Amycolatopsis acidiphila: LWP59_00690
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Entry
LWP59_00690 CDS
T07896
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03030
DNA replication
aacd03430
Mismatch repair
aacd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LWP59_00690
03430 Mismatch repair
LWP59_00690
03440 Homologous recombination
LWP59_00690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacd03032
]
LWP59_00690
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_00690
Enzymes [BR:
aacd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LWP59_00690
DNA replication proteins [BR:
aacd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LWP59_00690
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LWP59_00690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TerB
DUF6264
YtpI
Motif
Other DBs
NCBI-ProteinID:
UIJ60252
LinkDB
All DBs
Position
138177..139682
Genome browser
AA seq
501 aa
AA seq
DB search
MTSFGTLRLARDGRFPATATDFTALDFRTTGLRPGHVVELAAVRARADGTVLTEFATLVD
PGRQVEPGPATLHRISRRDLDNAPEFGEVLGDLLDLCRGSVLVAHNLPFALEFLAAELAR
LNVRLPPLPVVGTLDAARQALHLPNAQLATVADALGIGEFPGHLALANARTVACVVSSLV
TTHRLAFTDPPRLPQLPRFTSGGRVLTRPVEDPAERSWLAELVERVRVGDGGDPLHEAYR
ELLKAAISDQYVSPDEAHELASLAAAAGIAVRRTHLDFVTAMREVAADDGVITEVEAHDL
TRVATALGVPEVARDLRTAERLRTPMRVLVLGETRAADALRAAVLAAGIQLAKNLTASVS
HLAIADDVPRQDPRLGRARERGIVVLDITTAWTVLGLLEPPPTPFSAPVSVRAATPPAPT
APPAFAPTARLAPVAPPPRSPATPARQLWAARALMAAGLVVMLFSILALFGGAPFAGGLV
LAVFGVGALCAGWYLADPAPN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacttctttcggcaccctgcggctggcccgcgacggccggttcccggcgacggccacg
gacttcaccgcgctcgatttccggaccaccggcctgcgccctgggcacgtggtcgaactc
gcggccgtgcgggcccgcgcggacggcaccgtgctcaccgagttcgcgacgctggtcgac
ccgggacgccaggtcgaaccgggaccggcgacgctgcaccgcatcagccggcgcgacctc
gacaacgcgccggagttcggcgaggtcctcggggacctgctggacctgtgccgcggcagc
gtcctggtcgcgcacaacctgccgttcgcgctggagttcctggccgcggagctggcccgg
ctgaacgtgcggctgccaccgcttcccgtggtcggcacgctcgatgccgcgcgccaggcg
ctgcacctgcccaacgcgcagctggcaacggtcgcggacgcgctcgggatcggggagttc
cccgggcacctggcgctggccaacgccaggacggtggcctgcgtcgtgtcgtcgctcgtg
acgacgcaccggctcgcgttcaccgacccgccgcggctgccgcagctgccgcggttcacc
tccggtggacgggtgctgacccggccggtcgaggatccggcggaacgctcgtggctggcg
gaactggtcgagcgggtgcgggtcggcgacggcggcgacccgttgcacgaggcctaccgc
gagctgctcaaggcggcgatctcggaccagtacgtctcgccggacgaggcgcacgagctg
gcctcgctcgccgcggcggccgggatcgccgtccgccggacgcacctggacttcgtgacg
gcgatgcgcgaggtggcggcggacgacggcgtcatcaccgaggtcgaggcccacgacctg
acccgcgtcgcgacggcgctcggggtgcccgaagtggcgcgtgacctgcgcaccgccgag
cggctgcgaacgccgatgcgggtgctggtgctgggcgagacgcgggcggcggacgccctg
cgcgcggcggtgctcgccgccgggatccagctcgcgaagaacctcaccgcgtcggtctcg
cacctggccatcgcggacgacgtgccccgccaggacccccggctcggccgggcgcgcgag
cggggcatcgtggtactggacatcacgacggcgtggaccgtcctcggcctgctcgagccg
cccccgacgccgttcagcgcccccgtgtccgtgcgcgccgccaccccgccggcaccgact
gccccgcccgccttcgcaccgacggcacggctcgccccggttgccccgccgccccggagc
ccggccacgccggcgcgtcagctctgggccgcccgcgccctcatggcggcgggcctggtc
gtgatgctgttctcgatcctcgccctcttcggcggtgcccccttcgccggcggcctggtc
ctggcggtgttcggcgtcggtgccctctgcgcgggctggtacctggccgacccggccccg
aactag
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