Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446: Aaci_1472
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Entry
Aaci_1472 CDS
T00985
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aac
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Pathway
aac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aaci_1472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aac03019
]
Aaci_1472
03009 Ribosome biogenesis [BR:
aac03009
]
Aaci_1472
Enzymes [BR:
aac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Aaci_1472
Messenger RNA biogenesis [BR:
aac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Aaci_1472
Ribosome biogenesis [BR:
aac03009
]
Prokaryotic type
rRNA helicases
Aaci_1472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACV58497
UniProt:
C8WWM6
LinkDB
All DBs
Position
1526231..1527856
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AA seq
541 aa
AA seq
DB search
MWEETRQAEERKVESMSSFESFGLNRRVLQAIHDMGFEEPSPIQAACIPVVLEGRDVIGQ
AQTGTGKTAAFGIPLVERVSTEPRVQAIVLTPTRELAIQVAGEIRKIAKYKRVRSVPIYG
GQSIVHQIRALKQGVQIVIGTPGRVLDHIHRGTLSLSDVRMVVLDEADEMLDMGFIDDIE
AILRETPSDRQTMLFSATFPNEVKRLALRYMRDPQHITVNRGEVTVPQIDQVCYKVLERN
KLDSLCRIVDSEDIQLGIIFCRTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKF
RKNEIELLVATDVAARGLDVDDVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTP
REYKLLKQIEREIKQKITVREVPSLEDVAERQAEMWRSKIVDVIREGGLAPYRAILSGLV
DEHDPIDIASALLKLASSGDGNRTESDEYDFGDTGARPGMVRFFVNVGRTSRMSPQDFVR
AISEEAGVPGDAVGRIDMFEKFTFIEVEEESAPFVYEALRQSRINGTRVNLEPAKPRSSR
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaagagacaagacaggcagaggagagaaaggttgagagtatgtcatcgtttgag
tcttttgggttgaaccgccgcgtactgcaggcgattcacgatatggggtttgaggagcca
tcgccgattcaggcggcttgtattccggtggtgctggagggccgggacgtgatcggccag
gcgcagaccggcacggggaagacggcagcattcggaatcccgctggtggagcgggtgtcg
acggaaccgcgcgtgcaggccatcgtgctgacgccgacgcgcgagctggcgattcaggtg
gcgggtgagatccgcaaaatcgcgaaatacaagcgcgtccgatccgtcccgatttacggc
gggcagtccatcgtgcaccaaatccgcgcgctgaagcaaggcgtgcagatcgtcatcggc
accccggggcgggtgttggatcacattcaccgcggcacgttgtcgctcagcgatgtccgg
atggtggtgctcgacgaagccgatgagatgctcgacatgggcttcatcgacgacattgaa
gccattttgcgcgagacgccgagcgatcggcagaccatgctgttctcggccaccttcccg
aacgaggtcaagcgcctcgcgctgcgttacatgcgcgatccgcagcacatcacagtcaat
cgcggcgaggtgaccgtgccgcagatcgatcaggtgtgctacaaagtgttggagcgcaat
aagctcgacagcctctgccgcatcgtggacagcgaggacatccagctcgggatcatcttc
tgccggacgaagcgcggcgtggacgatctcgtggaggccctgcttgcgcgcggctacctc
gctgacggacttcatggcgacctgagccaggctcagcgcgatcgcgtcatgcggaagttc
cgcaaaaacgagattgagctattggtcgcgacggacgtggcggctcgcgggctggacgtg
gacgacgtgacgcacgtgatcaactacgacgttccgcaggatcccgagtcgtacgtgcac
cgcatcggacgcacgggccgcgcaggcaagcgagggttggccatcacgctcgtgacacct
cgagagtacaaattgctgaagcagattgagcgagaaatcaagcagaagatcaccgtccgc
gaggtgccgtcgctggaggacgtggcggagcggcaggcggagatgtggagaagcaaaatc
gtggacgtcattcgcgagggtggcctcgcgccgtatcgcgccattctgagcggcctcgtg
gacgagcacgatcccatcgacatcgcctcggccctcctcaaactggcgtcgtcaggggat
ggaaatcgcacggagtcggacgaatacgactttggggacacgggagctcggcccggcatg
gtgcggttcttcgtgaatgtgggccgcacgtctcggatgagtccgcaggacttcgtccgc
gccatttccgaagaggccggtgtgccgggcgacgcggttgggcggatcgatatgttcgag
aagtttacgttcatcgaggtggaggaggagagcgcgccgttcgtctacgaggcgttgcgc
caaagccgaatcaatggcacgcgggtgaatttggagcctgcgaagccgcgctcgtcgcgc
cgctga
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