Amycolatopsis acidiphila: LWP59_01140
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Entry
LWP59_01140 CDS
T07896
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LWP59_01140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_01140
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LWP59_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
EF-hand_7
TGT_C2
Motif
Other DBs
NCBI-ProteinID:
UIJ60336
LinkDB
All DBs
Position
complement(228531..229508)
Genome browser
AA seq
325 aa
AA seq
DB search
MARAIWSGAINFGLVTVPVELYSATEDHTVHFRQFERDTSDRIRYRRVNERTGKEVDYND
IVKGYDLGDGEYVLVEQDELDEIAPGRSRSIDIEAFVDLDDIDPIFFQKSYWLAPSKEEF
GRAYGLLLQAMDRTNKAGVARFVMRGKEQIAAIRAGDNVLILDTLLFAEDLRDPMKELHK
LPSKTEARGKELDMAVSLIDSMTEDWQPEDYHDTYTERVHKLIDDKKAGRKVSVEAPPSE
PTKVVDLFEALSRSVESRKGGGGKKRPSSPPKKTPGKKTPDLSELSKAELDKMARELDVK
GRSKMSRAELEEAVSEARPARKRAS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcgatctggagtggtgcgatcaacttcggcctggtcacggtgccggtcgag
ctctacagcgcgaccgaggaccacaccgtgcacttccggcagttcgaacgcgacacctcc
gaccgcatccgctaccggcgggtgaacgagcgcaccggcaaggaagtggactacaacgac
atcgtcaagggctacgacctcggcgacggcgagtacgtactggtcgagcaggacgagctg
gacgagatcgcgccgggccgctcgcgctccatcgacatcgaggccttcgtggacctcgac
gacatcgacccgatcttcttccagaagagctactggctggcgccgtcgaaggaggagttc
ggccgcgcgtacggcttgctgctgcaggcgatggaccgcacgaacaaggcgggcgtcgcc
cggttcgtgatgcgcggcaaggagcagatcgccgccatccgcgccggggacaacgtgctg
atcctggacaccctgctgttcgccgaggacctgcgggacccgatgaaggagctgcacaag
ctgccgtcgaagaccgaggcccggggcaaggagctcgacatggcggtcagcctcatcgac
tcgatgaccgaggactggcagcccgaggactaccacgacacctacaccgaacgggtgcac
aagctgatcgacgacaagaaggccgggcggaaggtgtcggtcgaggcgccgccgtcggag
ccgacgaaggtcgtcgacctgttcgaggcgctctcgcgcagtgtggagagccgcaagggc
ggtggcgggaagaagcgcccgtcctcgccgccgaagaagacgccggggaagaagacgccg
gatctgtccgagctgagcaaggccgagctggacaagatggcgcgcgagctggacgtcaag
ggtcgctcgaagatgtcgagggcggagctggaagaggcggtgagcgaggctcgccccgcg
cgcaagcgcgcgtcctga
DBGET
integrated database retrieval system
