Amycolatopsis acidiphila: LWP59_05275
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Entry
LWP59_05275 CDS
T07896
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03420
Nucleotide excision repair
aacd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LWP59_05275
03430 Mismatch repair
LWP59_05275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_05275
Enzymes [BR:
aacd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LWP59_05275
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LWP59_05275
MMR (mismatch excision repair)
Other MMR factors
LWP59_05275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UIJ61068
LinkDB
All DBs
Position
1073448..1075529
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AA seq
693 aa
AA seq
DB search
MVDAAVRTNRPGLLDGLDPEQRAAAVAPRGPVCVLAGAGTGKTRTITHRIAHLIRSGHVS
PGQVLAVTFTTRAAGEMRTRLRTLGVEGAQALTFHAAARRQLRYFWPRVIGDRPWDLLEG
KLRLVGQAANKVGLGIEAEVLRDLASEIEWAKASLISPDDYPATAVRVQRDTPGTPQQVA
EVYRAYEKVKNSAQVLDFDDLLLHTTAVLEEHGEVAREFRDRYRCFIVDEYQDVTPLQQR
LLDAWLGGRDDLTVVGDANQTIYSFGGASPRPLLEFTRRFPEATVVRLERDYRSTPQVVE
LANKVIGAARNRPAGSRLRLIGQRSPGPEPRFAEFDDEPTEAAAVAARVRALLDAGVAAS
EIAILYRINAQSEAYEQALSEVGIPYLVRGGERFFDRREIRQAMSSLRVAAADPPPTELV
TAVRAVLARVGLTDQPPSGGAAKERWDALLSLVEVAEELAATVEGADLPRYVAELEQRAA
AQHPPTVEGVTLASLHAAKGLEWDAVFLVGLAEGTMPILHADGDDEAIEEERRLFYVGVT
RAREHLWLSWALSRHPGGRRHRRRSRFLYGLLPEHHPAARVPRSQSGKNGPKPRCRVCGG
PLLETMEIKLGRCGRCPSTLDEDLLDRLKEWRITRAKELKVPPFVVFTDATLIAIAEQQP
ADRGSLVSISGIGPSKVERFGAEVLAVINAERG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgcagctgttcgaacgaaccggccgggcctgctggacgggctcgatcccgag
caacgggccgccgcggtcgcgccgcgggggccggtgtgcgtgctcgccggcgcgggcacg
ggtaagacgcggacgatcacgcaccgcatcgcgcacctgatccgctcgggtcacgtctcg
ccggggcaggtgctggcggtcacgttcaccacccgtgcggcgggggagatgcggaccagg
ctgcggacgctcggcgtcgagggggcgcaggcgctgaccttccacgccgcggcgcggcgg
cagctgcgctacttctggccgcgcgtgatcggcgatcggccatgggacctgctcgagggc
aagctgcgcctcgtcggccaggccgcgaacaaggtgggcctcggcatcgaggcggaggtc
ctgcgcgacctcgccagcgagatcgagtgggcgaaggcgtcgctcatctcgcccgacgac
tacccggccacagccgtgcgcgtccagcgggacacccccggaacgccgcagcaggtcgcc
gaggtctaccgcgcgtacgagaaggtgaagaactccgcgcaggtgctcgacttcgacgac
ctcctcctgcacacgacggcggtcctcgaggagcacggcgaggtcgcgcgcgagttccgc
gaccggtaccgctgcttcatcgtcgacgagtaccaggacgtcaccccgctgcaacagcgc
ctgctcgacgcgtggctggggggccgtgacgacctcactgtcgtcggcgacgccaaccag
acgatctactcgttcggcggcgcctcaccgcgtcccctgctcgagttcacccgccgcttt
ccggaggcgacggtggtgcggctggagcgcgactaccggtcgaccccgcaggtcgtcgag
ctggcgaacaaggtgatcggcgcggcgcgcaaccggcctgccggttcccggctgcgcctc
atcgggcaacgctcgcccgggccggagccgaggttcgccgagttcgacgacgagccgacc
gaggccgccgcggtcgccgcgcgcgtccgtgccctgctcgacgccggggtcgcggcgagt
gagatcgccatcctgtaccgcatcaacgcgcagtcggaggcctacgagcaggcgctgtcc
gaagtgggcatcccgtatctggtccgcggtggggagcggttcttcgaccgccgcgagatc
cggcaggcgatgagttcgctgcgcgtcgcggcggcggatccgcctccgacggagctcgtc
acggcggtccgcgccgtgctcgcccgcgtcggcctgaccgatcagccgccgtccggtggc
gcggcgaaggagcggtgggacgcgctgctgtccctggtcgaggtggccgaggagctggcg
gcgacggtcgagggcgcggacctcccgcggtacgtggcagagctggagcagcgggcggcg
gcgcagcacccgccgacggtcgagggggtcacgctggcgtcgctgcacgccgcgaagggc
ctggagtgggacgccgtcttcctggtcgggctcgccgaggggaccatgccgatcctgcac
gcggacggcgatgacgaggcgatcgaggaggagcggcggctcttctacgtcggcgtcacg
cgggctcgcgagcacctgtggctttcgtgggcactgtcgcggcatccgggcgggcggcgg
caccgtcggcgcagcaggttcctgtacgggctgctgccggagcaccacccggcggcgcgc
gtcccgcggtcgcagtccgggaagaatggcccgaagccgcggtgccgcgtgtgcggcggg
ccgctgctggagacgatggagatcaagctcggccggtgcggccggtgtccgtccacactg
gacgaggatttgctcgaccggctgaaggagtggcgcatcacccgggcgaaggagctcaag
gtgccgccgttcgtggtgttcacggacgcgaccctcatcgcgatcgccgagcagcagccc
gccgaccggggaagcctggtgtcgatttcgggcatcggcccgagcaaggtcgaacgcttc
ggcgccgaagtcctggcggtgatcaacgccgagcgcggctga
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