Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446: Aaci_3023
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Entry
Aaci_3023 CDS
T00985
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aac
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Pathway
aac03420
Nucleotide excision repair
aac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aaci_3023
03430 Mismatch repair
Aaci_3023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aac03400
]
Aaci_3023
Enzymes [BR:
aac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aaci_3023
DNA repair and recombination proteins [BR:
aac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aaci_3023
MMR (mismatch excision repair)
Other MMR factors
Aaci_3023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_16
AAA_7
Y_phosphatase
Motif
Other DBs
NCBI-ProteinID:
ACV60026
UniProt:
C8WYD2
LinkDB
All DBs
Position
pAACI01:complement(62908..65028)
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AA seq
706 aa
AA seq
DB search
MDTQCIEVRCGSARHHLSYEDLFTPEVQSLFEECYALGVEVRCLCNPDRPVPMHLRRVRI
RPPTYTVVTNPLGIHHPNCPRFRQSRHPSASHKTRDAQAVETTPNHIEEWLPHRRIFVPT
LDQLNDAQREAATHKNGPCMVVAAAGSGKTAMLIARIQHLINQGVRPGDILACTFTRKAA
QEMTDRLLAAVGERGKAVTIGTIHSVAYRMVTPELGEDWRVLSDPTWMIERVLEEPSGKN
PHGVGPVMKLGEAISAIAKAKADALGPHQVSDPLTKVYAAYETLKAERKTLDFEDMILHA
IRLFRTDEAFAKRWRQRWRYVMVDEFQDTNTAQWLFLLELVKAHNNLFVVGDDWQSIYYF
RGARPDLMKEFLRRFPDAKRVTLETNYRSHDLIVDVGRRIIRLNDGHQLPKRVVAHRSMP
EGAIAQIVTVRSDLEEARFVAQELQRLRKEHGVSWSDCAVLYRTNIQSRLFEEALADADI
PYHVVGDKHFYESPDVKIILDYLRTTQDTSDPTVWGHLLNRPKRYIPIDVVHEVQHGGWE
AVVAHPKCRAFVTTIDTLRRIEEPSKAIQWLVDNHPGLVRQQDEDEPIKWVDSLIASASR
YKTVASFLRFVDWIIEKSKEPKDEAVQLMTIHKAKGLEWTTVFVAGLAEGLLPHKKALKG
EELREETRLCYVAATRARDNLYLMAAKWYGDKEREVSRYVNAVKNP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcagtgcatcgaagttcgctgtggcagtgctcgtcatcacctgtcgtatgag
gacttgttcactcctgaagttcaatccttgttcgaagaatgctacgcacttggcgtcgaa
gtgcgctgtctctgcaaccccgaccgtccagtccccatgcatctgcgccgcgtccgcatc
cgccctccgacgtacactgtcgtcacgaatcctctgggcatccatcacccgaactgtccg
cggtttcgccaatcacgtcatccaagcgcgtctcacaaaacgcgtgacgcacaagccgtc
gaaactacgccaaatcacatcgaagaatggcttccgcataggaggatctttgtgcccacc
ttagatcagctgaacgacgcacaacgagaagctgcaacgcacaaaaacggtccttgcatg
gtcgtcgccgcggccggttcaggaaagaccgccatgctcatcgcgcgcatccagcatctc
atcaaccagggcgtaagacctggggacatcctcgcgtgcacgttcacgcgcaaggccgcg
caggagatgaccgaccgcctgcttgccgccgtgggcgaacggggaaaggccgtgaccatc
gggacgattcattcggtcgcatatcgcatggtcacgccagaactcggggaggactggcgt
gtgctgtcggaccccacgtggatgatcgagcgtgtgctggaggagccaagtggcaagaat
ccgcacggcgtcgggcccgtgatgaagctaggcgaggccatctccgccatcgccaaggcc
aaagcggacgcgcttgggccgcaccaggtgtctgaccctttgaccaaggtctacgcggca
tatgagacgctgaaggctgagcgtaagaccctggacttcgaggacatgatcctccacgcg
attcgcctgttccgcacggacgaagcgttcgcgaagcggtggcgtcagcgttggcgatac
gtcatggtggacgagtttcaggacacgaacacggcgcagtggctgttcttgttggaactc
gtcaaggcgcacaacaacctatttgtcgtaggggatgattggcagtccatttactacttc
cgcggggcacgcccggacctcatgaaagagttcctacgtcggtttccggacgcaaaaagg
gtcacgctggagaccaattatcgctcacacgaccttatcgtcgacgtagggcggcgcatc
atccggttgaacgacgggcatcagctccctaaacgcgtggtcgcgcaccgctcaatgccg
gaaggcgcgatcgcacaaatcgtgacggtgcgctctgacctcgaggaagcgcgcttcgtc
gcgcaggaactccagcgtctacggaaggagcacggagtatcctggagcgattgcgccgtg
ctctatcgaacgaacatccagtcgcggctctttgaagaagcgctcgccgacgcggacatt
ccgtatcacgtggtcggagacaagcatttctacgagtcgccggacgtgaaaatcatcctg
gactatctgcgaacgacgcaggacacgtccgatccgaccgtgtgggggcacctgctcaat
cgtcccaagcgctacatcccgatcgacgtcgtgcacgaggttcagcacggcggatgggag
gcggtggtcgcgcaccccaaatgtcgtgcctttgtgaccacaatcgacacgcttcgccgt
atagaggaaccttccaaagcgatacaatggttggtagacaaccacccgggtctagtacgc
caacaagatgaggacgaacccatcaagtgggtggattcgctcatcgcttcggcgtccaga
tacaagaccgtcgcgtcgtttttgcgtttcgtggattggatcatcgagaagtcgaaggag
ccgaaggacgaggctgtgcaactcatgaccatccacaaggccaagggcttggaatggacc
accgtgttcgtcgcaggcctcgcggaaggcctgttgccgcacaagaaggccttgaagggt
gaggaactgcgcgaagagacgcgcttgtgttacgtcgcggccacacgagcacgcgacaat
ctgtatctcatggcggccaagtggtacggagacaaggagcgggaagtctcacgttacgtg
aacgcggttaaaaatccgtga
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