtatgtcgtgttcgacacggagacgaccggcctcaacgcgcgg
gaggacacgctcatcgagatcgccgcggtgaaggtcaaggcggggcaaattgtggacacg
tacgcgacgctcatcgatcccgagcgatcgctcgacccgaaaatcgtcgagttgacgggc
atcacgaacgagatggtggccggtcagccgaaactgagggaggcgctcgacggatttcgc
cagttcgcgcgcggcgccgtgctcgtggcccacaacgcggagttcgacgtgggctttttg
aaccagtgcgccgagcggctgggcctcgacccatgggagcaacccgtcattgacaccctg
gcgctcgcgcgcgtgctgtacccgggcgagaagaattacaagctgaagacgctcacccag
aagttctccgtcgatctcgtcaaccaccaccgggcgctggccgacagcgaggcgacggcc
aaggtgttcgtgcacatgctgaaagacgcgaaggcgcgcgggattcacaacctgctggat
atgaaccacctccgcggccagattgacatctcgcgcgttcggccttttcacgccaccgtg
ctcgtccgcaaccgcgaggggcttcggaatctgtatcgcctcgtctccatcgcgcacacc
cagtacctgcaccgcgtgccgcgcattccgaagagcgcgcttgctcgccatcgcgagggg
ttgctcatcggcacagcgtgtcggcagggcgagctcgtcgaggccttcttccgcgggaaa
tccgaggacgagatcgacacgttgctcgagttctatgactatctggagatccagccggtc
agtcattacgagcctcttgtgcgagagggcgtcgtggcgtcgttcgagcaggtgcgcgaa
ctgctgcgcaacatcgtggagattggcaagcgcctgaacaagccggtcgtggccacgggc
gacgtgcattatctggacgagcacgacgccatcttccgggagatctttcttcaatcgcag
aagctggatacgaagcagccgccgcttcacttccgaacgaccgacgagatgctcgaggag
ttcgcgtttttgggggaagaggacgcgcgcaccgtcgtgatcgacaacccgcgccgtctg
gcggcgctgtgcgacgacgtgaagccgattcccgatgagcttcacacgccggtcatcgaa
ggggcggaagatgaaatccggaggctcgcctacgacaaggcgaagcgcatctacggggat
ccgctgcccgagctggtcgaaaagcggctggagcgcgagctcaacgccatcatctcgcac
ggctatgcggtcatctacctgattgcgcacaagctggtcaccaaatcgctgagcgatggg
tatctggtcggcagccgcggctcggtcggttcgtcgctcgtggccaccatgacggacatc
accgaggtgaatccgctgccgccgcactacgtgtgcttgtcgtgtcactatcacgagttt
ttcctgcgcggggagtacggatccggcttcgacctcccggacaaggcgtgccccaactgc
ggcgccaagctgcacaaggacgggcaggatatcccgttcgagacgttcatgggctttgat
ggcgacaaggtgcccgacatcgacctgaacttctccggggagtatcagccgagggcgcat
cgatacacggaggagttgttcgggaaggatcacgtgtttcgcgcgggcaccatctccgtg
gtggccgagaagacggcctacgggtatgtgcggaagttcgccgaggagcgcgggttggtg
ctgcgcaatgccgagatcgagcggttggtccgaggatgcacgggcgtgaagcggaccacc
gggcaacatccgggcgggcaggtggtggtgccgcactacgtggagatctacgatttcacg
ccgattcaatacccggcggacgatacgtcgtcggagacgctcacgacgcacttcgattac
cactccgggctcgagaactgcctgttgaagctcgacatcctcggccacgacgatccgact
gtgatccgcatgctgcaggatctcacgggcgtcgatccgaagtccatcccgcttgacgat
cccgacgtgctggagctgttccgaagcacaaggccgctcggcgtgaccccggaggaaatc
cggtcgaccactggcacctacgccattccggagtttggcacgcgctttgttcggcagatg
ctcgaggacacgaggcccacgacgttctcggagctcgtgcgcatctccgggctgtcgcac
ggcacggacgtctggctgaacaacgcccagacgctcatccgcgagcagattgcgacgttg
tccgaggtcatctgcgcccgagacgacatcatgctctacctcatccagaaggggctcgat
ccggcgcgcgcattcaaaatcatggaaggtatccgcaaggggaagggtgtcaaaccggaa
gacgaggcgtacatgcgggagcacggcgtgccggactggtacatcgagtcgggcaagaag
atcaagtacatgtttccgaaggcgcacgccgcggcctacgtgttgatggccgtccgaatc
gcgtggttcaaagttcaccgaccgctcgcgttctacgcgacctatttcacggtccgcgcg
gacgacttcgacgtggctgtgatgacggcgggccgggaggccatcttaaagaagatcgac
gagatcgaggcgaagggcaacgcggcctcggccaaggagaagagcttcctgacggtgctc
gaggtcgcgctcgagatggtcgctcggggatatcggtttttgccgattgatctgtacaag
tcgcacgcgacccagttcctcatcgaggaggaggcccgtggcctgaggccgcccttcgcc
gccattcccgggattggggagacggcggcgcgcaacctgtatgaagcggcgcagcagggc
gaattcctgtcgctcgaagatcttcagtcgcgggcgcgcgcgtcccgggccgtgatcgac
gtgctcatggaactcggttgcctcgacgggctgccggagaccaatcagctttccttgttc
tga
DBGET
integrated database retrieval system
