Amycolatopsis acidiphila: LWP59_00030
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Entry
LWP59_00030 CDS
T07896
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aacd
Amycolatopsis acidiphila
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacd03032
]
LWP59_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_00030 (gyrB)
Enzymes [BR:
aacd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LWP59_00030 (gyrB)
DNA replication proteins [BR:
aacd03032
]
Prokaryotic type
DNA Topoisomerases
LWP59_00030 (gyrB)
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LWP59_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UIJ60137
LinkDB
All DBs
Position
6535..8499
Genome browser
AA seq
654 aa
AA seq
DB search
MAAKNDYNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATRV
DVTLLADGGVRVVDDGRGIPVEEHPVHKRSTLEIVHTVLHAGGKFDSDSYAVSGGLHGVG
VSVVNALSAALDVEVYRDGKMWRQHYDHSEPGELIEVGPTDKRGTTTTFWADPDIFETTT
YNAETVARRLQEMAFLNKGLSITLRDERVSEADAETDVDGQQARVKDRTYHYPGGLEDFV
KHINGSKDPIHPSVISFDAKGEGLEVEVAMQWNNSFTPSVHTFANTINTHEGGTHEEGFR
AALTRVVNAYARDKKLLKDKDENLSGEDVREGLAAIVSIKLAEPQFEGQTKTKLGNSEAK
TFVQTKTNEWLADWFERNPTEAKTIINKSVASAQARMAARRARDLVRRKGAMDIGGLPGK
LKDCQSTNPEECELYIVEGDSAGGSAKEGRESRFQAILPIRGKIINVEKARIDRVLKNNE
VQALITALGTGIHDDFDLSKLRYHKIVLMADADVDGQHIRTLLLTLLFRFMKPLIEHGHV
YLAQPPLYKIKWPRAEPEYAYSDKERDGLIAAGAEAGRRLPKDDAIQRYKGLGEMNAEEL
WETTMDPAHRLLLQVTLDDAAAADELFSVLMGEDVEARRSFITRNAKDVRFLDV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaagaacgattacaacgcgtcctccatcaccgtgctcgaggggctcgaagcc
gtccggaaacgtcccggcatgtacatcggctcgaccggtgagcgcggtctgcaccatctt
atctgggaggtcgtggacaactcggtcgacgaggcgatggccgggtacgcgaccagggtc
gacgtgaccctgctcgcggacggcggtgtccgggtcgtcgacgacggccgtggcatcccg
gtcgaggagcacccggtgcacaagcggtccaccctggagatcgtgcacaccgtgctgcac
gccggtggcaagttcgacagcgactcctacgcggtgtccggcggcctgcacggcgtcggc
gtctccgtggtgaacgcgctgtccgccgcactcgacgtcgaggtctaccgcgacggcaag
atgtggcgccagcactacgaccactccgagccgggcgagctgatcgaggtcggcccgacc
gacaagaggggcaccaccaccacgttctgggcagacccggacatcttcgagaccaccacg
tacaacgccgagaccgtcgcccgtcgcctgcaggagatggccttcctcaacaagggcctg
tccatcaccctgcgggacgagcgggtctccgaggcggacgccgagaccgatgtcgacggc
cagcaggccagggtgaaggaccgtacctaccactacccgggcgggctcgaggacttcgtc
aagcacatcaacggcagcaaggacccgatccaccccagcgtgatctccttcgacgccaag
ggtgaaggcctcgaggtcgaggtcgcgatgcagtggaacaactccttcaccccgtcggtg
cacaccttcgcgaacacgatcaacacgcacgagggcggcacgcacgaagaaggcttccgc
gccgcgctcacccgcgtcgtcaatgcgtacgcgcgcgacaagaagctgctgaaggacaag
gacgagaacctctccggtgaggacgtgcgcgaggggctcgccgcgatcgtgtccatcaag
ctcgccgagccgcagttcgagggccagaccaagaccaagctgggcaacagcgaggcgaag
acgttcgtgcagaccaagacgaacgagtggctggccgactggttcgagcgcaaccccacc
gaggccaagacgatcatcaacaagtcggtcgcgagcgcgcaggcgcggatggccgcgcgg
cgcgcgcgggacctggtgcgccgcaagggcgcgatggacatcggcggcctgccgggcaag
ctcaaggactgccagtccaccaacccggaggagtgcgagctctacatcgtcgagggtgac
tccgccggcggttccgccaaggagggccgcgagtcgcggttccaggcgatcctgccgatc
cgcggcaagatcatcaacgtggagaaggcccggatcgaccgggtgctgaagaacaacgag
gtccaggcgctgatcaccgcgctgggcaccggcattcacgacgacttcgacctgtccaag
ctgcgctaccacaagatcgtgctgatggccgacgccgacgtggacggccagcacatccgc
acgctgctgctgacgctgctgttccggttcatgaagccgctcatcgagcacggccacgtg
tacctcgcgcagccgccgctgtacaagatcaagtggccgcgggcggaaccggagtacgcc
tactccgacaaggagcgcgacggcctgatcgccgccggcgccgaggccggccgcaggctg
ccgaaggacgacgcgattcagcgctacaagggtctcggcgagatgaacgccgaggagctg
tgggagaccaccatggacccggcgcaccggctgctgctgcaggtgaccctcgacgacgcc
gccgcggcggacgagctcttcagtgtgctgatgggtgaggacgtggaagcccgccgctcg
ttcatcacccgcaacgccaaggacgtccgtttcctcgacgtgtag
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