Amycolatopsis acidiphila: LWP59_06290
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Entry
LWP59_06290 CDS
T07896
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aacd
Amycolatopsis acidiphila
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacd03032
]
LWP59_06290
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_06290
Enzymes [BR:
aacd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LWP59_06290
DNA replication proteins [BR:
aacd03032
]
Prokaryotic type
DNA Topoisomerases
LWP59_06290
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LWP59_06290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
LAGLIDADG_3
DNA_gyraseA_C
Intein_splicing
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
UIJ61239
LinkDB
All DBs
Position
1284144..1287917
Genome browser
AA seq
1257 aa
AA seq
DB search
MARRKTPTTRVDPAAFDQAGAQVFENPVKTEMEDSYLEYAYSVIHSRALPDARDGLKPVH
RRILFSMNEAGYRPSHAYVKSSRVVGDVMGRYHPHGDTAIYDAMVRLAQDFSMNAPLVDG
HGNFGSPDDGPAASRYCVVGDTRIRLADGSSPRIADVVDLPADSEAAADFEVLDKDGKPV
RVTKVFNSGVHPTIRTTTKSGFSLRGSENHLVLCLEAPLGVPLFQWRRLDELKPGAVVAV
ARNAWLQVVPTAREYMLGVLAGAWVSEGRASENRAGFNNTDEHFFGEVLHAYDQVVGGPR
YVSARRTRRDRKQVHELDIQDYAGGMAAFRESPLAELIGHQARDKFVPEFVWHGGWGVKR
AFLMALFEGDGGPRLAVDGFNVQYTSYSERLTSEVQELLAEFGVIARHCRYTRTSGAVEH
RLVISGLRNVRAFVERVGFLETKRAKVTELLRRSVLSPHRLSQDKVPFVADYVRGALDFD
RRGSDRKWLTQHNFDRVERWETERLRIIDRIKDTEVLATILPVMDSGYRFEEVTEVSAAE
PAEVYSVRVESDDHSFLAGGFVNHNTEARMSPEAMLLVGELGEETVDFRPNYDGSLQEPS
VLPAAYPNLLVNGTSGIAVGMATNMIPHNMGEVIGAARWLINHPNASLDKLMEFVPGPDL
PTGGMLLGLDEVRKAYETGRGVVRMRAKVQIGPLEGSRGRQAITVTELPYGVGPEKVIEK
ITDEVNKSKRLTGIADVKDLTDRENGTRLVIECKVGVNPQPLLADLYRLTPLEQSFGINN
LVLVDGQPQTLGLKQLLDVFLAHRYEVVTRRTRYRRRKREERLHLVEGLLLALLDIDKVI
RLIRNSDNAAEAKEGLMKRFKLSEIQATYILDTPLRRLTKYDKLELEEEQERLREEIAEL
TKILKDDGVLKRVVSNELAKIAKDFRTERRTALIDGDLKEVLAASQPAGPREVADDPCQV
ILSATGLVARTAAESEEAPEGRRRNGRVKHDAVAALVHSTARSQVLLISSRGRAFKTDVL
PLPVLPEQAGTVSLRGGMAARELVPLDKGERVVGIAPLGEQAADSPGLALGTRQGVVKVC
APEWPVRADEFEVISLKDGDELVGATWLTNRNETLAFVASDASLLRLSVSLVRPQGLKSG
GMAGIKLTDGAHVVFFGAVRTDDPERGEPMVVTATGTTVKMTPFAEYPAKGRATGGVRAH
RFLKGEDALSVAWIGPRPAGAACNGDPVELPEPVDRRDGSGAAHPGPDFVGHLIERG
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaagacacccacgaccagggtcgatcccgccgccttcgaccaggcgggc
gcccaggtcttcgagaacccggtcaagaccgagatggaggactcgtacctcgagtacgcg
tactcggtcatccactcgcgcgccctgccggacgcgcgggacggcttgaagccggtgcac
cgccggatcctgttctcgatgaacgaggccggctaccgcccgtcgcacgcgtacgtgaag
tcctcccgcgtcgtcggcgacgtgatgggccgctaccacccccacggcgacacggcgatc
tacgacgcgatggtccgcctggcacaggacttctcgatgaacgcgccactcgtggacggg
cacgggaacttcggcagcccggacgacggcccggcggcttcgaggtactgcgtcgtcggc
gacacgcggatccggctcgcggacggctcgagcccgcgcatcgccgacgtggtggatctg
cccgccgacagcgaggccgccgcggacttcgaggtcctggacaaggacggcaagccggtc
cgggtgacgaaggtgttcaactccggcgtccaccccacgatccggacgaccaccaagtcg
ggtttctcgcttcggggcagcgaaaaccacctggtcctgtgtctggaggcgccgctggga
gtgccgctgttccagtggcggcgcctggacgagctgaagcccggcgcggtcgtggccgtc
gcacgtaacgcctggctgcaggtagtgcccacggctcgcgagtacatgctcggcgtgctc
gccggtgcgtgggtttcggaaggccgggcgagcgagaaccgggcgggcttcaacaacacg
gacgagcacttcttcggcgaggtcctgcacgcctacgaccaggtcgtaggcgggccgcga
tatgtatcggcgcggcgcacccggcgggaccgcaagcaggtgcacgagctggacatccag
gactacgccggtggcatggcggcgttccgggagagcccgctggccgagctgatcggtcac
caggccagggacaagttcgtgcccgagttcgtctggcacggcggctggggcgtcaagcgc
gcgttcctgatggcgctgttcgagggcgacggcggcccgcgcctcgctgtggacggcttc
aacgtccaatacaccagctacagcgagcgcctgaccagcgaggttcaggagctgcttgcc
gagttcggggtcatcgcccggcattgccggtacacgcgaacgagtggcgcagtcgagcac
cggctcgtgatctccgggcttcgcaacgtacgggcgttcgtggagcgtgtcggcttcctc
gagacgaagcgggcgaaggtgaccgagttgttgcggcgctcggtcctgagtccgcaccgg
ctcagccaggacaaggtcccgttcgtcgcggactacgtgcggggcgcgctcgacttcgat
cgccgcggcagcgaccggaagtggctgacccagcacaatttcgaccgcgtcgagcggtgg
gagaccgagcggctgcgaatcatcgaccggatcaaggacaccgaggtactggccacgatc
ctgccggtgatggattccggctaccgcttcgaggaggtcaccgaggtctcggcagccgaa
ccggcggaggtctattcggtccgggtcgagtccgacgaccactccttcctcgccggcggg
ttcgtgaaccacaacaccgaagcccggatgtcgcccgaggcgatgctgctcgtcggggag
ctgggcgaggagacggtcgacttccggcccaactacgacgggtcgctgcaggagccgtcg
gtgctgccggcggcgtacccgaacctgctggtcaacggtacgtccgggatcgcggtcggg
atggcgacgaacatgatcccgcacaacatgggcgaggtcatcggcgccgcccgctggctg
atcaaccatccgaacgcctcgctggacaagctgatggagttcgtgcccggccccgacctg
ccgaccggcggcatgctgctgggcctggacgaggtgcgcaaggcctacgagaccggccgc
ggcgtggtgcggatgcgggcgaaggtccagatcggcccgctggagggcagccgcggccgg
caggccatcacggtcaccgagctgccgtacggcgtcgggccggagaaggtgatcgagaag
atcaccgacgaggtcaacaagtccaagcggctcaccgggatcgcggacgtcaaggacctc
accgaccgcgagaacgggacccgcctcgtcatcgagtgcaaggtcggggtgaacccgcag
ccgctgctggcggacctgtaccggctcacgccgctggagcagtcgttcggcatcaacaac
ctggtgctcgtcgacggccagccgcagacgctggggctcaagcagctgctcgacgtgttc
ctggcccaccgctacgaggtcgtcacccgccggaccaggtaccgccggcgcaagcgcgag
gagcggctgcacctggtcgagggcctgctgctggcgctgctggacatcgacaaggtgatc
cgcctgatccgcaacagcgacaacgccgccgaggccaaggaaggcctgatgaagcggttc
aagctctcggagatccaggcgacgtacatcctggacaccccgctgcggcggctgaccaag
tacgacaagctcgagctggaggaggagcaggagcggctgcgcgaggagatcgcggagctg
accaagatcctcaaggacgatggcgtgctgaagcgggtcgtgtccaacgagctggccaag
atcgccaaggacttccgcaccgagcggcgcacggcgctgatcgacggtgacctcaaggag
gtgctggcggcgtcgcagccggctggtccccgcgaggtcgccgacgacccgtgccaggtg
atcctgtcggccaccggcctggtcgcgcggaccgcggcggagtcggaggaggcgccggaa
gggcggcggcgcaacggccgcgtcaagcacgacgcggtggcggcgctcgtgcattcgacc
gcacgcagccaggtgctgctgatcagcagccgtgggcgcgccttcaagaccgacgtgctg
ccgttgccggtcctgccggagcaggcgggcacggtgtcgctgcgcggcgggatggccgcg
cgggagctggtgccgctggacaagggcgagcgggtcgtcggcatcgcgccgctgggcgag
caggcggcggactcgccggggctcgcgctcggcacgcgccagggcgtggtgaaggtgtgc
gcgccggagtggccggtgcgggcggacgagttcgaggtcatcagcctcaaggacggggac
gaactggtcggtgcgacctggctgaccaacaggaacgagacgctggcgttcgtggcgtcc
gacgcgtcgctgctgaggttgtcggtgtcgctggtgcggccgcaggggctcaagagcggc
gggatggcgggcatcaagctcaccgacggggcacacgtggtgttcttcggcgcggtccgc
acggacgacccggaacgcggcgagccgatggtggtcacggccaccggcacgacggtcaag
atgacgccgttcgcggagtaccccgcgaagggccgggcgaccggcggtgtccgcgcacac
cggttcctcaagggcgaggacgcgttgtcggtggcgtggatcgggccgcgccccgccggg
gcggcgtgcaacggcgacccggtggagctccccgagccggtcgaccgccgcgacggctcc
ggggcagcgcacccgggcccggacttcgtcgggcacctgatcgaacgtggctga
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